RNA–Protein interactions for RNA: ENST00000556506.1

PSMA6-214, Transcript of proteasome subunit alpha 6, humanhuman

TSL 5 BASIC

Gene PSMA6, Length 763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-214ENST00000556506 AEBP2Q6ZN18 517 aaPredicted RBP16.83■□□□□ 0.28
PSMA6-214ENST00000556506 CHIC1Q5VXU3 224 aa16.5■□□□□ 0.23
PSMA6-214ENST00000556506 NISCHQ9Y2I1 1504 aa16.29■□□□□ 0.2
PSMA6-214ENST00000556506 PHF23Q9BUL5 403 aaPredicted RBP14.62□□□□□ -0.07
PSMA6-214ENST00000556506 CCDC180Q9P1Z9 1646 aa14.29□□□□□ -0.12
PSMA6-214ENST00000556506 SENP3Q9H4L4 574 aaPredicted RBP14.07□□□□□ -0.16
PSMA6-214ENST00000556506 ABCC9O60706 1549 aa13.69□□□□□ -0.22
PSMA6-214ENST00000556506 ZCCHC6Q5VYS8 1495 aaKnown RBP13.64□□□□□ -0.23
PSMA6-214ENST00000556506 DCAF1Q9Y4B6 1507 aa13.5□□□□□ -0.25
PSMA6-214ENST00000556506 DCAF8L2P0C7V8 631 aa13.44□□□□□ -0.26
PSMA6-214ENST00000556506 MYO15BQ96JP2 1530 aa13.44□□□□□ -0.26
PSMA6-214ENST00000556506 PLPPR3Q6T4P5 718 aa13.41□□□□□ -0.26
PSMA6-214ENST00000556506 NACADO15069 1562 aa13.38□□□□□ -0.27
PSMA6-214ENST00000556506 RB1CC1Q8TDY2 1594 aa13.29□□□□□ -0.28
PSMA6-214ENST00000556506 FOXD1Q16676 465 aa13.16□□□□□ -0.3
PSMA6-214ENST00000556506 SCRIBQ14160 1630 aa13.07□□□□□ -0.32
PSMA6-214ENST00000556506 SHROOM4Q9ULL8 1493 aa13.05□□□□□ -0.32
PSMA6-214ENST00000556506 UNC13AQ9UPW8 1703 aa13.02□□□□□ -0.32
PSMA6-214ENST00000556506 BICRAQ9NZM4 1560 aa12.94□□□□□ -0.34
PSMA6-214ENST00000556506 PABPN1Q86U42 306 aaKnown RBP eCLIP12.88□□□□□ -0.354e-6■□□□□ 9.3
PSMA6-214ENST00000556506 PPP6R1Q9UPN7 881 aa12.86□□□□□ -0.35
PSMA6-214ENST00000556506 ADRA2BP18089 450 aa12.83□□□□□ -0.36
PSMA6-214ENST00000556506 CECR2Q9BXF3 1484 aa12.68□□□□□ -0.38
PSMA6-214ENST00000556506 BAZ1AQ9NRL2 1556 aaPredicted RBP12.58□□□□□ -0.4
PSMA6-214ENST00000556506 MROH2BQ7Z745 1585 aa12.57□□□□□ -0.4
PSMA6-214ENST00000556506 RSF1Q96T23 1441 aaPredicted RBP12.56□□□□□ -0.4
PSMA6-214ENST00000556506 SMARCA4P51532 1647 aa12.55□□□□□ -0.4
PSMA6-214ENST00000556506 EIF4G1Q04637 1599 aaKnown RBP12.53□□□□□ -0.4
PSMA6-214ENST00000556506 SUPT5HO00267 1087 aaKnown RBP12.46□□□□□ -0.41
PSMA6-214ENST00000556506 PEG3Q9GZU2 1588 aa12.45□□□□□ -0.42
PSMA6-214ENST00000556506 WIZO95785 1651 aa12.45□□□□□ -0.42
PSMA6-214ENST00000556506 ATAD2BQ9ULI0 1458 aa12.43□□□□□ -0.42
PSMA6-214ENST00000556506 CC2D2AQ9P2K1 1620 aa12.4□□□□□ -0.42
PSMA6-214ENST00000556506 NCAPD3P42695 1498 aa12.38□□□□□ -0.43
PSMA6-214ENST00000556506 SMARCA2P51531 1590 aa12.38□□□□□ -0.43
PSMA6-214ENST00000556506 PIAS4Q8N2W9 510 aaPredicted RBP12.37□□□□□ -0.43
PSMA6-214ENST00000556506 DNAJC5BQ9UF47 199 aa12.35□□□□□ -0.43
PSMA6-214ENST00000556506 TOP2AP11388 1531 aaKnown RBP12.32□□□□□ -0.44
PSMA6-214ENST00000556506 HMGXB3Q12766 1538 aa12.31□□□□□ -0.44
PSMA6-214ENST00000556506 BAZ1BQ9UIG0 1483 aaKnown RBP12.3□□□□□ -0.44
PSMA6-214ENST00000556506 CCDC88BA6NC98 1476 aa12.21□□□□□ -0.46
PSMA6-214ENST00000556506 CADPSQ9ULU8 1353 aa12.03□□□□□ -0.48
PSMA6-214ENST00000556506 CFTRP13569 1480 aa12.02□□□□□ -0.48
PSMA6-214ENST00000556506 NESP48681 1621 aa11.97□□□□□ -0.49
PSMA6-214ENST00000556506 LAMC3Q9Y6N6 1575 aa11.95□□□□□ -0.5
PSMA6-214ENST00000556506 MSH5O43196 834 aa11.93□□□□□ -0.5
PSMA6-214ENST00000556506 PRDM2Q13029 1718 aa11.9□□□□□ -0.5
PSMA6-214ENST00000556506 PPP4R3CPQ6ZMV5 832 aa11.9□□□□□ -0.5
PSMA6-214ENST00000556506 KCNA4P22459 653 aa11.87□□□□□ -0.51
PSMA6-214ENST00000556506 FANCD2Q9BXW9 1451 aa11.87□□□□□ -0.51
PSMA6-214ENST00000556506 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
PSMA6-214ENST00000556506 ABCC8Q09428 1581 aa11.83□□□□□ -0.52
PSMA6-214ENST00000556506 KIF21AQ7Z4S6 1674 aa11.8□□□□□ -0.52
PSMA6-214ENST00000556506 WRNQ14191 1432 aaPredicted RBP eCLIP11.79□□□□□ -0.52
PSMA6-214ENST00000556506 CEP164Q9UPV0 1460 aa11.79□□□□□ -0.52
PSMA6-214ENST00000556506 CUX1P39880 1505 aa11.76□□□□□ -0.53
PSMA6-214ENST00000556506 SYNJ1O43426 1573 aa11.76□□□□□ -0.53
PSMA6-214ENST00000556506 URB2Q14146 1524 aaKnown RBP11.75□□□□□ -0.53
PSMA6-214ENST00000556506 TRIM41Q8WV44 630 aa11.74□□□□□ -0.53
PSMA6-214ENST00000556506 TOP2BQ02880 1626 aa11.74□□□□□ -0.53
PSMA6-214ENST00000556506 BIVM-ERCC5R4GMW8 1640 aa11.73□□□□□ -0.53
PSMA6-214ENST00000556506 TOPBP1Q92547 1522 aa11.72□□□□□ -0.53
PSMA6-214ENST00000556506 ERCC6Q03468 1493 aa11.72□□□□□ -0.53
PSMA6-214ENST00000556506 MRC2Q9UBG0 1479 aa11.72□□□□□ -0.53
PSMA6-214ENST00000556506 DNMBPQ6XZF7 1577 aa11.71□□□□□ -0.53
PSMA6-214ENST00000556506 THOC2Q8NI27 1593 aaKnown RBP11.7□□□□□ -0.54
PSMA6-214ENST00000556506 WDR62O43379 1518 aa11.69□□□□□ -0.54
PSMA6-214ENST00000556506 FGD5Q6ZNL6 1462 aa11.66□□□□□ -0.54
PSMA6-214ENST00000556506 POLA1P09884 1462 aaPredicted RBP11.64□□□□□ -0.55
PSMA6-214ENST00000556506 MAPK8IP2Q13387 824 aaPredicted RBP11.62□□□□□ -0.55
PSMA6-214ENST00000556506 CUX2O14529 1486 aa11.62□□□□□ -0.55
PSMA6-214ENST00000556506 RAD54L2Q9Y4B4 1467 aa11.61□□□□□ -0.55
PSMA6-214ENST00000556506 SOGA1O94964 1423 aa11.6□□□□□ -0.55
PSMA6-214ENST00000556506 RUSC2Q8N2Y8 1516 aa11.58□□□□□ -0.56
PSMA6-214ENST00000556506 TARBP1Q13395 1621 aaKnown RBP11.57□□□□□ -0.56
PSMA6-214ENST00000556506 ABCA10Q8WWZ4 1543 aa11.57□□□□□ -0.56
PSMA6-214ENST00000556506 IFT140Q96RY7 1462 aa11.55□□□□□ -0.56
PSMA6-214ENST00000556506 SCAF1Q9H7N4 1312 aaKnown RBP11.55□□□□□ -0.56
PSMA6-214ENST00000556506 WDR97A6NE52 1622 aa11.54□□□□□ -0.56
PSMA6-214ENST00000556506 NCBP3Q53F19 620 aaKnown RBP11.52□□□□□ -0.57
PSMA6-214ENST00000556506 EEA1Q15075 1411 aa11.52□□□□□ -0.57
PSMA6-214ENST00000556506 KIF27Q86VH2 1401 aa11.52□□□□□ -0.57
PSMA6-214ENST00000556506 TDRD9Q8NDG6 1382 aaKnown RBP11.51□□□□□ -0.57
PSMA6-214ENST00000556506 ZNF608Q9ULD9 1512 aaPredicted RBP11.5□□□□□ -0.57
PSMA6-214ENST00000556506 NPM3O75607 178 aaKnown RBP11.49□□□□□ -0.57
PSMA6-214ENST00000556506 FAM9AQ8IZU1 332 aaPredicted RBP11.49□□□□□ -0.57
PSMA6-214ENST00000556506 CSRNP3Q8WYN3 585 aa11.49□□□□□ -0.57
PSMA6-214ENST00000556506 IGF1RP08069 1367 aa11.49□□□□□ -0.57
PSMA6-214ENST00000556506 ABCA5Q8WWZ7 1642 aa11.49□□□□□ -0.57
PSMA6-214ENST00000556506 CNKSR2Q8WXI2 1034 aa11.48□□□□□ -0.57
PSMA6-214ENST00000556506 AQRO60306 1485 aaKnown RBP eCLIP11.47□□□□□ -0.574e-6■■■■□ 25.5
PSMA6-214ENST00000556506 GAPVD1Q14C86 1478 aa11.46□□□□□ -0.57
PSMA6-214ENST00000556506 EIF4G3O43432 1585 aaKnown RBP11.42□□□□□ -0.58
PSMA6-214ENST00000556506 ERICH3Q5RHP9 1530 aa11.42□□□□□ -0.58
PSMA6-214ENST00000556506 PRXQ9BXM0 1461 aa11.42□□□□□ -0.58
PSMA6-214ENST00000556506 GRIN2BQ13224 1484 aa11.41□□□□□ -0.58
PSMA6-214ENST00000556506 CARMIL1Q5VZK9 1371 aa11.4□□□□□ -0.59
PSMA6-214ENST00000556506 PBRM1Q86U86 1689 aa11.4□□□□□ -0.59
PSMA6-214ENST00000556506 LOC105371045A0A1W2PR82 267 aa11.39□□□□□ -0.59
PSMA6-214ENST00000556506 KIF21BO75037 1637 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms