RNA–Protein interactions for RNA: ENST00000556004.1

HECTD1-212, Transcript of HECT domain E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene HECTD1, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD1-212ENST00000556004 AEBP2Q6ZN18 517 aaPredicted RBP26.71■■□□□ 1.87
HECTD1-212ENST00000556004 CHIC1Q5VXU3 224 aa26.41■■□□□ 1.82
HECTD1-212ENST00000556004 PHF23Q9BUL5 403 aaPredicted RBP23.32■■□□□ 1.32
HECTD1-212ENST00000556004 NISCHQ9Y2I1 1504 aa22.64■■□□□ 1.21
HECTD1-212ENST00000556004 SENP3Q9H4L4 574 aaPredicted RBP22.49■■□□□ 1.19
HECTD1-212ENST00000556004 PLPPR3Q6T4P5 718 aa21.55■■□□□ 1.04
HECTD1-212ENST00000556004 FOXD1Q16676 465 aa20.88■□□□□ 0.93
HECTD1-212ENST00000556004 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
HECTD1-212ENST00000556004 ABCC9O60706 1549 aa20.46■□□□□ 0.87
HECTD1-212ENST00000556004 PPP6R1Q9UPN7 881 aa20.42■□□□□ 0.86
HECTD1-212ENST00000556004 ADRA2BP18089 450 aa20.37■□□□□ 0.85
HECTD1-212ENST00000556004 PIAS4Q8N2W9 510 aaPredicted RBP19.7■□□□□ 0.74
HECTD1-212ENST00000556004 RB1CC1Q8TDY2 1594 aa19.49■□□□□ 0.71
HECTD1-212ENST00000556004 NACADO15069 1562 aa19.32■□□□□ 0.68
HECTD1-212ENST00000556004 UNC13AQ9UPW8 1703 aa19.31■□□□□ 0.68
HECTD1-212ENST00000556004 DNAJC5BQ9UF47 199 aa19.23■□□□□ 0.67
HECTD1-212ENST00000556004 KCNA4P22459 653 aa19.09■□□□□ 0.65
HECTD1-212ENST00000556004 PPP4R3CPQ6ZMV5 832 aa19.05■□□□□ 0.64
HECTD1-212ENST00000556004 MSH5O43196 834 aa19.03■□□□□ 0.64
HECTD1-212ENST00000556004 MYO15BQ96JP2 1530 aa19.01■□□□□ 0.63
HECTD1-212ENST00000556004 BICRAQ9NZM4 1560 aa19.01■□□□□ 0.63
HECTD1-212ENST00000556004 PABPN1Q86U42 306 aaKnown RBP eCLIP18.89■□□□□ 0.61
HECTD1-212ENST00000556004 DCAF8L2P0C7V8 631 aa18.85■□□□□ 0.61
HECTD1-212ENST00000556004 POTEDQ86YR6 584 aa18.84■□□□□ 0.61
HECTD1-212ENST00000556004 ZCCHC6Q5VYS8 1495 aaKnown RBP18.78■□□□□ 0.6
HECTD1-212ENST00000556004 DCAF1Q9Y4B6 1507 aa18.73■□□□□ 0.59
HECTD1-212ENST00000556004 SHROOM4Q9ULL8 1493 aa18.68■□□□□ 0.58
HECTD1-212ENST00000556004 SCRIBQ14160 1630 aa18.63■□□□□ 0.57
HECTD1-212ENST00000556004 NCBP3Q53F19 620 aaKnown RBP18.58■□□□□ 0.56
HECTD1-212ENST00000556004 CC2D2AQ9P2K1 1620 aa18.58■□□□□ 0.56
HECTD1-212ENST00000556004 SCAF1Q9H7N4 1312 aaKnown RBP18.52■□□□□ 0.56
HECTD1-212ENST00000556004 EIF4G1Q04637 1599 aaKnown RBP18.5■□□□□ 0.55
HECTD1-212ENST00000556004 CECR2Q9BXF3 1484 aa18.44■□□□□ 0.54
HECTD1-212ENST00000556004 NPM3O75607 178 aaKnown RBP18.43■□□□□ 0.54
HECTD1-212ENST00000556004 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
HECTD1-212ENST00000556004 MAPK8IP2Q13387 824 aaPredicted RBP18.38■□□□□ 0.53
HECTD1-212ENST00000556004 SLC4A1APQ9BWU0 796 aaKnown RBP18.17■□□□□ 0.5
HECTD1-212ENST00000556004 EHMT2Q96KQ7 1210 aa18.07■□□□□ 0.48
HECTD1-212ENST00000556004 DMRT2Q9Y5R5 561 aa18.07■□□□□ 0.48
HECTD1-212ENST00000556004 RNF216Q9NWF9 866 aaPredicted RBP18■□□□□ 0.47
HECTD1-212ENST00000556004 HOXD11P31277 338 aaPredicted RBP17.87■□□□□ 0.45
HECTD1-212ENST00000556004 CSRNP3Q8WYN3 585 aa17.81■□□□□ 0.44
HECTD1-212ENST00000556004 SMARCA4P51532 1647 aa17.78■□□□□ 0.44
HECTD1-212ENST00000556004 NCAPD3P42695 1498 aa17.76■□□□□ 0.43
HECTD1-212ENST00000556004 HMGXB3Q12766 1538 aa17.73■□□□□ 0.43
HECTD1-212ENST00000556004 CUX2O14529 1486 aa17.72■□□□□ 0.43
HECTD1-212ENST00000556004 ATAD2BQ9ULI0 1458 aa17.71■□□□□ 0.43
HECTD1-212ENST00000556004 DNAJC5Q9H3Z4 198 aa17.7■□□□□ 0.42
HECTD1-212ENST00000556004 SMARCA2P51531 1590 aa17.69■□□□□ 0.42
HECTD1-212ENST00000556004 ZBTB22O15209 634 aa17.65■□□□□ 0.42
HECTD1-212ENST00000556004 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
HECTD1-212ENST00000556004 PEG3Q9GZU2 1588 aa17.62■□□□□ 0.41
HECTD1-212ENST00000556004 BAZ1AQ9NRL2 1556 aaPredicted RBP17.6■□□□□ 0.41
HECTD1-212ENST00000556004 NESP48681 1621 aa17.58■□□□□ 0.41
HECTD1-212ENST00000556004 THOC2Q8NI27 1593 aaKnown RBP17.57■□□□□ 0.4
HECTD1-212ENST00000556004 BAZ1BQ9UIG0 1483 aaKnown RBP17.53■□□□□ 0.4
HECTD1-212ENST00000556004 KIF21AQ7Z4S6 1674 aa17.52■□□□□ 0.4
HECTD1-212ENST00000556004 LAMC3Q9Y6N6 1575 aa17.48■□□□□ 0.39
HECTD1-212ENST00000556004 MROH2BQ7Z745 1585 aa17.45■□□□□ 0.38
HECTD1-212ENST00000556004 FOXD4L1Q9NU39 408 aa17.42■□□□□ 0.38
HECTD1-212ENST00000556004 SLC4A2P04920 1241 aa17.36■□□□□ 0.37
HECTD1-212ENST00000556004 WIZO95785 1651 aa17.32■□□□□ 0.36
HECTD1-212ENST00000556004 PDS5BQ9NTI5 1447 aa17.23■□□□□ 0.35
HECTD1-212ENST00000556004 WDR62O43379 1518 aa17.22■□□□□ 0.35
HECTD1-212ENST00000556004 MRC2Q9UBG0 1479 aa17.18■□□□□ 0.34
HECTD1-212ENST00000556004 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
HECTD1-212ENST00000556004 PRDM2Q13029 1718 aa17.14■□□□□ 0.33
HECTD1-212ENST00000556004 CEP164Q9UPV0 1460 aa17.08■□□□□ 0.32
HECTD1-212ENST00000556004 DCAF8L1A6NGE4 600 aa17.07■□□□□ 0.32
HECTD1-212ENST00000556004 TOP2AP11388 1531 aaKnown RBP17.05■□□□□ 0.32
HECTD1-212ENST00000556004 FANCD2Q9BXW9 1451 aa17.04■□□□□ 0.32
HECTD1-212ENST00000556004 CFTRP13569 1480 aa17.01■□□□□ 0.31
HECTD1-212ENST00000556004 MYCNP04198 464 aaPredicted RBP16.98■□□□□ 0.31
HECTD1-212ENST00000556004 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.31
HECTD1-212ENST00000556004 URB2Q14146 1524 aaKnown RBP16.96■□□□□ 0.31
HECTD1-212ENST00000556004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.87■□□□□ 0.295e-14■□□□□ 8.1
HECTD1-212ENST00000556004 TRIM41Q8WV44 630 aa16.83■□□□□ 0.28
HECTD1-212ENST00000556004 ATXN8OSP0DMR3 200 aa16.79■□□□□ 0.28
HECTD1-212ENST00000556004 U3KPZ7 1027 aaPredicted RBP16.78■□□□□ 0.28
HECTD1-212ENST00000556004 RIMBP3CA6NJZ7 1639 aa16.78■□□□□ 0.28
HECTD1-212ENST00000556004 RIMBP3BA6NNM3 1639 aa16.78■□□□□ 0.28
HECTD1-212ENST00000556004 RIMBP3Q9UFD9 1639 aa16.78■□□□□ 0.28
HECTD1-212ENST00000556004 CCDC88BA6NC98 1476 aa16.77■□□□□ 0.28
HECTD1-212ENST00000556004 EIF4G3O43432 1585 aaKnown RBP16.77■□□□□ 0.27
HECTD1-212ENST00000556004 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
HECTD1-212ENST00000556004 TOPBP1Q92547 1522 aa16.74■□□□□ 0.27
HECTD1-212ENST00000556004 CHD1O14646 1710 aa16.73■□□□□ 0.27
HECTD1-212ENST00000556004 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
HECTD1-212ENST00000556004 DNMBPQ6XZF7 1577 aa16.71■□□□□ 0.27
HECTD1-212ENST00000556004 TARBP1Q13395 1621 aaKnown RBP16.69■□□□□ 0.26
HECTD1-212ENST00000556004 OSCARQ8IYS5 282 aa16.68■□□□□ 0.26
HECTD1-212ENST00000556004 ARHGEF11O15085 1522 aa16.65■□□□□ 0.26
HECTD1-212ENST00000556004 ABCC8Q09428 1581 aa16.62■□□□□ 0.25
HECTD1-212ENST00000556004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.57■□□□□ 0.24
HECTD1-212ENST00000556004 HNRNPUL2Q1KMD3 747 aaKnown RBP16.57■□□□□ 0.24
HECTD1-212ENST00000556004 SAMD1Q6SPF0 538 aaPredicted RBP16.57■□□□□ 0.24
HECTD1-212ENST00000556004 ATF5Q9Y2D1 282 aaPredicted RBP16.57■□□□□ 0.24
HECTD1-212ENST00000556004 POLA1P09884 1462 aaPredicted RBP16.55■□□□□ 0.24
HECTD1-212ENST00000556004 WDR97A6NE52 1622 aa16.53■□□□□ 0.24
HECTD1-212ENST00000556004 AQRO60306 1485 aaKnown RBP eCLIP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms