RNA–Protein interactions for RNA: ENST00000556939.5

PGF-207, Transcript of placental growth factor, humanhuman

TSL 2

Gene PGF, Length 1,125 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGF-207ENST00000556939 NISCHQ9Y2I1 1504 aa41.07■■■■■ 4.16
PGF-207ENST00000556939 CCDC180Q9P1Z9 1646 aa36.55■■■■□ 3.44
PGF-207ENST00000556939 ABCC9O60706 1549 aa36.19■■■■□ 3.38
PGF-207ENST00000556939 RB1CC1Q8TDY2 1594 aa34.57■■■■□ 3.12
PGF-207ENST00000556939 DCAF8L2P0C7V8 631 aa34.5■■■■□ 3.11
PGF-207ENST00000556939 NACADO15069 1562 aa34.45■■■■□ 3.11
PGF-207ENST00000556939 ZCCHC6Q5VYS8 1495 aaKnown RBP34.14■■■■□ 3.06
PGF-207ENST00000556939 MYO15BQ96JP2 1530 aa34.13■■■■□ 3.05
PGF-207ENST00000556939 DCAF1Q9Y4B6 1507 aa33.89■■■■□ 3.02
PGF-207ENST00000556939 UNC13AQ9UPW8 1703 aa33.87■■■■□ 3.01
PGF-207ENST00000556939 PABPN1Q86U42 306 aaKnown RBP eCLIP33.83■■■■□ 3.01
PGF-207ENST00000556939 BICRAQ9NZM4 1560 aa33.64■■■□□ 2.98
PGF-207ENST00000556939 DNAJC5BQ9UF47 199 aa33.62■■■□□ 2.97
PGF-207ENST00000556939 SCRIBQ14160 1630 aa33.43■■■□□ 2.94
PGF-207ENST00000556939 SHROOM4Q9ULL8 1493 aa33.08■■■□□ 2.89
PGF-207ENST00000556939 EIF4G1Q04637 1599 aaKnown RBP32.74■■■□□ 2.83
PGF-207ENST00000556939 CC2D2AQ9P2K1 1620 aa32.69■■■□□ 2.82
PGF-207ENST00000556939 CECR2Q9BXF3 1484 aa32.52■■■□□ 2.8
PGF-207ENST00000556939 SMARCA4P51532 1647 aa31.92■■■□□ 2.7
PGF-207ENST00000556939 NCAPD3P42695 1498 aa31.84■■■□□ 2.69
PGF-207ENST00000556939 ATAD2BQ9ULI0 1458 aa31.84■■■□□ 2.69
PGF-207ENST00000556939 BAZ1AQ9NRL2 1556 aaPredicted RBP31.79■■■□□ 2.68
PGF-207ENST00000556939 SMARCA2P51531 1590 aa31.72■■■□□ 2.67
PGF-207ENST00000556939 MROH2BQ7Z745 1585 aa31.69■■■□□ 2.66
PGF-207ENST00000556939 HMGXB3Q12766 1538 aa31.62■■■□□ 2.65
PGF-207ENST00000556939 PEG3Q9GZU2 1588 aa31.58■■■□□ 2.65
PGF-207ENST00000556939 BAZ1BQ9UIG0 1483 aaKnown RBP31.52■■■□□ 2.64
PGF-207ENST00000556939 WIZO95785 1651 aa31.33■■■□□ 2.61
PGF-207ENST00000556939 NESP48681 1621 aa31.27■■■□□ 2.6
PGF-207ENST00000556939 RSF1Q96T23 1441 aaPredicted RBP31.21■■■□□ 2.59
PGF-207ENST00000556939 ERCC6Q03468 1493 aa31.14■■■□□ 2.58
PGF-207ENST00000556939 LAMC3Q9Y6N6 1575 aa31.01■■■□□ 2.56
PGF-207ENST00000556939 CADPSQ9ULU8 1353 aa30.92■■■□□ 2.54
PGF-207ENST00000556939 TOP2AP11388 1531 aaKnown RBP30.91■■■□□ 2.54
PGF-207ENST00000556939 CUX2O14529 1486 aa30.9■■■□□ 2.54
PGF-207ENST00000556939 PDS5BQ9NTI5 1447 aa30.82■■■□□ 2.52
PGF-207ENST00000556939 KIF21AQ7Z4S6 1674 aa30.82■■■□□ 2.52
PGF-207ENST00000556939 THOC2Q8NI27 1593 aaKnown RBP30.79■■■□□ 2.52
PGF-207ENST00000556939 CFTRP13569 1480 aa30.66■■■□□ 2.5
PGF-207ENST00000556939 CCDC88BA6NC98 1476 aa30.62■■■□□ 2.49
PGF-207ENST00000556939 FANCD2Q9BXW9 1451 aa30.57■■■□□ 2.48
PGF-207ENST00000556939 MRC2Q9UBG0 1479 aa30.55■■■□□ 2.48
PGF-207ENST00000556939 CEP164Q9UPV0 1460 aa30.52■■■□□ 2.48
PGF-207ENST00000556939 WDR62O43379 1518 aa30.46■■■□□ 2.47
PGF-207ENST00000556939 DNAJC5Q9H3Z4 198 aa30.4■■■□□ 2.46
PGF-207ENST00000556939 PRDM2Q13029 1718 aa30.33■■■□□ 2.45
PGF-207ENST00000556939 URB2Q14146 1524 aaKnown RBP30.32■■■□□ 2.44
PGF-207ENST00000556939 SUPT5HO00267 1087 aaKnown RBP30.23■■■□□ 2.43
PGF-207ENST00000556939 TOPBP1Q92547 1522 aa30.05■■■□□ 2.4
PGF-207ENST00000556939 DNMBPQ6XZF7 1577 aa29.94■■■□□ 2.38
PGF-207ENST00000556939 ABCC8Q09428 1581 aa29.93■■■□□ 2.38
PGF-207ENST00000556939 IFT140Q96RY7 1462 aa29.88■■■□□ 2.37
PGF-207ENST00000556939 ZNF608Q9ULD9 1512 aaPredicted RBP29.88■■■□□ 2.37
PGF-207ENST00000556939 POLA1P09884 1462 aaPredicted RBP29.78■■■□□ 2.36
PGF-207ENST00000556939 TARBP1Q13395 1621 aaKnown RBP29.74■■■□□ 2.35
PGF-207ENST00000556939 CUX1P39880 1505 aa29.74■■■□□ 2.35
PGF-207ENST00000556939 RAD54L2Q9Y4B4 1467 aa29.71■■■□□ 2.35
PGF-207ENST00000556939 EIF4G3O43432 1585 aaKnown RBP29.67■■■□□ 2.34
PGF-207ENST00000556939 AQRO60306 1485 aaKnown RBP eCLIP29.67■■■□□ 2.348e-7■■■■■ 28.4
PGF-207ENST00000556939 FGD5Q6ZNL6 1462 aa29.66■■■□□ 2.34
PGF-207ENST00000556939 SOGA1O94964 1423 aa29.64■■■□□ 2.34
PGF-207ENST00000556939 OSCARQ8IYS5 282 aa29.61■■■□□ 2.33
PGF-207ENST00000556939 TDRD9Q8NDG6 1382 aaKnown RBP29.56■■■□□ 2.32
PGF-207ENST00000556939 WDR97A6NE52 1622 aa29.4■■■□□ 2.3
PGF-207ENST00000556939 WRNQ14191 1432 aaPredicted RBP eCLIP29.39■■■□□ 2.3
PGF-207ENST00000556939 SYNJ1O43426 1573 aa29.38■■■□□ 2.29
PGF-207ENST00000556939 CHD1O14646 1710 aa29.37■■■□□ 2.29
PGF-207ENST00000556939 FBLN2P98095 1184 aa29.35■■■□□ 2.29
PGF-207ENST00000556939 SNAPC4Q5SXM2 1469 aa29.35■■■□□ 2.29
PGF-207ENST00000556939 TOP2BQ02880 1626 aa29.34■■■□□ 2.29
PGF-207ENST00000556939 BIVM-ERCC5R4GMW8 1640 aa29.34■■■□□ 2.29
PGF-207ENST00000556939 ABCA10Q8WWZ4 1543 aa29.33■■■□□ 2.29
PGF-207ENST00000556939 GRIN2BQ13224 1484 aa29.3■■■□□ 2.28
PGF-207ENST00000556939 TRIM41Q8WV44 630 aa29.3■■■□□ 2.28
PGF-207ENST00000556939 GAPVD1Q14C86 1478 aa29.29■■■□□ 2.28
PGF-207ENST00000556939 ABCA5Q8WWZ7 1642 aa29.24■■■□□ 2.27
PGF-207ENST00000556939 MAGI1Q96QZ7 1491 aaPredicted RBP29.23■■■□□ 2.27
PGF-207ENST00000556939 PBRM1Q86U86 1689 aa29.22■■■□□ 2.27
PGF-207ENST00000556939 RIMBP3CA6NJZ7 1639 aa29.2■■■□□ 2.26
PGF-207ENST00000556939 RIMBP3BA6NNM3 1639 aa29.2■■■□□ 2.26
PGF-207ENST00000556939 RIMBP3Q9UFD9 1639 aa29.2■■■□□ 2.26
PGF-207ENST00000556939 CHMP7Q8WUX9 453 aaPredicted RBP29.19■■■□□ 2.26
PGF-207ENST00000556939 ARHGEF11O15085 1522 aa29.15■■■□□ 2.26
PGF-207ENST00000556939 SYNJ2O15056 1496 aa29.14■■■□□ 2.26
PGF-207ENST00000556939 CLASP1Q7Z460 1538 aa29.04■■■□□ 2.24
PGF-207ENST00000556939 ADAMTS12P58397 1594 aa28.98■■■□□ 2.23
PGF-207ENST00000556939 ERICH3Q5RHP9 1530 aa28.94■■■□□ 2.22
PGF-207ENST00000556939 GRIN2AQ12879 1464 aa28.94■■■□□ 2.22
PGF-207ENST00000556939 CYB5RLQ6IPT4 315 aa28.94■■■□□ 2.22
PGF-207ENST00000556939 ARAP1Q96P48 1450 aa28.92■■■□□ 2.22
PGF-207ENST00000556939 FHAD1B1AJZ9 1412 aa28.92■■■□□ 2.22
PGF-207ENST00000556939 CEP170Q5SW79 1584 aa28.84■■■□□ 2.21
PGF-207ENST00000556939 NUP160Q12769 1436 aa28.83■■■□□ 2.21
PGF-207ENST00000556939 KIF27Q86VH2 1401 aa28.77■■■□□ 2.2
PGF-207ENST00000556939 IGF1RP08069 1367 aa28.77■■■□□ 2.2
PGF-207ENST00000556939 ERCC6L2Q5T890 1561 aa28.71■■■□□ 2.19
PGF-207ENST00000556939 SHROOM2Q13796 1616 aa28.63■■■□□ 2.17
PGF-207ENST00000556939 CUL7Q14999 1698 aa28.59■■■□□ 2.17
PGF-207ENST00000556939 CARMIL1Q5VZK9 1371 aa28.57■■■□□ 2.16
PGF-207ENST00000556939 RUSC2Q8N2Y8 1516 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms