RNA–Protein interactions for RNA: ENST00000556436.1

SRSF5-214, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-214ENST00000556436 NISCHQ9Y2I1 1504 aa31.7■■■□□ 2.66
SRSF5-214ENST00000556436 CCDC180Q9P1Z9 1646 aa28.11■■■□□ 2.09
SRSF5-214ENST00000556436 ABCC9O60706 1549 aa27.28■■□□□ 1.96
SRSF5-214ENST00000556436 ZCCHC6Q5VYS8 1495 aaKnown RBP26.49■■□□□ 1.83
SRSF5-214ENST00000556436 NACADO15069 1562 aa26.33■■□□□ 1.8
SRSF5-214ENST00000556436 RB1CC1Q8TDY2 1594 aa26.31■■□□□ 1.8
SRSF5-214ENST00000556436 DCAF8L2P0C7V8 631 aa26.27■■□□□ 1.8
SRSF5-214ENST00000556436 MYO15BQ96JP2 1530 aa26.23■■□□□ 1.79
SRSF5-214ENST00000556436 DCAF1Q9Y4B6 1507 aa26.22■■□□□ 1.79
SRSF5-214ENST00000556436 UNC13AQ9UPW8 1703 aa25.84■■□□□ 1.73
SRSF5-214ENST00000556436 SCRIBQ14160 1630 aa25.7■■□□□ 1.71
SRSF5-214ENST00000556436 BICRAQ9NZM4 1560 aa25.58■■□□□ 1.69
SRSF5-214ENST00000556436 PABPN1Q86U42 306 aaKnown RBP eCLIP25.49■■□□□ 1.67
SRSF5-214ENST00000556436 SHROOM4Q9ULL8 1493 aa25.24■■□□□ 1.63
SRSF5-214ENST00000556436 EIF4G1Q04637 1599 aaKnown RBP24.85■■□□□ 1.57
SRSF5-214ENST00000556436 DNAJC5BQ9UF47 199 aa24.82■■□□□ 1.56
SRSF5-214ENST00000556436 CECR2Q9BXF3 1484 aa24.7■■□□□ 1.55
SRSF5-214ENST00000556436 CC2D2AQ9P2K1 1620 aa24.7■■□□□ 1.54
SRSF5-214ENST00000556436 SMARCA4P51532 1647 aa24.58■■□□□ 1.53
SRSF5-214ENST00000556436 BAZ1AQ9NRL2 1556 aaPredicted RBP24.54■■□□□ 1.52
SRSF5-214ENST00000556436 MROH2BQ7Z745 1585 aa24.46■■□□□ 1.51
SRSF5-214ENST00000556436 ATAD2BQ9ULI0 1458 aa24.36■■□□□ 1.49
SRSF5-214ENST00000556436 SMARCA2P51531 1590 aa24.32■■□□□ 1.48
SRSF5-214ENST00000556436 PEG3Q9GZU2 1588 aa24.32■■□□□ 1.48
SRSF5-214ENST00000556436 NCAPD3P42695 1498 aa24.26■■□□□ 1.47
SRSF5-214ENST00000556436 RSF1Q96T23 1441 aaPredicted RBP24.23■■□□□ 1.47
SRSF5-214ENST00000556436 WIZO95785 1651 aa24.23■■□□□ 1.47
SRSF5-214ENST00000556436 HMGXB3Q12766 1538 aa24.22■■□□□ 1.47
SRSF5-214ENST00000556436 BAZ1BQ9UIG0 1483 aaKnown RBP24.16■■□□□ 1.46
SRSF5-214ENST00000556436 TOP2AP11388 1531 aaKnown RBP23.96■■□□□ 1.43
SRSF5-214ENST00000556436 SUPT5HO00267 1087 aaKnown RBP23.72■■□□□ 1.39
SRSF5-214ENST00000556436 NESP48681 1621 aa23.7■■□□□ 1.39
SRSF5-214ENST00000556436 CCDC88BA6NC98 1476 aa23.65■■□□□ 1.38
SRSF5-214ENST00000556436 LAMC3Q9Y6N6 1575 aa23.62■■□□□ 1.37
SRSF5-214ENST00000556436 CADPSQ9ULU8 1353 aa23.56■■□□□ 1.36
SRSF5-214ENST00000556436 CFTRP13569 1480 aa23.5■■□□□ 1.35
SRSF5-214ENST00000556436 KIF21AQ7Z4S6 1674 aa23.46■■□□□ 1.35
SRSF5-214ENST00000556436 ERCC6Q03468 1493 aa23.45■■□□□ 1.34
SRSF5-214ENST00000556436 PRDM2Q13029 1718 aa23.43■■□□□ 1.34
SRSF5-214ENST00000556436 PDS5BQ9NTI5 1447 aa23.4■■□□□ 1.34
SRSF5-214ENST00000556436 FANCD2Q9BXW9 1451 aa23.34■■□□□ 1.33
SRSF5-214ENST00000556436 THOC2Q8NI27 1593 aaKnown RBP23.33■■□□□ 1.33
SRSF5-214ENST00000556436 CEP164Q9UPV0 1460 aa23.29■■□□□ 1.32
SRSF5-214ENST00000556436 MRC2Q9UBG0 1479 aa23.21■■□□□ 1.31
SRSF5-214ENST00000556436 WDR62O43379 1518 aa23.16■■□□□ 1.3
SRSF5-214ENST00000556436 URB2Q14146 1524 aaKnown RBP23.13■■□□□ 1.29
SRSF5-214ENST00000556436 CUX2O14529 1486 aa23.12■■□□□ 1.29
SRSF5-214ENST00000556436 TOPBP1Q92547 1522 aa23.01■■□□□ 1.27
SRSF5-214ENST00000556436 DNMBPQ6XZF7 1577 aa23.01■■□□□ 1.27
SRSF5-214ENST00000556436 CUX1P39880 1505 aa22.95■■□□□ 1.26
SRSF5-214ENST00000556436 ABCC8Q09428 1581 aa22.92■■□□□ 1.26
SRSF5-214ENST00000556436 SYNJ1O43426 1573 aa22.84■■□□□ 1.25
SRSF5-214ENST00000556436 POLA1P09884 1462 aaPredicted RBP22.83■■□□□ 1.25
SRSF5-214ENST00000556436 WRNQ14191 1432 aaPredicted RBP eCLIP22.82■■□□□ 1.24
SRSF5-214ENST00000556436 FGD5Q6ZNL6 1462 aa22.81■■□□□ 1.24
SRSF5-214ENST00000556436 BIVM-ERCC5R4GMW8 1640 aa22.81■■□□□ 1.24
SRSF5-214ENST00000556436 TOP2BQ02880 1626 aa22.79■■□□□ 1.24
SRSF5-214ENST00000556436 IFT140Q96RY7 1462 aa22.78■■□□□ 1.24
SRSF5-214ENST00000556436 TARBP1Q13395 1621 aaKnown RBP22.77■■□□□ 1.24
SRSF5-214ENST00000556436 RAD54L2Q9Y4B4 1467 aa22.73■■□□□ 1.23
SRSF5-214ENST00000556436 ZNF608Q9ULD9 1512 aaPredicted RBP22.72■■□□□ 1.23
SRSF5-214ENST00000556436 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
SRSF5-214ENST00000556436 SOGA1O94964 1423 aa22.67■■□□□ 1.22
SRSF5-214ENST00000556436 EIF4G3O43432 1585 aaKnown RBP22.65■■□□□ 1.22
SRSF5-214ENST00000556436 ABCA10Q8WWZ4 1543 aa22.58■■□□□ 1.21
SRSF5-214ENST00000556436 AQRO60306 1485 aaKnown RBP eCLIP22.56■■□□□ 1.21e-14■■■■■ 36.3
SRSF5-214ENST00000556436 TDRD9Q8NDG6 1382 aaKnown RBP22.55■■□□□ 1.2
SRSF5-214ENST00000556436 ABCA5Q8WWZ7 1642 aa22.53■■□□□ 1.2
SRSF5-214ENST00000556436 PBRM1Q86U86 1689 aa22.47■■□□□ 1.19
SRSF5-214ENST00000556436 GAPVD1Q14C86 1478 aa22.45■■□□□ 1.18
SRSF5-214ENST00000556436 GRIN2BQ13224 1484 aa22.41■■□□□ 1.18
SRSF5-214ENST00000556436 SNAPC4Q5SXM2 1469 aa22.4■■□□□ 1.18
SRSF5-214ENST00000556436 CHD1O14646 1710 aa22.34■■□□□ 1.17
SRSF5-214ENST00000556436 TRIM41Q8WV44 630 aa22.34■■□□□ 1.17
SRSF5-214ENST00000556436 MAGI1Q96QZ7 1491 aaPredicted RBP22.33■■□□□ 1.16
SRSF5-214ENST00000556436 ERICH3Q5RHP9 1530 aa22.31■■□□□ 1.16
SRSF5-214ENST00000556436 ADAMTS12P58397 1594 aa22.3■■□□□ 1.16
SRSF5-214ENST00000556436 KIF27Q86VH2 1401 aa22.29■■□□□ 1.16
SRSF5-214ENST00000556436 CHIC1Q5VXU3 224 aa22.28■■□□□ 1.16
SRSF5-214ENST00000556436 RUSC2Q8N2Y8 1516 aa22.25■■□□□ 1.15
SRSF5-214ENST00000556436 SYNJ2O15056 1496 aa22.24■■□□□ 1.15
SRSF5-214ENST00000556436 IGF1RP08069 1367 aa22.19■■□□□ 1.14
SRSF5-214ENST00000556436 FHAD1B1AJZ9 1412 aa22.19■■□□□ 1.14
SRSF5-214ENST00000556436 FBLN2P98095 1184 aa22.17■■□□□ 1.14
SRSF5-214ENST00000556436 CUL7Q14999 1698 aa22.17■■□□□ 1.14
SRSF5-214ENST00000556436 GRIN2AQ12879 1464 aa22.15■■□□□ 1.14
SRSF5-214ENST00000556436 CHMP7Q8WUX9 453 aaPredicted RBP22.13■■□□□ 1.13
SRSF5-214ENST00000556436 OSCARQ8IYS5 282 aa22.12■■□□□ 1.13
SRSF5-214ENST00000556436 DNAJC5Q9H3Z4 198 aa22.1■■□□□ 1.13
SRSF5-214ENST00000556436 CLASP1Q7Z460 1538 aa22.08■■□□□ 1.13
SRSF5-214ENST00000556436 CEP170Q5SW79 1584 aa22.08■■□□□ 1.12
SRSF5-214ENST00000556436 CARMIL1Q5VZK9 1371 aa22.05■■□□□ 1.12
SRSF5-214ENST00000556436 NUP160Q12769 1436 aa22.04■■□□□ 1.12
SRSF5-214ENST00000556436 EEA1Q15075 1411 aa21.99■■□□□ 1.11
SRSF5-214ENST00000556436 PRXQ9BXM0 1461 aa21.97■■□□□ 1.11
SRSF5-214ENST00000556436 RAPGEF2Q9Y4G8 1499 aa21.96■■□□□ 1.11
SRSF5-214ENST00000556436 FAM9AQ8IZU1 332 aaPredicted RBP21.93■■□□□ 1.1
SRSF5-214ENST00000556436 CSRNP3Q8WYN3 585 aa21.91■■□□□ 1.1
SRSF5-214ENST00000556436 RIMBP3CA6NJZ7 1639 aa21.9■■□□□ 1.1
SRSF5-214ENST00000556436 RIMBP3BA6NNM3 1639 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms