RNA–Protein interactions for RNA: ENST00000555856.1

KLC1-220, Transcript of kinesin light chain 1, humanhuman

TSL 3

Gene KLC1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLC1-220ENST00000555856 NISCHQ9Y2I1 1504 aa25.47■■□□□ 1.67
KLC1-220ENST00000555856 CCDC180Q9P1Z9 1646 aa22.67■■□□□ 1.22
KLC1-220ENST00000555856 ABCC9O60706 1549 aa22.41■■□□□ 1.18
KLC1-220ENST00000555856 DCAF8L2P0C7V8 631 aa21.64■■□□□ 1.05
KLC1-220ENST00000555856 RB1CC1Q8TDY2 1594 aa21.46■■□□□ 1.03
KLC1-220ENST00000555856 NACADO15069 1562 aa21.37■■□□□ 1.01
KLC1-220ENST00000555856 ZCCHC6Q5VYS8 1495 aaKnown RBP21.19■□□□□ 0.98
KLC1-220ENST00000555856 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
KLC1-220ENST00000555856 DCAF1Q9Y4B6 1507 aa21■□□□□ 0.95
KLC1-220ENST00000555856 PABPN1Q86U42 306 aaKnown RBP eCLIP20.97■□□□□ 0.95
KLC1-220ENST00000555856 UNC13AQ9UPW8 1703 aa20.87■□□□□ 0.93
KLC1-220ENST00000555856 SCRIBQ14160 1630 aa20.8■□□□□ 0.92
KLC1-220ENST00000555856 BICRAQ9NZM4 1560 aa20.68■□□□□ 0.9
KLC1-220ENST00000555856 DNAJC5BQ9UF47 199 aa20.54■□□□□ 0.88
KLC1-220ENST00000555856 SHROOM4Q9ULL8 1493 aa20.5■□□□□ 0.87
KLC1-220ENST00000555856 EIF4G1Q04637 1599 aaKnown RBP20.24■□□□□ 0.83
KLC1-220ENST00000555856 CC2D2AQ9P2K1 1620 aa20.2■□□□□ 0.82
KLC1-220ENST00000555856 CECR2Q9BXF3 1484 aa20.12■□□□□ 0.81
KLC1-220ENST00000555856 SMARCA4P51532 1647 aa19.8■□□□□ 0.76
KLC1-220ENST00000555856 BAZ1AQ9NRL2 1556 aaPredicted RBP19.8■□□□□ 0.76
KLC1-220ENST00000555856 SMARCA2P51531 1590 aa19.73■□□□□ 0.75
KLC1-220ENST00000555856 ATAD2BQ9ULI0 1458 aa19.72■□□□□ 0.75
KLC1-220ENST00000555856 NCAPD3P42695 1498 aa19.68■□□□□ 0.74
KLC1-220ENST00000555856 MROH2BQ7Z745 1585 aa19.65■□□□□ 0.74
KLC1-220ENST00000555856 BAZ1BQ9UIG0 1483 aaKnown RBP19.63■□□□□ 0.73
KLC1-220ENST00000555856 HMGXB3Q12766 1538 aa19.59■□□□□ 0.73
KLC1-220ENST00000555856 PEG3Q9GZU2 1588 aa19.52■□□□□ 0.71
KLC1-220ENST00000555856 WIZO95785 1651 aa19.45■□□□□ 0.7
KLC1-220ENST00000555856 ERCC6Q03468 1493 aa19.41■□□□□ 0.7
KLC1-220ENST00000555856 RSF1Q96T23 1441 aaPredicted RBP19.39■□□□□ 0.69
KLC1-220ENST00000555856 NESP48681 1621 aa19.31■□□□□ 0.68
KLC1-220ENST00000555856 TOP2AP11388 1531 aaKnown RBP19.23■□□□□ 0.67
KLC1-220ENST00000555856 LAMC3Q9Y6N6 1575 aa19.23■□□□□ 0.67
KLC1-220ENST00000555856 CADPSQ9ULU8 1353 aa19.18■□□□□ 0.66
KLC1-220ENST00000555856 PDS5BQ9NTI5 1447 aa19.17■□□□□ 0.66
KLC1-220ENST00000555856 CUX2O14529 1486 aa19.09■□□□□ 0.65
KLC1-220ENST00000555856 SUPT5HO00267 1087 aaKnown RBP19.07■□□□□ 0.64
KLC1-220ENST00000555856 KIF21AQ7Z4S6 1674 aa19.06■□□□□ 0.64
KLC1-220ENST00000555856 CCDC88BA6NC98 1476 aa19.02■□□□□ 0.63
KLC1-220ENST00000555856 CFTRP13569 1480 aa18.99■□□□□ 0.63
KLC1-220ENST00000555856 CEP164Q9UPV0 1460 aa18.99■□□□□ 0.63
KLC1-220ENST00000555856 FANCD2Q9BXW9 1451 aa18.98■□□□□ 0.63
KLC1-220ENST00000555856 THOC2Q8NI27 1593 aaKnown RBP18.97■□□□□ 0.63
KLC1-220ENST00000555856 MRC2Q9UBG0 1479 aa18.95■□□□□ 0.62
KLC1-220ENST00000555856 PRDM2Q13029 1718 aa18.84■□□□□ 0.61
KLC1-220ENST00000555856 WDR62O43379 1518 aa18.83■□□□□ 0.6
KLC1-220ENST00000555856 URB2Q14146 1524 aaKnown RBP18.74■□□□□ 0.59
KLC1-220ENST00000555856 ABCC8Q09428 1581 aa18.65■□□□□ 0.58
KLC1-220ENST00000555856 TOPBP1Q92547 1522 aa18.64■□□□□ 0.57
KLC1-220ENST00000555856 DNAJC5Q9H3Z4 198 aa18.62■□□□□ 0.57
KLC1-220ENST00000555856 DNMBPQ6XZF7 1577 aa18.61■□□□□ 0.57
KLC1-220ENST00000555856 IFT140Q96RY7 1462 aa18.57■□□□□ 0.56
KLC1-220ENST00000555856 ZNF608Q9ULD9 1512 aaPredicted RBP18.47■□□□□ 0.55
KLC1-220ENST00000555856 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.55
KLC1-220ENST00000555856 SOGA1O94964 1423 aa18.45■□□□□ 0.54
KLC1-220ENST00000555856 CUX1P39880 1505 aa18.44■□□□□ 0.54
KLC1-220ENST00000555856 FGD5Q6ZNL6 1462 aa18.44■□□□□ 0.54
KLC1-220ENST00000555856 RAD54L2Q9Y4B4 1467 aa18.42■□□□□ 0.54
KLC1-220ENST00000555856 EIF4G3O43432 1585 aaKnown RBP18.39■□□□□ 0.53
KLC1-220ENST00000555856 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.537e-6■■□□□ 12.2
KLC1-220ENST00000555856 OSCARQ8IYS5 282 aa18.38■□□□□ 0.53
KLC1-220ENST00000555856 FBLN2P98095 1184 aa18.37■□□□□ 0.53
KLC1-220ENST00000555856 TDRD9Q8NDG6 1382 aaKnown RBP18.37■□□□□ 0.53
KLC1-220ENST00000555856 TARBP1Q13395 1621 aaKnown RBP18.37■□□□□ 0.53
KLC1-220ENST00000555856 WRNQ14191 1432 aaPredicted RBP eCLIP18.36■□□□□ 0.53
KLC1-220ENST00000555856 TOP2BQ02880 1626 aa18.26■□□□□ 0.51
KLC1-220ENST00000555856 SYNJ1O43426 1573 aa18.25■□□□□ 0.51
KLC1-220ENST00000555856 WDR97A6NE52 1622 aa18.24■□□□□ 0.51
KLC1-220ENST00000555856 BIVM-ERCC5R4GMW8 1640 aa18.23■□□□□ 0.51
KLC1-220ENST00000555856 CHMP7Q8WUX9 453 aaPredicted RBP18.23■□□□□ 0.51
KLC1-220ENST00000555856 GRIN2BQ13224 1484 aa18.22■□□□□ 0.51
KLC1-220ENST00000555856 GAPVD1Q14C86 1478 aa18.22■□□□□ 0.51
KLC1-220ENST00000555856 SNAPC4Q5SXM2 1469 aa18.22■□□□□ 0.51
KLC1-220ENST00000555856 ABCA10Q8WWZ4 1543 aa18.21■□□□□ 0.51
KLC1-220ENST00000555856 CHD1O14646 1710 aa18.18■□□□□ 0.5
KLC1-220ENST00000555856 TRIM41Q8WV44 630 aa18.17■□□□□ 0.5
KLC1-220ENST00000555856 MAGI1Q96QZ7 1491 aaPredicted RBP18.16■□□□□ 0.5
KLC1-220ENST00000555856 PBRM1Q86U86 1689 aa18.15■□□□□ 0.5
KLC1-220ENST00000555856 ABCA5Q8WWZ7 1642 aa18.12■□□□□ 0.49
KLC1-220ENST00000555856 SYNJ2O15056 1496 aa18.1■□□□□ 0.49
KLC1-220ENST00000555856 AEBP2Q6ZN18 517 aaPredicted RBP18.06■□□□□ 0.48
KLC1-220ENST00000555856 FHAD1B1AJZ9 1412 aa18■□□□□ 0.47
KLC1-220ENST00000555856 KIF27Q86VH2 1401 aa18■□□□□ 0.47
KLC1-220ENST00000555856 ERICH3Q5RHP9 1530 aa18■□□□□ 0.47
KLC1-220ENST00000555856 RIMBP3CA6NJZ7 1639 aa18■□□□□ 0.47
KLC1-220ENST00000555856 RIMBP3BA6NNM3 1639 aa18■□□□□ 0.47
KLC1-220ENST00000555856 RIMBP3Q9UFD9 1639 aa18■□□□□ 0.47
KLC1-220ENST00000555856 ARHGEF11O15085 1522 aa17.99■□□□□ 0.47
KLC1-220ENST00000555856 ADAMTS12P58397 1594 aa17.99■□□□□ 0.47
KLC1-220ENST00000555856 GRIN2AQ12879 1464 aa17.97■□□□□ 0.47
KLC1-220ENST00000555856 CYB5RLQ6IPT4 315 aa17.96■□□□□ 0.47
KLC1-220ENST00000555856 CHIC1Q5VXU3 224 aa17.94■□□□□ 0.46
KLC1-220ENST00000555856 CLASP1Q7Z460 1538 aa17.92■□□□□ 0.46
KLC1-220ENST00000555856 IGF1RP08069 1367 aa17.86■□□□□ 0.45
KLC1-220ENST00000555856 CUL7Q14999 1698 aa17.85■□□□□ 0.45
KLC1-220ENST00000555856 CEP170Q5SW79 1584 aa17.85■□□□□ 0.45
KLC1-220ENST00000555856 NUP160Q12769 1436 aa17.84■□□□□ 0.45
KLC1-220ENST00000555856 CARMIL1Q5VZK9 1371 aa17.83■□□□□ 0.45
KLC1-220ENST00000555856 ARAP1Q96P48 1450 aa17.82■□□□□ 0.44
KLC1-220ENST00000555856 JPH4Q96JJ6 628 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms