RNA–Protein interactions for RNA: ENST00000556565.5

TUBB3-212, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-212ENST00000556565 NISCHQ9Y2I1 1504 aa43.04■■■■■ 4.48
TUBB3-212ENST00000556565 CCDC180Q9P1Z9 1646 aa38.34■■■■□ 3.73
TUBB3-212ENST00000556565 ABCC9O60706 1549 aa37.62■■■■□ 3.61
TUBB3-212ENST00000556565 RB1CC1Q8TDY2 1594 aa36.14■■■■□ 3.38
TUBB3-212ENST00000556565 NACADO15069 1562 aa36.06■■■■□ 3.36
TUBB3-212ENST00000556565 DCAF8L2P0C7V8 631 aa35.93■■■■□ 3.34
TUBB3-212ENST00000556565 ZCCHC6Q5VYS8 1495 aaKnown RBP35.85■■■■□ 3.33
TUBB3-212ENST00000556565 MYO15BQ96JP2 1530 aa35.82■■■■□ 3.32
TUBB3-212ENST00000556565 DCAF1Q9Y4B6 1507 aa35.62■■■■□ 3.29
TUBB3-212ENST00000556565 UNC13AQ9UPW8 1703 aa35.3■■■■□ 3.24
TUBB3-212ENST00000556565 PABPN1Q86U42 306 aaKnown RBP eCLIP35.11■■■■□ 3.21
TUBB3-212ENST00000556565 BICRAQ9NZM4 1560 aa35.06■■■■□ 3.2
TUBB3-212ENST00000556565 SCRIBQ14160 1630 aa34.98■■■■□ 3.19
TUBB3-212ENST00000556565 SHROOM4Q9ULL8 1493 aa34.7■■■■□ 3.15
TUBB3-212ENST00000556565 DNAJC5BQ9UF47 199 aa34.62■■■■□ 3.13
TUBB3-212ENST00000556565 EIF4G1Q04637 1599 aaKnown RBP34.15■■■■□ 3.06
TUBB3-212ENST00000556565 CC2D2AQ9P2K1 1620 aa34.02■■■■□ 3.04
TUBB3-212ENST00000556565 CECR2Q9BXF3 1484 aa33.82■■■■□ 3.01
TUBB3-212ENST00000556565 SMARCA4P51532 1647 aa33.44■■■□□ 2.94
TUBB3-212ENST00000556565 BAZ1AQ9NRL2 1556 aaPredicted RBP33.38■■■□□ 2.93
TUBB3-212ENST00000556565 ATAD2BQ9ULI0 1458 aa33.28■■■□□ 2.92
TUBB3-212ENST00000556565 NCAPD3P42695 1498 aa33.27■■■□□ 2.92
TUBB3-212ENST00000556565 SMARCA2P51531 1590 aa33.23■■■□□ 2.91
TUBB3-212ENST00000556565 MROH2BQ7Z745 1585 aa33.17■■■□□ 2.9
TUBB3-212ENST00000556565 HMGXB3Q12766 1538 aa33.12■■■□□ 2.89
TUBB3-212ENST00000556565 PEG3Q9GZU2 1588 aa33.11■■■□□ 2.89
TUBB3-212ENST00000556565 BAZ1BQ9UIG0 1483 aaKnown RBP33■■■□□ 2.87
TUBB3-212ENST00000556565 WIZO95785 1651 aa32.8■■■□□ 2.84
TUBB3-212ENST00000556565 RSF1Q96T23 1441 aaPredicted RBP32.74■■■□□ 2.83
TUBB3-212ENST00000556565 NESP48681 1621 aa32.52■■■□□ 2.8
TUBB3-212ENST00000556565 TOP2AP11388 1531 aaKnown RBP32.47■■■□□ 2.79
TUBB3-212ENST00000556565 ERCC6Q03468 1493 aa32.44■■■□□ 2.78
TUBB3-212ENST00000556565 LAMC3Q9Y6N6 1575 aa32.42■■■□□ 2.78
TUBB3-212ENST00000556565 CADPSQ9ULU8 1353 aa32.29■■■□□ 2.76
TUBB3-212ENST00000556565 PDS5BQ9NTI5 1447 aa32.19■■■□□ 2.74
TUBB3-212ENST00000556565 CUX2O14529 1486 aa32.16■■■□□ 2.74
TUBB3-212ENST00000556565 KIF21AQ7Z4S6 1674 aa32.13■■■□□ 2.73
TUBB3-212ENST00000556565 CFTRP13569 1480 aa32.09■■■□□ 2.73
TUBB3-212ENST00000556565 THOC2Q8NI27 1593 aaKnown RBP32.08■■■□□ 2.73
TUBB3-212ENST00000556565 CCDC88BA6NC98 1476 aa32.06■■■□□ 2.72
TUBB3-212ENST00000556565 FANCD2Q9BXW9 1451 aa31.94■■■□□ 2.7
TUBB3-212ENST00000556565 CEP164Q9UPV0 1460 aa31.91■■■□□ 2.7
TUBB3-212ENST00000556565 MRC2Q9UBG0 1479 aa31.91■■■□□ 2.7
TUBB3-212ENST00000556565 PRDM2Q13029 1718 aa31.82■■■□□ 2.68
TUBB3-212ENST00000556565 WDR62O43379 1518 aa31.81■■■□□ 2.68
TUBB3-212ENST00000556565 SUPT5HO00267 1087 aaKnown RBP31.76■■■□□ 2.67
TUBB3-212ENST00000556565 URB2Q14146 1524 aaKnown RBP31.64■■■□□ 2.66
TUBB3-212ENST00000556565 TOPBP1Q92547 1522 aa31.41■■■□□ 2.62
TUBB3-212ENST00000556565 ABCC8Q09428 1581 aa31.38■■■□□ 2.61
TUBB3-212ENST00000556565 DNMBPQ6XZF7 1577 aa31.38■■■□□ 2.61
TUBB3-212ENST00000556565 DNAJC5Q9H3Z4 198 aa31.26■■■□□ 2.59
TUBB3-212ENST00000556565 IFT140Q96RY7 1462 aa31.25■■■□□ 2.59
TUBB3-212ENST00000556565 POLA1P09884 1462 aaPredicted RBP31.14■■■□□ 2.58
TUBB3-212ENST00000556565 CUX1P39880 1505 aa31.14■■■□□ 2.57
TUBB3-212ENST00000556565 ZNF608Q9ULD9 1512 aaPredicted RBP31.12■■■□□ 2.57
TUBB3-212ENST00000556565 TARBP1Q13395 1621 aaKnown RBP31.09■■■□□ 2.57
TUBB3-212ENST00000556565 FGD5Q6ZNL6 1462 aa31.05■■■□□ 2.56
TUBB3-212ENST00000556565 EIF4G3O43432 1585 aaKnown RBP31.01■■■□□ 2.56
TUBB3-212ENST00000556565 RAD54L2Q9Y4B4 1467 aa31■■■□□ 2.55
TUBB3-212ENST00000556565 SOGA1O94964 1423 aa30.98■■■□□ 2.55
TUBB3-212ENST00000556565 AQRO60306 1485 aaKnown RBP eCLIP30.91■■■□□ 2.54
TUBB3-212ENST00000556565 WRNQ14191 1432 aaPredicted RBP eCLIP30.88■■■□□ 2.53
TUBB3-212ENST00000556565 WDR97A6NE52 1622 aa30.84■■■□□ 2.53
TUBB3-212ENST00000556565 TDRD9Q8NDG6 1382 aaKnown RBP30.83■■■□□ 2.53
TUBB3-212ENST00000556565 TOP2BQ02880 1626 aa30.83■■■□□ 2.53
TUBB3-212ENST00000556565 BIVM-ERCC5R4GMW8 1640 aa30.83■■■□□ 2.53
TUBB3-212ENST00000556565 SYNJ1O43426 1573 aa30.83■■■□□ 2.53
TUBB3-212ENST00000556565 ABCA10Q8WWZ4 1543 aa30.74■■■□□ 2.51
TUBB3-212ENST00000556565 OSCARQ8IYS5 282 aa30.74■■■□□ 2.51
TUBB3-212ENST00000556565 GRIN2BQ13224 1484 aa30.66■■■□□ 2.5
TUBB3-212ENST00000556565 SNAPC4Q5SXM2 1469 aa30.65■■■□□ 2.5
TUBB3-212ENST00000556565 ABCA5Q8WWZ7 1642 aa30.65■■■□□ 2.5
TUBB3-212ENST00000556565 GAPVD1Q14C86 1478 aa30.64■■■□□ 2.5
TUBB3-212ENST00000556565 CHD1O14646 1710 aa30.62■■■□□ 2.49
TUBB3-212ENST00000556565 MAGI1Q96QZ7 1491 aaPredicted RBP30.6■■■□□ 2.49
TUBB3-212ENST00000556565 PBRM1Q86U86 1689 aa30.59■■■□□ 2.49
TUBB3-212ENST00000556565 FBLN2P98095 1184 aa30.53■■■□□ 2.48
TUBB3-212ENST00000556565 SYNJ2O15056 1496 aa30.48■■■□□ 2.47
TUBB3-212ENST00000556565 CHMP7Q8WUX9 453 aaPredicted RBP30.43■■■□□ 2.46
TUBB3-212ENST00000556565 ADAMTS12P58397 1594 aa30.38■■■□□ 2.45
TUBB3-212ENST00000556565 ERICH3Q5RHP9 1530 aa30.37■■■□□ 2.45
TUBB3-212ENST00000556565 RIMBP3CA6NJZ7 1639 aa30.32■■■□□ 2.44
TUBB3-212ENST00000556565 RIMBP3BA6NNM3 1639 aa30.32■■■□□ 2.44
TUBB3-212ENST00000556565 RIMBP3Q9UFD9 1639 aa30.32■■■□□ 2.44
TUBB3-212ENST00000556565 CLASP1Q7Z460 1538 aa30.32■■■□□ 2.44
TUBB3-212ENST00000556565 ARHGEF11O15085 1522 aa30.3■■■□□ 2.44
TUBB3-212ENST00000556565 FHAD1B1AJZ9 1412 aa30.29■■■□□ 2.44
TUBB3-212ENST00000556565 GRIN2AQ12879 1464 aa30.27■■■□□ 2.44
TUBB3-212ENST00000556565 KIF27Q86VH2 1401 aa30.23■■■□□ 2.43
TUBB3-212ENST00000556565 TRIM41Q8WV44 630 aa30.19■■■□□ 2.42
TUBB3-212ENST00000556565 NUP160Q12769 1436 aa30.15■■■□□ 2.42
TUBB3-212ENST00000556565 CEP170Q5SW79 1584 aa30.14■■■□□ 2.42
TUBB3-212ENST00000556565 IGF1RP08069 1367 aa30.11■■■□□ 2.41
TUBB3-212ENST00000556565 CUL7Q14999 1698 aa30.07■■■□□ 2.41
TUBB3-212ENST00000556565 ARAP1Q96P48 1450 aa30.06■■■□□ 2.4
TUBB3-212ENST00000556565 CYB5RLQ6IPT4 315 aa29.96■■■□□ 2.39
TUBB3-212ENST00000556565 SHROOM2Q13796 1616 aa29.93■■■□□ 2.38
TUBB3-212ENST00000556565 CARMIL1Q5VZK9 1371 aa29.93■■■□□ 2.38
TUBB3-212ENST00000556565 RUSC2Q8N2Y8 1516 aa29.93■■■□□ 2.38
TUBB3-212ENST00000556565 ERCC6L2Q5T890 1561 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms