RNA–Protein interactions for RNA: ENST00000556243.5

ACTR10-210, Transcript of actin related protein 10 homolog, humanhuman

TSL 2

Gene ACTR10, Length 484 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR10-210ENST00000556243 NISCHQ9Y2I1 1504 aa42.69■■■■■ 4.42
ACTR10-210ENST00000556243 ABCC9O60706 1549 aa38.38■■■■□ 3.73
ACTR10-210ENST00000556243 CCDC180Q9P1Z9 1646 aa38.33■■■■□ 3.73
ACTR10-210ENST00000556243 RB1CC1Q8TDY2 1594 aa36.53■■■■□ 3.44
ACTR10-210ENST00000556243 NACADO15069 1562 aa36.29■■■■□ 3.4
ACTR10-210ENST00000556243 DNAJC5BQ9UF47 199 aa36.09■■■■□ 3.37
ACTR10-210ENST00000556243 DCAF8L2P0C7V8 631 aa36.05■■■■□ 3.36
ACTR10-210ENST00000556243 MYO15BQ96JP2 1530 aa35.8■■■■□ 3.32
ACTR10-210ENST00000556243 PABPN1Q86U42 306 aaKnown RBP eCLIP35.73■■■■□ 3.31
ACTR10-210ENST00000556243 UNC13AQ9UPW8 1703 aa35.65■■■■□ 3.3
ACTR10-210ENST00000556243 BICRAQ9NZM4 1560 aa35.45■■■■□ 3.27
ACTR10-210ENST00000556243 ZCCHC6Q5VYS8 1495 aaKnown RBP35.35■■■■□ 3.25
ACTR10-210ENST00000556243 DCAF1Q9Y4B6 1507 aa35.3■■■■□ 3.24
ACTR10-210ENST00000556243 SHROOM4Q9ULL8 1493 aa35.04■■■■□ 3.2
ACTR10-210ENST00000556243 SCRIBQ14160 1630 aa34.87■■■■□ 3.17
ACTR10-210ENST00000556243 CC2D2AQ9P2K1 1620 aa34.67■■■■□ 3.14
ACTR10-210ENST00000556243 CECR2Q9BXF3 1484 aa34.61■■■■□ 3.13
ACTR10-210ENST00000556243 EIF4G1Q04637 1599 aaKnown RBP34.59■■■■□ 3.13
ACTR10-210ENST00000556243 NCAPD3P42695 1498 aa33.51■■■□□ 2.96
ACTR10-210ENST00000556243 ATAD2BQ9ULI0 1458 aa33.37■■■□□ 2.93
ACTR10-210ENST00000556243 SMARCA4P51532 1647 aa33.3■■■□□ 2.92
ACTR10-210ENST00000556243 SMARCA2P51531 1590 aa33.29■■■□□ 2.92
ACTR10-210ENST00000556243 DNAJC5Q9H3Z4 198 aa33.25■■■□□ 2.91
ACTR10-210ENST00000556243 HMGXB3Q12766 1538 aa33.23■■■□□ 2.91
ACTR10-210ENST00000556243 CUX2O14529 1486 aa33.17■■■□□ 2.9
ACTR10-210ENST00000556243 ERCC6Q03468 1493 aa33.16■■■□□ 2.9
ACTR10-210ENST00000556243 BAZ1AQ9NRL2 1556 aaPredicted RBP33.15■■■□□ 2.9
ACTR10-210ENST00000556243 BAZ1BQ9UIG0 1483 aaKnown RBP33.04■■■□□ 2.88
ACTR10-210ENST00000556243 PEG3Q9GZU2 1588 aa33.02■■■□□ 2.88
ACTR10-210ENST00000556243 NESP48681 1621 aa32.94■■■□□ 2.86
ACTR10-210ENST00000556243 MROH2BQ7Z745 1585 aa32.86■■■□□ 2.85
ACTR10-210ENST00000556243 LAMC3Q9Y6N6 1575 aa32.75■■■□□ 2.83
ACTR10-210ENST00000556243 THOC2Q8NI27 1593 aaKnown RBP32.62■■■□□ 2.81
ACTR10-210ENST00000556243 PDS5BQ9NTI5 1447 aa32.59■■■□□ 2.81
ACTR10-210ENST00000556243 KIF21AQ7Z4S6 1674 aa32.5■■■□□ 2.79
ACTR10-210ENST00000556243 CADPSQ9ULU8 1353 aa32.49■■■□□ 2.79
ACTR10-210ENST00000556243 WIZO95785 1651 aa32.45■■■□□ 2.79
ACTR10-210ENST00000556243 MRC2Q9UBG0 1479 aa32.27■■■□□ 2.76
ACTR10-210ENST00000556243 WDR62O43379 1518 aa32.2■■■□□ 2.74
ACTR10-210ENST00000556243 RSF1Q96T23 1441 aaPredicted RBP32.18■■■□□ 2.74
ACTR10-210ENST00000556243 CEP164Q9UPV0 1460 aa32.13■■■□□ 2.73
ACTR10-210ENST00000556243 CFTRP13569 1480 aa32.1■■■□□ 2.73
ACTR10-210ENST00000556243 FANCD2Q9BXW9 1451 aa32.09■■■□□ 2.73
ACTR10-210ENST00000556243 TOP2AP11388 1531 aaKnown RBP32.06■■■□□ 2.72
ACTR10-210ENST00000556243 URB2Q14146 1524 aaKnown RBP31.81■■■□□ 2.68
ACTR10-210ENST00000556243 PRDM2Q13029 1718 aa31.72■■■□□ 2.67
ACTR10-210ENST00000556243 CCDC88BA6NC98 1476 aa31.72■■■□□ 2.67
ACTR10-210ENST00000556243 TRIM41Q8WV44 630 aa31.69■■■□□ 2.66
ACTR10-210ENST00000556243 OSCARQ8IYS5 282 aa31.67■■■□□ 2.66
ACTR10-210ENST00000556243 IFT140Q96RY7 1462 aa31.51■■■□□ 2.63
ACTR10-210ENST00000556243 TOPBP1Q92547 1522 aa31.47■■■□□ 2.63
ACTR10-210ENST00000556243 ABCC8Q09428 1581 aa31.45■■■□□ 2.63
ACTR10-210ENST00000556243 ZNF608Q9ULD9 1512 aaPredicted RBP31.42■■■□□ 2.62
ACTR10-210ENST00000556243 DNMBPQ6XZF7 1577 aa31.34■■■□□ 2.61
ACTR10-210ENST00000556243 EIF4G3O43432 1585 aaKnown RBP31.23■■■□□ 2.59
ACTR10-210ENST00000556243 RIMBP3CA6NJZ7 1639 aa31.18■■■□□ 2.58
ACTR10-210ENST00000556243 RIMBP3BA6NNM3 1639 aa31.18■■■□□ 2.58
ACTR10-210ENST00000556243 TARBP1Q13395 1621 aaKnown RBP31.18■■■□□ 2.58
ACTR10-210ENST00000556243 RIMBP3Q9UFD9 1639 aa31.18■■■□□ 2.58
ACTR10-210ENST00000556243 AQRO60306 1485 aaKnown RBP eCLIP31.14■■■□□ 2.58
ACTR10-210ENST00000556243 POLA1P09884 1462 aaPredicted RBP31.14■■■□□ 2.58
ACTR10-210ENST00000556243 ARHGEF11O15085 1522 aa31.09■■■□□ 2.57
ACTR10-210ENST00000556243 SOGA1O94964 1423 aa31.02■■■□□ 2.56
ACTR10-210ENST00000556243 RAD54L2Q9Y4B4 1467 aa31.01■■■□□ 2.56
ACTR10-210ENST00000556243 CHD1O14646 1710 aa31■■■□□ 2.55
ACTR10-210ENST00000556243 FBLN2P98095 1184 aa30.96■■■□□ 2.55
ACTR10-210ENST00000556243 TDRD9Q8NDG6 1382 aaKnown RBP30.95■■■□□ 2.55
ACTR10-210ENST00000556243 FGD5Q6ZNL6 1462 aa30.93■■■□□ 2.54
ACTR10-210ENST00000556243 WDR97A6NE52 1622 aa30.91■■■□□ 2.54
ACTR10-210ENST00000556243 CYB5RLQ6IPT4 315 aa30.89■■■□□ 2.54
ACTR10-210ENST00000556243 CUX1P39880 1505 aa30.88■■■□□ 2.53
ACTR10-210ENST00000556243 SNAPC4Q5SXM2 1469 aa30.82■■■□□ 2.52
ACTR10-210ENST00000556243 ARAP1Q96P48 1450 aa30.78■■■□□ 2.52
ACTR10-210ENST00000556243 MAGI1Q96QZ7 1491 aaPredicted RBP30.77■■■□□ 2.52
ACTR10-210ENST00000556243 CHMP7Q8WUX9 453 aaPredicted RBP30.76■■■□□ 2.51
ACTR10-210ENST00000556243 GRIN2BQ13224 1484 aa30.76■■■□□ 2.51
ACTR10-210ENST00000556243 CLASP1Q7Z460 1538 aa30.68■■■□□ 2.5
ACTR10-210ENST00000556243 SUPT5HO00267 1087 aaKnown RBP30.68■■■□□ 2.5
ACTR10-210ENST00000556243 SYNJ1O43426 1573 aa30.67■■■□□ 2.5
ACTR10-210ENST00000556243 SYNJ2O15056 1496 aa30.67■■■□□ 2.5
ACTR10-210ENST00000556243 GAPVD1Q14C86 1478 aa30.63■■■□□ 2.49
ACTR10-210ENST00000556243 ABCA10Q8WWZ4 1543 aa30.6■■■□□ 2.49
ACTR10-210ENST00000556243 PBRM1Q86U86 1689 aa30.58■■■□□ 2.49
ACTR10-210ENST00000556243 TRHP20396 242 aaPredicted RBP30.57■■■□□ 2.48
ACTR10-210ENST00000556243 ABCA5Q8WWZ7 1642 aa30.53■■■□□ 2.48
ACTR10-210ENST00000556243 WRNQ14191 1432 aaPredicted RBP eCLIP30.47■■■□□ 2.47
ACTR10-210ENST00000556243 TOP2BQ02880 1626 aa30.38■■■□□ 2.45
ACTR10-210ENST00000556243 BIVM-ERCC5R4GMW8 1640 aa30.37■■■□□ 2.45
ACTR10-210ENST00000556243 GRIN2AQ12879 1464 aa30.35■■■□□ 2.45
ACTR10-210ENST00000556243 ADAMTS12P58397 1594 aa30.29■■■□□ 2.44
ACTR10-210ENST00000556243 NUP160Q12769 1436 aa30.27■■■□□ 2.44
ACTR10-210ENST00000556243 FHAD1B1AJZ9 1412 aa30.26■■■□□ 2.43
ACTR10-210ENST00000556243 ERICH3Q5RHP9 1530 aa30.22■■■□□ 2.43
ACTR10-210ENST00000556243 CEP170Q5SW79 1584 aa30.22■■■□□ 2.43
ACTR10-210ENST00000556243 ERCC6L2Q5T890 1561 aa30.16■■■□□ 2.42
ACTR10-210ENST00000556243 SHROOM2Q13796 1616 aa30.12■■■□□ 2.41
ACTR10-210ENST00000556243 JPH4Q96JJ6 628 aa29.99■■■□□ 2.39
ACTR10-210ENST00000556243 PRG4Q92954 1404 aaPredicted RBP29.97■■■□□ 2.39
ACTR10-210ENST00000556243 RUSC2Q8N2Y8 1516 aa29.86■■■□□ 2.37
ACTR10-210ENST00000556243 IGF1RP08069 1367 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms