RNA–Protein interactions for RNA: ENST00000556323.1

AL049872.1-201, humanhuman

BASIC

Gene AL049872.1, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049872.1-201ENST00000556323 NISCHQ9Y2I1 1504 aa13.71□□□□□ -0.21
AL049872.1-201ENST00000556323 ABCC9O60706 1549 aa12.19□□□□□ -0.46
AL049872.1-201ENST00000556323 CCDC180Q9P1Z9 1646 aa12.15□□□□□ -0.46
AL049872.1-201ENST00000556323 DCAF8L2P0C7V8 631 aa11.72□□□□□ -0.53
AL049872.1-201ENST00000556323 RB1CC1Q8TDY2 1594 aa11.62□□□□□ -0.55
AL049872.1-201ENST00000556323 NACADO15069 1562 aa11.56□□□□□ -0.56
AL049872.1-201ENST00000556323 MYO15BQ96JP2 1530 aa11.44□□□□□ -0.58
AL049872.1-201ENST00000556323 PABPN1Q86U42 306 aaKnown RBP eCLIP11.42□□□□□ -0.58
AL049872.1-201ENST00000556323 ZCCHC6Q5VYS8 1495 aaKnown RBP11.38□□□□□ -0.59
AL049872.1-201ENST00000556323 DCAF1Q9Y4B6 1507 aa11.33□□□□□ -0.6
AL049872.1-201ENST00000556323 DNAJC5BQ9UF47 199 aa11.31□□□□□ -0.6
AL049872.1-201ENST00000556323 BICRAQ9NZM4 1560 aa11.17□□□□□ -0.62
AL049872.1-201ENST00000556323 SHROOM4Q9ULL8 1493 aa11.15□□□□□ -0.62
AL049872.1-201ENST00000556323 SCRIBQ14160 1630 aa11.15□□□□□ -0.62
AL049872.1-201ENST00000556323 UNC13AQ9UPW8 1703 aa11.09□□□□□ -0.63
AL049872.1-201ENST00000556323 CECR2Q9BXF3 1484 aa10.98□□□□□ -0.65
AL049872.1-201ENST00000556323 EIF4G1Q04637 1599 aaKnown RBP10.96□□□□□ -0.65
AL049872.1-201ENST00000556323 CC2D2AQ9P2K1 1620 aa10.93□□□□□ -0.66
AL049872.1-201ENST00000556323 NCAPD3P42695 1498 aa10.71□□□□□ -0.69
AL049872.1-201ENST00000556323 ATAD2BQ9ULI0 1458 aa10.68□□□□□ -0.7
AL049872.1-201ENST00000556323 BAZ1AQ9NRL2 1556 aaPredicted RBP10.66□□□□□ -0.7
AL049872.1-201ENST00000556323 SMARCA2P51531 1590 aa10.65□□□□□ -0.71
AL049872.1-201ENST00000556323 SMARCA4P51532 1647 aa10.62□□□□□ -0.71
AL049872.1-201ENST00000556323 BAZ1BQ9UIG0 1483 aaKnown RBP10.61□□□□□ -0.71
AL049872.1-201ENST00000556323 HMGXB3Q12766 1538 aa10.58□□□□□ -0.72
AL049872.1-201ENST00000556323 ERCC6Q03468 1493 aa10.57□□□□□ -0.72
AL049872.1-201ENST00000556323 MROH2BQ7Z745 1585 aa10.56□□□□□ -0.72
AL049872.1-201ENST00000556323 PEG3Q9GZU2 1588 aa10.52□□□□□ -0.73
AL049872.1-201ENST00000556323 CUX2O14529 1486 aa10.46□□□□□ -0.74
AL049872.1-201ENST00000556323 NESP48681 1621 aa10.45□□□□□ -0.74
AL049872.1-201ENST00000556323 PDS5BQ9NTI5 1447 aa10.44□□□□□ -0.74
AL049872.1-201ENST00000556323 CADPSQ9ULU8 1353 aa10.43□□□□□ -0.74
AL049872.1-201ENST00000556323 RSF1Q96T23 1441 aaPredicted RBP10.42□□□□□ -0.74
AL049872.1-201ENST00000556323 LAMC3Q9Y6N6 1575 aa10.4□□□□□ -0.74
AL049872.1-201ENST00000556323 WIZO95785 1651 aa10.38□□□□□ -0.75
AL049872.1-201ENST00000556323 DNAJC5Q9H3Z4 198 aa10.36□□□□□ -0.75
AL049872.1-201ENST00000556323 TOP2AP11388 1531 aaKnown RBP10.32□□□□□ -0.76
AL049872.1-201ENST00000556323 CFTRP13569 1480 aa10.29□□□□□ -0.76
AL049872.1-201ENST00000556323 MRC2Q9UBG0 1479 aa10.29□□□□□ -0.76
AL049872.1-201ENST00000556323 FANCD2Q9BXW9 1451 aa10.28□□□□□ -0.76
AL049872.1-201ENST00000556323 CEP164Q9UPV0 1460 aa10.28□□□□□ -0.76
AL049872.1-201ENST00000556323 THOC2Q8NI27 1593 aaKnown RBP10.26□□□□□ -0.77
AL049872.1-201ENST00000556323 CCDC88BA6NC98 1476 aa10.23□□□□□ -0.77
AL049872.1-201ENST00000556323 WDR62O43379 1518 aa10.21□□□□□ -0.78
AL049872.1-201ENST00000556323 KIF21AQ7Z4S6 1674 aa10.2□□□□□ -0.78
AL049872.1-201ENST00000556323 SUPT5HO00267 1087 aaKnown RBP10.16□□□□□ -0.78
AL049872.1-201ENST00000556323 URB2Q14146 1524 aaKnown RBP10.13□□□□□ -0.79
AL049872.1-201ENST00000556323 ABCC8Q09428 1581 aa10.1□□□□□ -0.79
AL049872.1-201ENST00000556323 OSCARQ8IYS5 282 aa10.09□□□□□ -0.79
AL049872.1-201ENST00000556323 IFT140Q96RY7 1462 aa10.08□□□□□ -0.8
AL049872.1-201ENST00000556323 TOPBP1Q92547 1522 aa10.07□□□□□ -0.8
AL049872.1-201ENST00000556323 DNMBPQ6XZF7 1577 aa10.01□□□□□ -0.81
AL049872.1-201ENST00000556323 TRIM41Q8WV44 630 aa10.01□□□□□ -0.81
AL049872.1-201ENST00000556323 ZNF608Q9ULD9 1512 aaPredicted RBP10□□□□□ -0.81
AL049872.1-201ENST00000556323 SOGA1O94964 1423 aa9.99□□□□□ -0.81
AL049872.1-201ENST00000556323 FBLN2P98095 1184 aa9.99□□□□□ -0.81
AL049872.1-201ENST00000556323 AQRO60306 1485 aaKnown RBP eCLIP9.97□□□□□ -0.81
AL049872.1-201ENST00000556323 POLA1P09884 1462 aaPredicted RBP9.97□□□□□ -0.81
AL049872.1-201ENST00000556323 TDRD9Q8NDG6 1382 aaKnown RBP9.96□□□□□ -0.82
AL049872.1-201ENST00000556323 PRDM2Q13029 1718 aa9.96□□□□□ -0.82
AL049872.1-201ENST00000556323 RAD54L2Q9Y4B4 1467 aa9.95□□□□□ -0.82
AL049872.1-201ENST00000556323 FGD5Q6ZNL6 1462 aa9.93□□□□□ -0.82
AL049872.1-201ENST00000556323 CHMP7Q8WUX9 453 aaPredicted RBP9.92□□□□□ -0.82
AL049872.1-201ENST00000556323 EIF4G3O43432 1585 aaKnown RBP9.9□□□□□ -0.82
AL049872.1-201ENST00000556323 CUX1P39880 1505 aa9.9□□□□□ -0.82
AL049872.1-201ENST00000556323 TARBP1Q13395 1621 aaKnown RBP9.89□□□□□ -0.83
AL049872.1-201ENST00000556323 WRNQ14191 1432 aaPredicted RBP eCLIP9.88□□□□□ -0.83
AL049872.1-201ENST00000556323 GRIN2BQ13224 1484 aa9.87□□□□□ -0.83
AL049872.1-201ENST00000556323 SNAPC4Q5SXM2 1469 aa9.86□□□□□ -0.83
AL049872.1-201ENST00000556323 GAPVD1Q14C86 1478 aa9.85□□□□□ -0.83
AL049872.1-201ENST00000556323 CYB5RLQ6IPT4 315 aa9.84□□□□□ -0.83
AL049872.1-201ENST00000556323 WDR97A6NE52 1622 aa9.84□□□□□ -0.83
AL049872.1-201ENST00000556323 MAGI1Q96QZ7 1491 aaPredicted RBP9.84□□□□□ -0.83
AL049872.1-201ENST00000556323 ABCA10Q8WWZ4 1543 aa9.83□□□□□ -0.84
AL049872.1-201ENST00000556323 ARHGEF11O15085 1522 aa9.82□□□□□ -0.84
AL049872.1-201ENST00000556323 SYNJ2O15056 1496 aa9.81□□□□□ -0.84
AL049872.1-201ENST00000556323 SYNJ1O43426 1573 aa9.77□□□□□ -0.85
AL049872.1-201ENST00000556323 RIMBP3CA6NJZ7 1639 aa9.76□□□□□ -0.85
AL049872.1-201ENST00000556323 RIMBP3BA6NNM3 1639 aa9.76□□□□□ -0.85
AL049872.1-201ENST00000556323 TOP2BQ02880 1626 aa9.76□□□□□ -0.85
AL049872.1-201ENST00000556323 RIMBP3Q9UFD9 1639 aa9.76□□□□□ -0.85
AL049872.1-201ENST00000556323 TRHP20396 242 aaPredicted RBP9.75□□□□□ -0.85
AL049872.1-201ENST00000556323 FHAD1B1AJZ9 1412 aa9.74□□□□□ -0.85
AL049872.1-201ENST00000556323 GRIN2AQ12879 1464 aa9.72□□□□□ -0.85
AL049872.1-201ENST00000556323 CHD1O14646 1710 aa9.72□□□□□ -0.85
AL049872.1-201ENST00000556323 ARAP1Q96P48 1450 aa9.72□□□□□ -0.85
AL049872.1-201ENST00000556323 ABCA5Q8WWZ7 1642 aa9.71□□□□□ -0.85
AL049872.1-201ENST00000556323 BIVM-ERCC5R4GMW8 1640 aa9.71□□□□□ -0.85
AL049872.1-201ENST00000556323 CLASP1Q7Z460 1538 aa9.71□□□□□ -0.86
AL049872.1-201ENST00000556323 KIF27Q86VH2 1401 aa9.7□□□□□ -0.86
AL049872.1-201ENST00000556323 ERICH3Q5RHP9 1530 aa9.7□□□□□ -0.86
AL049872.1-201ENST00000556323 NUP160Q12769 1436 aa9.68□□□□□ -0.86
AL049872.1-201ENST00000556323 JPH4Q96JJ6 628 aa9.67□□□□□ -0.86
AL049872.1-201ENST00000556323 PBRM1Q86U86 1689 aa9.67□□□□□ -0.86
AL049872.1-201ENST00000556323 ADAMTS12P58397 1594 aa9.67□□□□□ -0.86
AL049872.1-201ENST00000556323 IGF1RP08069 1367 aa9.65□□□□□ -0.86
AL049872.1-201ENST00000556323 CARMIL1Q5VZK9 1371 aa9.63□□□□□ -0.87
AL049872.1-201ENST00000556323 PRG4Q92954 1404 aaPredicted RBP9.62□□□□□ -0.87
AL049872.1-201ENST00000556323 NPM1P06748 294 aaKnown RBP eCLIP9.61□□□□□ -0.87
AL049872.1-201ENST00000556323 CEP170Q5SW79 1584 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms