RNA–Protein interactions for RNA: ENST00000556334.5

PPP1R13B-213, Transcript of protein phosphatase 1 regulatory subunit 13B, humanhuman

TSL 1 (best)

Gene PPP1R13B, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R13B-213ENST00000556334 NISCHQ9Y2I1 1504 aa28.38■■■□□ 2.13
PPP1R13B-213ENST00000556334 ABCC9O60706 1549 aa25.75■■□□□ 1.71
PPP1R13B-213ENST00000556334 CCDC180Q9P1Z9 1646 aa25.45■■□□□ 1.66
PPP1R13B-213ENST00000556334 DNAJC5BQ9UF47 199 aa24.32■■□□□ 1.48
PPP1R13B-213ENST00000556334 RB1CC1Q8TDY2 1594 aa24.32■■□□□ 1.48
PPP1R13B-213ENST00000556334 DCAF8L2P0C7V8 631 aa24.21■■□□□ 1.47
PPP1R13B-213ENST00000556334 NACADO15069 1562 aa24.09■■□□□ 1.45
PPP1R13B-213ENST00000556334 PABPN1Q86U42 306 aaKnown RBP eCLIP24.02■■□□□ 1.44
PPP1R13B-213ENST00000556334 UNC13AQ9UPW8 1703 aa23.86■■□□□ 1.41
PPP1R13B-213ENST00000556334 BICRAQ9NZM4 1560 aa23.69■■□□□ 1.38
PPP1R13B-213ENST00000556334 MYO15BQ96JP2 1530 aa23.64■■□□□ 1.37
PPP1R13B-213ENST00000556334 ZCCHC6Q5VYS8 1495 aaKnown RBP23.49■■□□□ 1.35
PPP1R13B-213ENST00000556334 SCRIBQ14160 1630 aa23.34■■□□□ 1.33
PPP1R13B-213ENST00000556334 DCAF1Q9Y4B6 1507 aa23.32■■□□□ 1.32
PPP1R13B-213ENST00000556334 CC2D2AQ9P2K1 1620 aa23.2■■□□□ 1.3
PPP1R13B-213ENST00000556334 CECR2Q9BXF3 1484 aa23.15■■□□□ 1.3
PPP1R13B-213ENST00000556334 SHROOM4Q9ULL8 1493 aa23.14■■□□□ 1.29
PPP1R13B-213ENST00000556334 EIF4G1Q04637 1599 aaKnown RBP23.09■■□□□ 1.29
PPP1R13B-213ENST00000556334 DNAJC5Q9H3Z4 198 aa22.31■■□□□ 1.16
PPP1R13B-213ENST00000556334 NCAPD3P42695 1498 aa22.27■■□□□ 1.16
PPP1R13B-213ENST00000556334 ATAD2BQ9ULI0 1458 aa22.23■■□□□ 1.15
PPP1R13B-213ENST00000556334 ERCC6Q03468 1493 aa22.19■■□□□ 1.14
PPP1R13B-213ENST00000556334 SMARCA4P51532 1647 aa22.18■■□□□ 1.14
PPP1R13B-213ENST00000556334 NESP48681 1621 aa22.11■■□□□ 1.13
PPP1R13B-213ENST00000556334 SMARCA2P51531 1590 aa22.1■■□□□ 1.13
PPP1R13B-213ENST00000556334 CUX2O14529 1486 aa22.09■■□□□ 1.13
PPP1R13B-213ENST00000556334 HMGXB3Q12766 1538 aa22.07■■□□□ 1.12
PPP1R13B-213ENST00000556334 BAZ1BQ9UIG0 1483 aaKnown RBP22.02■■□□□ 1.12
PPP1R13B-213ENST00000556334 BAZ1AQ9NRL2 1556 aaPredicted RBP22.01■■□□□ 1.11
PPP1R13B-213ENST00000556334 MROH2BQ7Z745 1585 aa21.94■■□□□ 1.1
PPP1R13B-213ENST00000556334 PEG3Q9GZU2 1588 aa21.88■■□□□ 1.09
PPP1R13B-213ENST00000556334 THOC2Q8NI27 1593 aaKnown RBP21.81■■□□□ 1.08
PPP1R13B-213ENST00000556334 LAMC3Q9Y6N6 1575 aa21.78■■□□□ 1.08
PPP1R13B-213ENST00000556334 KIF21AQ7Z4S6 1674 aa21.77■■□□□ 1.08
PPP1R13B-213ENST00000556334 WIZO95785 1651 aa21.69■■□□□ 1.06
PPP1R13B-213ENST00000556334 PDS5BQ9NTI5 1447 aa21.66■■□□□ 1.06
PPP1R13B-213ENST00000556334 CADPSQ9ULU8 1353 aa21.61■■□□□ 1.05
PPP1R13B-213ENST00000556334 MRC2Q9UBG0 1479 aa21.52■■□□□ 1.04
PPP1R13B-213ENST00000556334 WDR62O43379 1518 aa21.45■■□□□ 1.02
PPP1R13B-213ENST00000556334 CEP164Q9UPV0 1460 aa21.41■■□□□ 1.02
PPP1R13B-213ENST00000556334 RSF1Q96T23 1441 aaPredicted RBP21.41■■□□□ 1.02
PPP1R13B-213ENST00000556334 TRIM41Q8WV44 630 aa21.41■■□□□ 1.02
PPP1R13B-213ENST00000556334 FANCD2Q9BXW9 1451 aa21.4■■□□□ 1.02
PPP1R13B-213ENST00000556334 CFTRP13569 1480 aa21.32■■□□□ 1
PPP1R13B-213ENST00000556334 TOP2AP11388 1531 aaKnown RBP21.32■■□□□ 1
PPP1R13B-213ENST00000556334 URB2Q14146 1524 aaKnown RBP21.26■□□□□ 0.99
PPP1R13B-213ENST00000556334 OSCARQ8IYS5 282 aa21.15■□□□□ 0.98
PPP1R13B-213ENST00000556334 CCDC88BA6NC98 1476 aa21.13■□□□□ 0.97
PPP1R13B-213ENST00000556334 PRDM2Q13029 1718 aa21.09■□□□□ 0.97
PPP1R13B-213ENST00000556334 ZNF608Q9ULD9 1512 aaPredicted RBP21.05■□□□□ 0.96
PPP1R13B-213ENST00000556334 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
PPP1R13B-213ENST00000556334 IFT140Q96RY7 1462 aa20.96■□□□□ 0.95
PPP1R13B-213ENST00000556334 RIMBP3CA6NJZ7 1639 aa20.91■□□□□ 0.94
PPP1R13B-213ENST00000556334 RIMBP3BA6NNM3 1639 aa20.91■□□□□ 0.94
PPP1R13B-213ENST00000556334 RIMBP3Q9UFD9 1639 aa20.91■□□□□ 0.94
PPP1R13B-213ENST00000556334 EIF4G3O43432 1585 aaKnown RBP20.88■□□□□ 0.93
PPP1R13B-213ENST00000556334 DNMBPQ6XZF7 1577 aa20.86■□□□□ 0.93
PPP1R13B-213ENST00000556334 AQRO60306 1485 aaKnown RBP eCLIP20.85■□□□□ 0.93
PPP1R13B-213ENST00000556334 ABCC8Q09428 1581 aa20.81■□□□□ 0.92
PPP1R13B-213ENST00000556334 ARHGEF11O15085 1522 aa20.81■□□□□ 0.92
PPP1R13B-213ENST00000556334 TARBP1Q13395 1621 aaKnown RBP20.79■□□□□ 0.92
PPP1R13B-213ENST00000556334 FBLN2P98095 1184 aa20.78■□□□□ 0.92
PPP1R13B-213ENST00000556334 CHD1O14646 1710 aa20.78■□□□□ 0.92
PPP1R13B-213ENST00000556334 POLA1P09884 1462 aaPredicted RBP20.76■□□□□ 0.91
PPP1R13B-213ENST00000556334 RAD54L2Q9Y4B4 1467 aa20.76■□□□□ 0.91
PPP1R13B-213ENST00000556334 SUPT5HO00267 1087 aaKnown RBP20.76■□□□□ 0.91
PPP1R13B-213ENST00000556334 CYB5RLQ6IPT4 315 aa20.74■□□□□ 0.91
PPP1R13B-213ENST00000556334 TDRD9Q8NDG6 1382 aaKnown RBP20.72■□□□□ 0.91
PPP1R13B-213ENST00000556334 SOGA1O94964 1423 aa20.68■□□□□ 0.9
PPP1R13B-213ENST00000556334 FGD5Q6ZNL6 1462 aa20.64■□□□□ 0.89
PPP1R13B-213ENST00000556334 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
PPP1R13B-213ENST00000556334 CUX1P39880 1505 aa20.6■□□□□ 0.89
PPP1R13B-213ENST00000556334 SNAPC4Q5SXM2 1469 aa20.6■□□□□ 0.89
PPP1R13B-213ENST00000556334 TRHP20396 242 aaPredicted RBP20.57■□□□□ 0.88
PPP1R13B-213ENST00000556334 CHMP7Q8WUX9 453 aaPredicted RBP20.53■□□□□ 0.88
PPP1R13B-213ENST00000556334 CLASP1Q7Z460 1538 aa20.48■□□□□ 0.87
PPP1R13B-213ENST00000556334 GRIN2BQ13224 1484 aa20.47■□□□□ 0.87
PPP1R13B-213ENST00000556334 MAGI1Q96QZ7 1491 aaPredicted RBP20.45■□□□□ 0.86
PPP1R13B-213ENST00000556334 WDR97A6NE52 1622 aa20.45■□□□□ 0.86
PPP1R13B-213ENST00000556334 SYNJ1O43426 1573 aa20.43■□□□□ 0.86
PPP1R13B-213ENST00000556334 PBRM1Q86U86 1689 aa20.42■□□□□ 0.86
PPP1R13B-213ENST00000556334 SYNJ2O15056 1496 aa20.41■□□□□ 0.86
PPP1R13B-213ENST00000556334 GAPVD1Q14C86 1478 aa20.41■□□□□ 0.86
PPP1R13B-213ENST00000556334 ABCA10Q8WWZ4 1543 aa20.33■□□□□ 0.85
PPP1R13B-213ENST00000556334 ABCA5Q8WWZ7 1642 aa20.33■□□□□ 0.84
PPP1R13B-213ENST00000556334 ERCC6L2Q5T890 1561 aa20.26■□□□□ 0.83
PPP1R13B-213ENST00000556334 WRNQ14191 1432 aaPredicted RBP eCLIP20.23■□□□□ 0.83
PPP1R13B-213ENST00000556334 GRIN2AQ12879 1464 aa20.23■□□□□ 0.83
PPP1R13B-213ENST00000556334 ADAMTS12P58397 1594 aa20.2■□□□□ 0.82
PPP1R13B-213ENST00000556334 CEP170Q5SW79 1584 aa20.2■□□□□ 0.82
PPP1R13B-213ENST00000556334 TOP2BQ02880 1626 aa20.19■□□□□ 0.82
PPP1R13B-213ENST00000556334 BIVM-ERCC5R4GMW8 1640 aa20.18■□□□□ 0.82
PPP1R13B-213ENST00000556334 NUP160Q12769 1436 aa20.13■□□□□ 0.81
PPP1R13B-213ENST00000556334 FHAD1B1AJZ9 1412 aa20.11■□□□□ 0.81
PPP1R13B-213ENST00000556334 SHROOM2Q13796 1616 aa20.05■□□□□ 0.8
PPP1R13B-213ENST00000556334 ERICH3Q5RHP9 1530 aa20.05■□□□□ 0.8
PPP1R13B-213ENST00000556334 PRG4Q92954 1404 aaPredicted RBP20.02■□□□□ 0.79
PPP1R13B-213ENST00000556334 AEBP2Q6ZN18 517 aaPredicted RBP20.01■□□□□ 0.79
PPP1R13B-213ENST00000556334 JPH4Q96JJ6 628 aa19.99■□□□□ 0.79
PPP1R13B-213ENST00000556334 RUSC2Q8N2Y8 1516 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms