RNA–Protein interactions for RNA: ENST00000556125.5

SLC39A9-208, Transcript of solute carrier family 39 member 9, humanhuman

TSL 3

Gene SLC39A9, Length 944 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A9-208ENST00000556125 NISCHQ9Y2I1 1504 aa49.6■■■■■ 5.53
SLC39A9-208ENST00000556125 CCDC180Q9P1Z9 1646 aa44.39■■■■■ 4.7
SLC39A9-208ENST00000556125 ABCC9O60706 1549 aa44.1■■■■■ 4.65
SLC39A9-208ENST00000556125 RB1CC1Q8TDY2 1594 aa42.13■■■■■ 4.33
SLC39A9-208ENST00000556125 NACADO15069 1562 aa41.93■■■■■ 4.3
SLC39A9-208ENST00000556125 DCAF8L2P0C7V8 631 aa41.71■■■■■ 4.27
SLC39A9-208ENST00000556125 MYO15BQ96JP2 1530 aa41.48■■■■■ 4.23
SLC39A9-208ENST00000556125 ZCCHC6Q5VYS8 1495 aaKnown RBP41.17■■■■■ 4.18
SLC39A9-208ENST00000556125 DNAJC5BQ9UF47 199 aa41.15■■■■■ 4.18
SLC39A9-208ENST00000556125 UNC13AQ9UPW8 1703 aa41.13■■■■■ 4.18
SLC39A9-208ENST00000556125 PABPN1Q86U42 306 aaKnown RBP eCLIP41.11■■■■■ 4.17
SLC39A9-208ENST00000556125 DCAF1Q9Y4B6 1507 aa41.03■■■■■ 4.16
SLC39A9-208ENST00000556125 BICRAQ9NZM4 1560 aa40.88■■■■■ 4.13
SLC39A9-208ENST00000556125 SCRIBQ14160 1630 aa40.43■■■■■ 4.06
SLC39A9-208ENST00000556125 SHROOM4Q9ULL8 1493 aa40.42■■■■■ 4.06
SLC39A9-208ENST00000556125 CC2D2AQ9P2K1 1620 aa39.87■■■■□ 3.97
SLC39A9-208ENST00000556125 EIF4G1Q04637 1599 aaKnown RBP39.86■■■■□ 3.97
SLC39A9-208ENST00000556125 CECR2Q9BXF3 1484 aa39.72■■■■□ 3.95
SLC39A9-208ENST00000556125 NCAPD3P42695 1498 aa38.71■■■■□ 3.79
SLC39A9-208ENST00000556125 SMARCA4P51532 1647 aa38.63■■■■□ 3.77
SLC39A9-208ENST00000556125 ATAD2BQ9ULI0 1458 aa38.61■■■■□ 3.77
SLC39A9-208ENST00000556125 SMARCA2P51531 1590 aa38.53■■■■□ 3.76
SLC39A9-208ENST00000556125 BAZ1AQ9NRL2 1556 aaPredicted RBP38.49■■■■□ 3.75
SLC39A9-208ENST00000556125 HMGXB3Q12766 1538 aa38.43■■■■□ 3.74
SLC39A9-208ENST00000556125 PEG3Q9GZU2 1588 aa38.28■■■■□ 3.72
SLC39A9-208ENST00000556125 BAZ1BQ9UIG0 1483 aaKnown RBP38.24■■■■□ 3.71
SLC39A9-208ENST00000556125 MROH2BQ7Z745 1585 aa38.21■■■■□ 3.71
SLC39A9-208ENST00000556125 ERCC6Q03468 1493 aa38.07■■■■□ 3.68
SLC39A9-208ENST00000556125 NESP48681 1621 aa37.97■■■■□ 3.67
SLC39A9-208ENST00000556125 CUX2O14529 1486 aa37.95■■■■□ 3.67
SLC39A9-208ENST00000556125 LAMC3Q9Y6N6 1575 aa37.78■■■■□ 3.64
SLC39A9-208ENST00000556125 WIZO95785 1651 aa37.75■■■■□ 3.63
SLC39A9-208ENST00000556125 DNAJC5Q9H3Z4 198 aa37.62■■■■□ 3.61
SLC39A9-208ENST00000556125 PDS5BQ9NTI5 1447 aa37.56■■■■□ 3.6
SLC39A9-208ENST00000556125 THOC2Q8NI27 1593 aaKnown RBP37.54■■■■□ 3.6
SLC39A9-208ENST00000556125 CADPSQ9ULU8 1353 aa37.54■■■■□ 3.6
SLC39A9-208ENST00000556125 RSF1Q96T23 1441 aaPredicted RBP37.53■■■■□ 3.6
SLC39A9-208ENST00000556125 KIF21AQ7Z4S6 1674 aa37.47■■■■□ 3.59
SLC39A9-208ENST00000556125 TOP2AP11388 1531 aaKnown RBP37.31■■■■□ 3.56
SLC39A9-208ENST00000556125 MRC2Q9UBG0 1479 aa37.2■■■■□ 3.55
SLC39A9-208ENST00000556125 CFTRP13569 1480 aa37.17■■■■□ 3.54
SLC39A9-208ENST00000556125 WDR62O43379 1518 aa37.11■■■■□ 3.53
SLC39A9-208ENST00000556125 CEP164Q9UPV0 1460 aa37.11■■■■□ 3.53
SLC39A9-208ENST00000556125 FANCD2Q9BXW9 1451 aa37.1■■■■□ 3.53
SLC39A9-208ENST00000556125 CCDC88BA6NC98 1476 aa36.89■■■■□ 3.5
SLC39A9-208ENST00000556125 PRDM2Q13029 1718 aa36.77■■■■□ 3.48
SLC39A9-208ENST00000556125 URB2Q14146 1524 aaKnown RBP36.77■■■■□ 3.48
SLC39A9-208ENST00000556125 TOPBP1Q92547 1522 aa36.42■■■■□ 3.42
SLC39A9-208ENST00000556125 ABCC8Q09428 1581 aa36.4■■■■□ 3.42
SLC39A9-208ENST00000556125 IFT140Q96RY7 1462 aa36.37■■■■□ 3.41
SLC39A9-208ENST00000556125 DNMBPQ6XZF7 1577 aa36.32■■■■□ 3.4
SLC39A9-208ENST00000556125 ZNF608Q9ULD9 1512 aaPredicted RBP36.26■■■■□ 3.4
SLC39A9-208ENST00000556125 OSCARQ8IYS5 282 aa36.26■■■■□ 3.4
SLC39A9-208ENST00000556125 TARBP1Q13395 1621 aaKnown RBP36.08■■■■□ 3.37
SLC39A9-208ENST00000556125 EIF4G3O43432 1585 aaKnown RBP36.07■■■■□ 3.37
SLC39A9-208ENST00000556125 POLA1P09884 1462 aaPredicted RBP36.07■■■■□ 3.37
SLC39A9-208ENST00000556125 SUPT5HO00267 1087 aaKnown RBP36.03■■■■□ 3.36
SLC39A9-208ENST00000556125 TRIM41Q8WV44 630 aa36.03■■■■□ 3.36
SLC39A9-208ENST00000556125 AQRO60306 1485 aaKnown RBP eCLIP35.97■■■■□ 3.35
SLC39A9-208ENST00000556125 RAD54L2Q9Y4B4 1467 aa35.92■■■■□ 3.34
SLC39A9-208ENST00000556125 SOGA1O94964 1423 aa35.91■■■■□ 3.34
SLC39A9-208ENST00000556125 CUX1P39880 1505 aa35.88■■■■□ 3.33
SLC39A9-208ENST00000556125 FGD5Q6ZNL6 1462 aa35.87■■■■□ 3.33
SLC39A9-208ENST00000556125 TDRD9Q8NDG6 1382 aaKnown RBP35.79■■■■□ 3.32
SLC39A9-208ENST00000556125 WDR97A6NE52 1622 aa35.76■■■■□ 3.32
SLC39A9-208ENST00000556125 CHD1O14646 1710 aa35.73■■■■□ 3.31
SLC39A9-208ENST00000556125 RIMBP3CA6NJZ7 1639 aa35.72■■■■□ 3.31
SLC39A9-208ENST00000556125 RIMBP3BA6NNM3 1639 aa35.72■■■■□ 3.31
SLC39A9-208ENST00000556125 RIMBP3Q9UFD9 1639 aa35.72■■■■□ 3.31
SLC39A9-208ENST00000556125 FBLN2P98095 1184 aa35.66■■■■□ 3.3
SLC39A9-208ENST00000556125 ARHGEF11O15085 1522 aa35.65■■■■□ 3.3
SLC39A9-208ENST00000556125 SNAPC4Q5SXM2 1469 aa35.61■■■■□ 3.29
SLC39A9-208ENST00000556125 GRIN2BQ13224 1484 aa35.58■■■■□ 3.29
SLC39A9-208ENST00000556125 MAGI1Q96QZ7 1491 aaPredicted RBP35.55■■■■□ 3.28
SLC39A9-208ENST00000556125 ABCA10Q8WWZ4 1543 aa35.51■■■■□ 3.27
SLC39A9-208ENST00000556125 GAPVD1Q14C86 1478 aa35.48■■■■□ 3.27
SLC39A9-208ENST00000556125 CHMP7Q8WUX9 453 aaPredicted RBP35.48■■■■□ 3.27
SLC39A9-208ENST00000556125 SYNJ2O15056 1496 aa35.43■■■■□ 3.26
SLC39A9-208ENST00000556125 PBRM1Q86U86 1689 aa35.42■■■■□ 3.26
SLC39A9-208ENST00000556125 WRNQ14191 1432 aaPredicted RBP eCLIP35.41■■■■□ 3.26
SLC39A9-208ENST00000556125 ABCA5Q8WWZ7 1642 aa35.41■■■■□ 3.26
SLC39A9-208ENST00000556125 TOP2BQ02880 1626 aa35.39■■■■□ 3.26
SLC39A9-208ENST00000556125 BIVM-ERCC5R4GMW8 1640 aa35.39■■■■□ 3.26
SLC39A9-208ENST00000556125 CLASP1Q7Z460 1538 aa35.37■■■■□ 3.25
SLC39A9-208ENST00000556125 SYNJ1O43426 1573 aa35.37■■■■□ 3.25
SLC39A9-208ENST00000556125 CYB5RLQ6IPT4 315 aa35.36■■■■□ 3.25
SLC39A9-208ENST00000556125 ARAP1Q96P48 1450 aa35.32■■■■□ 3.24
SLC39A9-208ENST00000556125 ADAMTS12P58397 1594 aa35.12■■■■□ 3.21
SLC39A9-208ENST00000556125 GRIN2AQ12879 1464 aa35.11■■■■□ 3.21
SLC39A9-208ENST00000556125 ERICH3Q5RHP9 1530 aa35.06■■■■□ 3.2
SLC39A9-208ENST00000556125 FHAD1B1AJZ9 1412 aa35.06■■■■□ 3.2
SLC39A9-208ENST00000556125 NUP160Q12769 1436 aa35■■■■□ 3.19
SLC39A9-208ENST00000556125 CEP170Q5SW79 1584 aa34.96■■■■□ 3.19
SLC39A9-208ENST00000556125 TRHP20396 242 aaPredicted RBP34.88■■■■□ 3.17
SLC39A9-208ENST00000556125 ERCC6L2Q5T890 1561 aa34.81■■■■□ 3.16
SLC39A9-208ENST00000556125 SHROOM2Q13796 1616 aa34.81■■■■□ 3.16
SLC39A9-208ENST00000556125 KIF27Q86VH2 1401 aa34.72■■■■□ 3.15
SLC39A9-208ENST00000556125 IGF1RP08069 1367 aa34.68■■■■□ 3.14
SLC39A9-208ENST00000556125 JPH4Q96JJ6 628 aa34.64■■■■□ 3.14
SLC39A9-208ENST00000556125 PRG4Q92954 1404 aaPredicted RBP34.63■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms