RNA–Protein interactions for RNA: ENST00000556146.1

CDK2-209, Transcript of cyclin dependent kinase 2, humanhuman

TSL 3

Gene CDK2, Length 911 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2-209ENST00000556146 NISCHQ9Y2I1 1504 aa24.4■■□□□ 1.5
CDK2-209ENST00000556146 CCDC180Q9P1Z9 1646 aa21.62■■□□□ 1.05
CDK2-209ENST00000556146 ABCC9O60706 1549 aa20.99■□□□□ 0.95
CDK2-209ENST00000556146 ZCCHC6Q5VYS8 1495 aaKnown RBP20.39■□□□□ 0.85
CDK2-209ENST00000556146 MYO15BQ96JP2 1530 aa20.27■□□□□ 0.84
CDK2-209ENST00000556146 NACADO15069 1562 aa20.27■□□□□ 0.84
CDK2-209ENST00000556146 DCAF1Q9Y4B6 1507 aa20.26■□□□□ 0.83
CDK2-209ENST00000556146 RB1CC1Q8TDY2 1594 aa20.21■□□□□ 0.83
CDK2-209ENST00000556146 DCAF8L2P0C7V8 631 aa20.12■□□□□ 0.81
CDK2-209ENST00000556146 UNC13AQ9UPW8 1703 aa19.76■□□□□ 0.75
CDK2-209ENST00000556146 SCRIBQ14160 1630 aa19.67■□□□□ 0.74
CDK2-209ENST00000556146 PABPN1Q86U42 306 aaKnown RBP eCLIP19.62■□□□□ 0.73
CDK2-209ENST00000556146 BICRAQ9NZM4 1560 aa19.61■□□□□ 0.73
CDK2-209ENST00000556146 SHROOM4Q9ULL8 1493 aa19.48■□□□□ 0.71
CDK2-209ENST00000556146 DNAJC5BQ9UF47 199 aa19.42■□□□□ 0.7
CDK2-209ENST00000556146 EIF4G1Q04637 1599 aaKnown RBP19.06■□□□□ 0.64
CDK2-209ENST00000556146 CC2D2AQ9P2K1 1620 aa18.96■□□□□ 0.63
CDK2-209ENST00000556146 CECR2Q9BXF3 1484 aa18.96■□□□□ 0.63
CDK2-209ENST00000556146 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.62
CDK2-209ENST00000556146 SMARCA4P51532 1647 aa18.89■□□□□ 0.61
CDK2-209ENST00000556146 MROH2BQ7Z745 1585 aa18.79■□□□□ 0.6
CDK2-209ENST00000556146 PEG3Q9GZU2 1588 aa18.74■□□□□ 0.59
CDK2-209ENST00000556146 ATAD2BQ9ULI0 1458 aa18.72■□□□□ 0.59
CDK2-209ENST00000556146 SMARCA2P51531 1590 aa18.72■□□□□ 0.59
CDK2-209ENST00000556146 NCAPD3P42695 1498 aa18.7■□□□□ 0.58
CDK2-209ENST00000556146 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
CDK2-209ENST00000556146 HMGXB3Q12766 1538 aa18.64■□□□□ 0.57
CDK2-209ENST00000556146 WIZO95785 1651 aa18.58■□□□□ 0.57
CDK2-209ENST00000556146 BAZ1BQ9UIG0 1483 aaKnown RBP18.55■□□□□ 0.56
CDK2-209ENST00000556146 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
CDK2-209ENST00000556146 SUPT5HO00267 1087 aaKnown RBP18.23■□□□□ 0.51
CDK2-209ENST00000556146 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
CDK2-209ENST00000556146 LAMC3Q9Y6N6 1575 aa18.16■□□□□ 0.5
CDK2-209ENST00000556146 CADPSQ9ULU8 1353 aa18.14■□□□□ 0.49
CDK2-209ENST00000556146 NESP48681 1621 aa18.13■□□□□ 0.49
CDK2-209ENST00000556146 CFTRP13569 1480 aa18.1■□□□□ 0.49
CDK2-209ENST00000556146 ERCC6Q03468 1493 aa18.1■□□□□ 0.49
CDK2-209ENST00000556146 PDS5BQ9NTI5 1447 aa18■□□□□ 0.47
CDK2-209ENST00000556146 PRDM2Q13029 1718 aa17.98■□□□□ 0.47
CDK2-209ENST00000556146 CUX2O14529 1486 aa17.95■□□□□ 0.46
CDK2-209ENST00000556146 KIF21AQ7Z4S6 1674 aa17.93■□□□□ 0.46
CDK2-209ENST00000556146 FANCD2Q9BXW9 1451 aa17.92■□□□□ 0.46
CDK2-209ENST00000556146 CEP164Q9UPV0 1460 aa17.88■□□□□ 0.45
CDK2-209ENST00000556146 THOC2Q8NI27 1593 aaKnown RBP17.86■□□□□ 0.45
CDK2-209ENST00000556146 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
CDK2-209ENST00000556146 WDR62O43379 1518 aa17.77■□□□□ 0.44
CDK2-209ENST00000556146 URB2Q14146 1524 aaKnown RBP17.74■□□□□ 0.43
CDK2-209ENST00000556146 ABCC8Q09428 1581 aa17.7■□□□□ 0.42
CDK2-209ENST00000556146 DNMBPQ6XZF7 1577 aa17.68■□□□□ 0.42
CDK2-209ENST00000556146 TOPBP1Q92547 1522 aa17.67■□□□□ 0.42
CDK2-209ENST00000556146 CUX1P39880 1505 aa17.62■□□□□ 0.41
CDK2-209ENST00000556146 DNAJC5Q9H3Z4 198 aa17.58■□□□□ 0.4
CDK2-209ENST00000556146 WRNQ14191 1432 aaPredicted RBP eCLIP17.57■□□□□ 0.4
CDK2-209ENST00000556146 BIVM-ERCC5R4GMW8 1640 aa17.54■□□□□ 0.4
CDK2-209ENST00000556146 TOP2BQ02880 1626 aa17.54■□□□□ 0.4
CDK2-209ENST00000556146 POLA1P09884 1462 aaPredicted RBP17.53■□□□□ 0.4
CDK2-209ENST00000556146 SYNJ1O43426 1573 aa17.53■□□□□ 0.4
CDK2-209ENST00000556146 FGD5Q6ZNL6 1462 aa17.51■□□□□ 0.39
CDK2-209ENST00000556146 IFT140Q96RY7 1462 aa17.51■□□□□ 0.39
CDK2-209ENST00000556146 TARBP1Q13395 1621 aaKnown RBP17.48■□□□□ 0.39
CDK2-209ENST00000556146 SOGA1O94964 1423 aa17.44■□□□□ 0.38
CDK2-209ENST00000556146 RAD54L2Q9Y4B4 1467 aa17.43■□□□□ 0.38
CDK2-209ENST00000556146 CHIC1Q5VXU3 224 aa17.42■□□□□ 0.38
CDK2-209ENST00000556146 WDR97A6NE52 1622 aa17.4■□□□□ 0.38
CDK2-209ENST00000556146 ABCA10Q8WWZ4 1543 aa17.39■□□□□ 0.37
CDK2-209ENST00000556146 ZNF608Q9ULD9 1512 aaPredicted RBP17.38■□□□□ 0.37
CDK2-209ENST00000556146 EIF4G3O43432 1585 aaKnown RBP17.34■□□□□ 0.37
CDK2-209ENST00000556146 ABCA5Q8WWZ7 1642 aa17.3■□□□□ 0.36
CDK2-209ENST00000556146 AQRO60306 1485 aaKnown RBP eCLIP17.3■□□□□ 0.364e-43■■■■■ 96.5
CDK2-209ENST00000556146 TDRD9Q8NDG6 1382 aaKnown RBP17.29■□□□□ 0.36
CDK2-209ENST00000556146 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
CDK2-209ENST00000556146 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
CDK2-209ENST00000556146 GRIN2BQ13224 1484 aa17.24■□□□□ 0.35
CDK2-209ENST00000556146 PBRM1Q86U86 1689 aa17.21■□□□□ 0.35
CDK2-209ENST00000556146 OSCARQ8IYS5 282 aa17.19■□□□□ 0.34
CDK2-209ENST00000556146 KIF27Q86VH2 1401 aa17.19■□□□□ 0.34
CDK2-209ENST00000556146 MAGI1Q96QZ7 1491 aaPredicted RBP17.18■□□□□ 0.34
CDK2-209ENST00000556146 ERICH3Q5RHP9 1530 aa17.18■□□□□ 0.34
CDK2-209ENST00000556146 SNAPC4Q5SXM2 1469 aa17.16■□□□□ 0.34
CDK2-209ENST00000556146 ADAMTS12P58397 1594 aa17.11■□□□□ 0.33
CDK2-209ENST00000556146 IGF1RP08069 1367 aa17.1■□□□□ 0.33
CDK2-209ENST00000556146 SYNJ2O15056 1496 aa17.1■□□□□ 0.33
CDK2-209ENST00000556146 RUSC2Q8N2Y8 1516 aa17.08■□□□□ 0.32
CDK2-209ENST00000556146 FHAD1B1AJZ9 1412 aa17.08■□□□□ 0.32
CDK2-209ENST00000556146 CHD1O14646 1710 aa17.07■□□□□ 0.32
CDK2-209ENST00000556146 CUL7Q14999 1698 aa17.06■□□□□ 0.32
CDK2-209ENST00000556146 FBLN2P98095 1184 aa17.04■□□□□ 0.32
CDK2-209ENST00000556146 EEA1Q15075 1411 aa17.04■□□□□ 0.32
CDK2-209ENST00000556146 GRIN2AQ12879 1464 aa17.01■□□□□ 0.31
CDK2-209ENST00000556146 AEBP2Q6ZN18 517 aaPredicted RBP17.01■□□□□ 0.31
CDK2-209ENST00000556146 CHMP7Q8WUX9 453 aaPredicted RBP17■□□□□ 0.31
CDK2-209ENST00000556146 CARMIL1Q5VZK9 1371 aa16.99■□□□□ 0.31
CDK2-209ENST00000556146 NUP160Q12769 1436 aa16.96■□□□□ 0.3
CDK2-209ENST00000556146 PRXQ9BXM0 1461 aa16.95■□□□□ 0.3
CDK2-209ENST00000556146 CLASP1Q7Z460 1538 aa16.93■□□□□ 0.3
CDK2-209ENST00000556146 CSRNP3Q8WYN3 585 aa16.93■□□□□ 0.3
CDK2-209ENST00000556146 RAPGEF2Q9Y4G8 1499 aa16.93■□□□□ 0.3
CDK2-209ENST00000556146 CEP170Q5SW79 1584 aa16.92■□□□□ 0.3
CDK2-209ENST00000556146 RIMBP3CA6NJZ7 1639 aa16.92■□□□□ 0.3
CDK2-209ENST00000556146 RIMBP3BA6NNM3 1639 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms