RNA–Protein interactions for RNA: ENST00000555914.5

HNRNPC-222, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HNRNPC, Length 1,658 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-222ENST00000555914 NISCHQ9Y2I1 1504 aa22.19■■□□□ 1.14
HNRNPC-222ENST00000555914 ABCC9O60706 1549 aa19.91■□□□□ 0.78
HNRNPC-222ENST00000555914 CCDC180Q9P1Z9 1646 aa19.85■□□□□ 0.77
HNRNPC-222ENST00000555914 RB1CC1Q8TDY2 1594 aa18.89■□□□□ 0.61
HNRNPC-222ENST00000555914 DCAF8L2P0C7V8 631 aa18.78■□□□□ 0.6
HNRNPC-222ENST00000555914 NACADO15069 1562 aa18.76■□□□□ 0.59
HNRNPC-222ENST00000555914 DNAJC5BQ9UF47 199 aa18.7■□□□□ 0.58
HNRNPC-222ENST00000555914 PABPN1Q86U42 306 aaKnown RBP eCLIP18.57■□□□□ 0.56
HNRNPC-222ENST00000555914 UNC13AQ9UPW8 1703 aa18.53■□□□□ 0.56
HNRNPC-222ENST00000555914 MYO15BQ96JP2 1530 aa18.5■□□□□ 0.55
HNRNPC-222ENST00000555914 BICRAQ9NZM4 1560 aa18.4■□□□□ 0.54
HNRNPC-222ENST00000555914 ZCCHC6Q5VYS8 1495 aaKnown RBP18.4■□□□□ 0.54
HNRNPC-222ENST00000555914 DCAF1Q9Y4B6 1507 aa18.28■□□□□ 0.52
HNRNPC-222ENST00000555914 SCRIBQ14160 1630 aa18.16■□□□□ 0.5
HNRNPC-222ENST00000555914 SHROOM4Q9ULL8 1493 aa18.04■□□□□ 0.48
HNRNPC-222ENST00000555914 CC2D2AQ9P2K1 1620 aa17.97■□□□□ 0.47
HNRNPC-222ENST00000555914 EIF4G1Q04637 1599 aaKnown RBP17.93■□□□□ 0.46
HNRNPC-222ENST00000555914 CECR2Q9BXF3 1484 aa17.9■□□□□ 0.46
HNRNPC-222ENST00000555914 NCAPD3P42695 1498 aa17.35■□□□□ 0.37
HNRNPC-222ENST00000555914 ATAD2BQ9ULI0 1458 aa17.32■□□□□ 0.36
HNRNPC-222ENST00000555914 SMARCA4P51532 1647 aa17.3■□□□□ 0.36
HNRNPC-222ENST00000555914 SMARCA2P51531 1590 aa17.22■□□□□ 0.35
HNRNPC-222ENST00000555914 HMGXB3Q12766 1538 aa17.21■□□□□ 0.35
HNRNPC-222ENST00000555914 BAZ1AQ9NRL2 1556 aaPredicted RBP17.2■□□□□ 0.34
HNRNPC-222ENST00000555914 ERCC6Q03468 1493 aa17.14■□□□□ 0.33
HNRNPC-222ENST00000555914 MROH2BQ7Z745 1585 aa17.14■□□□□ 0.33
HNRNPC-222ENST00000555914 NESP48681 1621 aa17.13■□□□□ 0.33
HNRNPC-222ENST00000555914 BAZ1BQ9UIG0 1483 aaKnown RBP17.13■□□□□ 0.33
HNRNPC-222ENST00000555914 PEG3Q9GZU2 1588 aa17.12■□□□□ 0.33
HNRNPC-222ENST00000555914 CUX2O14529 1486 aa17.07■□□□□ 0.32
HNRNPC-222ENST00000555914 DNAJC5Q9H3Z4 198 aa17.07■□□□□ 0.32
HNRNPC-222ENST00000555914 WIZO95785 1651 aa16.94■□□□□ 0.3
HNRNPC-222ENST00000555914 LAMC3Q9Y6N6 1575 aa16.93■□□□□ 0.3
HNRNPC-222ENST00000555914 THOC2Q8NI27 1593 aaKnown RBP16.9■□□□□ 0.3
HNRNPC-222ENST00000555914 KIF21AQ7Z4S6 1674 aa16.88■□□□□ 0.29
HNRNPC-222ENST00000555914 PDS5BQ9NTI5 1447 aa16.84■□□□□ 0.29
HNRNPC-222ENST00000555914 CADPSQ9ULU8 1353 aa16.83■□□□□ 0.29
HNRNPC-222ENST00000555914 RSF1Q96T23 1441 aaPredicted RBP16.78■□□□□ 0.28
HNRNPC-222ENST00000555914 MRC2Q9UBG0 1479 aa16.69■□□□□ 0.26
HNRNPC-222ENST00000555914 WDR62O43379 1518 aa16.67■□□□□ 0.26
HNRNPC-222ENST00000555914 TOP2AP11388 1531 aaKnown RBP16.67■□□□□ 0.26
HNRNPC-222ENST00000555914 CFTRP13569 1480 aa16.65■□□□□ 0.26
HNRNPC-222ENST00000555914 AEBP2Q6ZN18 517 aaPredicted RBP16.65■□□□□ 0.26
HNRNPC-222ENST00000555914 FANCD2Q9BXW9 1451 aa16.65■□□□□ 0.26
HNRNPC-222ENST00000555914 CEP164Q9UPV0 1460 aa16.64■□□□□ 0.25
HNRNPC-222ENST00000555914 URB2Q14146 1524 aaKnown RBP16.53■□□□□ 0.24
HNRNPC-222ENST00000555914 CCDC88BA6NC98 1476 aa16.52■□□□□ 0.24
HNRNPC-222ENST00000555914 PRDM2Q13029 1718 aa16.46■□□□□ 0.23
HNRNPC-222ENST00000555914 TRIM41Q8WV44 630 aa16.37■□□□□ 0.21
HNRNPC-222ENST00000555914 TOPBP1Q92547 1522 aa16.34■□□□□ 0.21
HNRNPC-222ENST00000555914 ZNF608Q9ULD9 1512 aaPredicted RBP16.34■□□□□ 0.21
HNRNPC-222ENST00000555914 OSCARQ8IYS5 282 aa16.33■□□□□ 0.2
HNRNPC-222ENST00000555914 IFT140Q96RY7 1462 aa16.3■□□□□ 0.2
HNRNPC-222ENST00000555914 DNMBPQ6XZF7 1577 aa16.26■□□□□ 0.19
HNRNPC-222ENST00000555914 ABCC8Q09428 1581 aa16.24■□□□□ 0.19
HNRNPC-222ENST00000555914 EIF4G3O43432 1585 aaKnown RBP16.21■□□□□ 0.19
HNRNPC-222ENST00000555914 TARBP1Q13395 1621 aaKnown RBP16.2■□□□□ 0.18
HNRNPC-222ENST00000555914 AQRO60306 1485 aaKnown RBP eCLIP16.19■□□□□ 0.182e-7■■■■□ 24.5
HNRNPC-222ENST00000555914 POLA1P09884 1462 aaPredicted RBP16.19■□□□□ 0.18
HNRNPC-222ENST00000555914 RAD54L2Q9Y4B4 1467 aa16.15■□□□□ 0.18
HNRNPC-222ENST00000555914 RIMBP3CA6NJZ7 1639 aa16.13■□□□□ 0.17
HNRNPC-222ENST00000555914 RIMBP3BA6NNM3 1639 aa16.13■□□□□ 0.17
HNRNPC-222ENST00000555914 RIMBP3Q9UFD9 1639 aa16.13■□□□□ 0.17
HNRNPC-222ENST00000555914 TDRD9Q8NDG6 1382 aaKnown RBP16.1■□□□□ 0.17
HNRNPC-222ENST00000555914 SUPT5HO00267 1087 aaKnown RBP16.1■□□□□ 0.17
HNRNPC-222ENST00000555914 SOGA1O94964 1423 aa16.09■□□□□ 0.17
HNRNPC-222ENST00000555914 CHD1O14646 1710 aa16.09■□□□□ 0.17
HNRNPC-222ENST00000555914 ARHGEF11O15085 1522 aa16.08■□□□□ 0.17
HNRNPC-222ENST00000555914 CUX1P39880 1505 aa16.08■□□□□ 0.17
HNRNPC-222ENST00000555914 FGD5Q6ZNL6 1462 aa16.08■□□□□ 0.16
HNRNPC-222ENST00000555914 FBLN2P98095 1184 aa16.08■□□□□ 0.16
HNRNPC-222ENST00000555914 SNAPC4Q5SXM2 1469 aa16■□□□□ 0.15
HNRNPC-222ENST00000555914 CYB5RLQ6IPT4 315 aa15.99■□□□□ 0.15
HNRNPC-222ENST00000555914 WDR97A6NE52 1622 aa15.96■□□□□ 0.15
HNRNPC-222ENST00000555914 ARAP1Q96P48 1450 aa15.94■□□□□ 0.14
HNRNPC-222ENST00000555914 CHMP7Q8WUX9 453 aaPredicted RBP15.93■□□□□ 0.14
HNRNPC-222ENST00000555914 GRIN2BQ13224 1484 aa15.93■□□□□ 0.14
HNRNPC-222ENST00000555914 MAGI1Q96QZ7 1491 aaPredicted RBP15.92■□□□□ 0.14
HNRNPC-222ENST00000555914 GAPVD1Q14C86 1478 aa15.9■□□□□ 0.14
HNRNPC-222ENST00000555914 CLASP1Q7Z460 1538 aa15.89■□□□□ 0.13
HNRNPC-222ENST00000555914 PBRM1Q86U86 1689 aa15.89■□□□□ 0.13
HNRNPC-222ENST00000555914 ABCA10Q8WWZ4 1543 aa15.88■□□□□ 0.13
HNRNPC-222ENST00000555914 SYNJ2O15056 1496 aa15.88■□□□□ 0.13
HNRNPC-222ENST00000555914 ABCA5Q8WWZ7 1642 aa15.86■□□□□ 0.13
HNRNPC-222ENST00000555914 SYNJ1O43426 1573 aa15.85■□□□□ 0.13
HNRNPC-222ENST00000555914 TOP2BQ02880 1626 aa15.82■□□□□ 0.12
HNRNPC-222ENST00000555914 WRNQ14191 1432 aaPredicted RBP eCLIP15.81■□□□□ 0.12
HNRNPC-222ENST00000555914 BIVM-ERCC5R4GMW8 1640 aa15.8■□□□□ 0.12
HNRNPC-222ENST00000555914 TRHP20396 242 aaPredicted RBP15.78■□□□□ 0.12
HNRNPC-222ENST00000555914 GRIN2AQ12879 1464 aa15.75■□□□□ 0.11
HNRNPC-222ENST00000555914 ADAMTS12P58397 1594 aa15.73■□□□□ 0.11
HNRNPC-222ENST00000555914 ERCC6L2Q5T890 1561 aa15.71■□□□□ 0.11
HNRNPC-222ENST00000555914 CEP170Q5SW79 1584 aa15.71■□□□□ 0.11
HNRNPC-222ENST00000555914 NUP160Q12769 1436 aa15.69■□□□□ 0.1
HNRNPC-222ENST00000555914 FHAD1B1AJZ9 1412 aa15.68■□□□□ 0.1
HNRNPC-222ENST00000555914 ERICH3Q5RHP9 1530 aa15.67■□□□□ 0.1
HNRNPC-222ENST00000555914 SHROOM2Q13796 1616 aa15.61■□□□□ 0.09
HNRNPC-222ENST00000555914 CHIC1Q5VXU3 224 aa15.6■□□□□ 0.09
HNRNPC-222ENST00000555914 PRG4Q92954 1404 aaPredicted RBP15.55■□□□□ 0.08
HNRNPC-222ENST00000555914 JPH4Q96JJ6 628 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms