RNA–Protein interactions for RNA: ENST00000555822.5

CCDC85C-204, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 5 BASIC

Gene CCDC85C, Length 930 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-204ENST00000555822 NISCHQ9Y2I1 1504 aa39.47■■■■□ 3.91
CCDC85C-204ENST00000555822 ABCC9O60706 1549 aa36.24■■■■□ 3.39
CCDC85C-204ENST00000555822 CCDC180Q9P1Z9 1646 aa35.54■■■■□ 3.28
CCDC85C-204ENST00000555822 DNAJC5BQ9UF47 199 aa34.68■■■■□ 3.14
CCDC85C-204ENST00000555822 RB1CC1Q8TDY2 1594 aa34.1■■■■□ 3.05
CCDC85C-204ENST00000555822 NACADO15069 1562 aa33.75■■■□□ 2.99
CCDC85C-204ENST00000555822 PABPN1Q86U42 306 aaKnown RBP eCLIP33.72■■■□□ 2.99
CCDC85C-204ENST00000555822 DCAF8L2P0C7V8 631 aa33.55■■■□□ 2.96
CCDC85C-204ENST00000555822 UNC13AQ9UPW8 1703 aa33.47■■■□□ 2.95
CCDC85C-204ENST00000555822 BICRAQ9NZM4 1560 aa33.32■■■□□ 2.92
CCDC85C-204ENST00000555822 MYO15BQ96JP2 1530 aa33.1■■■□□ 2.89
CCDC85C-204ENST00000555822 CC2D2AQ9P2K1 1620 aa32.67■■■□□ 2.82
CCDC85C-204ENST00000555822 CECR2Q9BXF3 1484 aa32.66■■■□□ 2.82
CCDC85C-204ENST00000555822 ZCCHC6Q5VYS8 1495 aaKnown RBP32.65■■■□□ 2.82
CCDC85C-204ENST00000555822 SHROOM4Q9ULL8 1493 aa32.56■■■□□ 2.8
CCDC85C-204ENST00000555822 DCAF1Q9Y4B6 1507 aa32.49■■■□□ 2.79
CCDC85C-204ENST00000555822 SCRIBQ14160 1630 aa32.46■■■□□ 2.79
CCDC85C-204ENST00000555822 EIF4G1Q04637 1599 aaKnown RBP32.45■■■□□ 2.79
CCDC85C-204ENST00000555822 DNAJC5Q9H3Z4 198 aa32.07■■■□□ 2.72
CCDC85C-204ENST00000555822 CUX2O14529 1486 aa31.33■■■□□ 2.61
CCDC85C-204ENST00000555822 NCAPD3P42695 1498 aa31.25■■■□□ 2.59
CCDC85C-204ENST00000555822 ERCC6Q03468 1493 aa31.2■■■□□ 2.58
CCDC85C-204ENST00000555822 ATAD2BQ9ULI0 1458 aa31.1■■■□□ 2.57
CCDC85C-204ENST00000555822 NESP48681 1621 aa31.04■■■□□ 2.56
CCDC85C-204ENST00000555822 HMGXB3Q12766 1538 aa30.89■■■□□ 2.54
CCDC85C-204ENST00000555822 SMARCA4P51532 1647 aa30.89■■■□□ 2.54
CCDC85C-204ENST00000555822 SMARCA2P51531 1590 aa30.86■■■□□ 2.53
CCDC85C-204ENST00000555822 THOC2Q8NI27 1593 aaKnown RBP30.74■■■□□ 2.51
CCDC85C-204ENST00000555822 BAZ1BQ9UIG0 1483 aaKnown RBP30.69■■■□□ 2.5
CCDC85C-204ENST00000555822 BAZ1AQ9NRL2 1556 aaPredicted RBP30.58■■■□□ 2.49
CCDC85C-204ENST00000555822 PEG3Q9GZU2 1588 aa30.58■■■□□ 2.49
CCDC85C-204ENST00000555822 LAMC3Q9Y6N6 1575 aa30.54■■■□□ 2.48
CCDC85C-204ENST00000555822 KIF21AQ7Z4S6 1674 aa30.52■■■□□ 2.48
CCDC85C-204ENST00000555822 MROH2BQ7Z745 1585 aa30.48■■■□□ 2.47
CCDC85C-204ENST00000555822 TRIM41Q8WV44 630 aa30.42■■■□□ 2.46
CCDC85C-204ENST00000555822 PDS5BQ9NTI5 1447 aa30.38■■■□□ 2.45
CCDC85C-204ENST00000555822 CADPSQ9ULU8 1353 aa30.27■■■□□ 2.44
CCDC85C-204ENST00000555822 MRC2Q9UBG0 1479 aa30.2■■■□□ 2.43
CCDC85C-204ENST00000555822 WDR62O43379 1518 aa30.17■■■□□ 2.42
CCDC85C-204ENST00000555822 WIZO95785 1651 aa30.06■■■□□ 2.4
CCDC85C-204ENST00000555822 CEP164Q9UPV0 1460 aa29.94■■■□□ 2.38
CCDC85C-204ENST00000555822 FANCD2Q9BXW9 1451 aa29.92■■■□□ 2.38
CCDC85C-204ENST00000555822 OSCARQ8IYS5 282 aa29.85■■■□□ 2.37
CCDC85C-204ENST00000555822 CFTRP13569 1480 aa29.81■■■□□ 2.36
CCDC85C-204ENST00000555822 RSF1Q96T23 1441 aaPredicted RBP29.79■■■□□ 2.36
CCDC85C-204ENST00000555822 URB2Q14146 1524 aaKnown RBP29.77■■■□□ 2.36
CCDC85C-204ENST00000555822 TOP2AP11388 1531 aaKnown RBP29.59■■■□□ 2.33
CCDC85C-204ENST00000555822 RIMBP3CA6NJZ7 1639 aa29.57■■■□□ 2.32
CCDC85C-204ENST00000555822 RIMBP3BA6NNM3 1639 aa29.57■■■□□ 2.32
CCDC85C-204ENST00000555822 RIMBP3Q9UFD9 1639 aa29.57■■■□□ 2.32
CCDC85C-204ENST00000555822 ZNF608Q9ULD9 1512 aaPredicted RBP29.53■■■□□ 2.32
CCDC85C-204ENST00000555822 ARHGEF11O15085 1522 aa29.41■■■□□ 2.3
CCDC85C-204ENST00000555822 IFT140Q96RY7 1462 aa29.38■■■□□ 2.29
CCDC85C-204ENST00000555822 PRDM2Q13029 1718 aa29.35■■■□□ 2.29
CCDC85C-204ENST00000555822 TOPBP1Q92547 1522 aa29.31■■■□□ 2.28
CCDC85C-204ENST00000555822 CCDC88BA6NC98 1476 aa29.31■■■□□ 2.28
CCDC85C-204ENST00000555822 CYB5RLQ6IPT4 315 aa29.26■■■□□ 2.27
CCDC85C-204ENST00000555822 EIF4G3O43432 1585 aaKnown RBP29.22■■■□□ 2.27
CCDC85C-204ENST00000555822 AQRO60306 1485 aaKnown RBP eCLIP29.17■■■□□ 2.267e-6■■□□□ 13.1
CCDC85C-204ENST00000555822 ARAP1Q96P48 1450 aa29.14■■■□□ 2.26
CCDC85C-204ENST00000555822 CHD1O14646 1710 aa29.12■■■□□ 2.25
CCDC85C-204ENST00000555822 TARBP1Q13395 1621 aaKnown RBP29.1■■■□□ 2.25
CCDC85C-204ENST00000555822 DNMBPQ6XZF7 1577 aa29.09■■■□□ 2.25
CCDC85C-204ENST00000555822 ABCC8Q09428 1581 aa29.06■■■□□ 2.24
CCDC85C-204ENST00000555822 TRHP20396 242 aaPredicted RBP29.03■■■□□ 2.24
CCDC85C-204ENST00000555822 FBLN2P98095 1184 aa29■■■□□ 2.23
CCDC85C-204ENST00000555822 POLA1P09884 1462 aaPredicted RBP28.98■■■□□ 2.23
CCDC85C-204ENST00000555822 RAD54L2Q9Y4B4 1467 aa28.95■■■□□ 2.22
CCDC85C-204ENST00000555822 TDRD9Q8NDG6 1382 aaKnown RBP28.89■■■□□ 2.22
CCDC85C-204ENST00000555822 SUPT5HO00267 1087 aaKnown RBP28.88■■■□□ 2.21
CCDC85C-204ENST00000555822 SOGA1O94964 1423 aa28.81■■■□□ 2.2
CCDC85C-204ENST00000555822 CLASP1Q7Z460 1538 aa28.8■■■□□ 2.2
CCDC85C-204ENST00000555822 SNAPC4Q5SXM2 1469 aa28.8■■■□□ 2.2
CCDC85C-204ENST00000555822 FGD5Q6ZNL6 1462 aa28.71■■■□□ 2.19
CCDC85C-204ENST00000555822 CHMP7Q8WUX9 453 aaPredicted RBP28.67■■■□□ 2.18
CCDC85C-204ENST00000555822 CUX1P39880 1505 aa28.64■■■□□ 2.18
CCDC85C-204ENST00000555822 SYNJ1O43426 1573 aa28.62■■■□□ 2.17
CCDC85C-204ENST00000555822 MAGI1Q96QZ7 1491 aaPredicted RBP28.62■■■□□ 2.17
CCDC85C-204ENST00000555822 WDR97A6NE52 1622 aa28.59■■■□□ 2.17
CCDC85C-204ENST00000555822 GRIN2BQ13224 1484 aa28.59■■■□□ 2.17
CCDC85C-204ENST00000555822 SYNJ2O15056 1496 aa28.56■■■□□ 2.16
CCDC85C-204ENST00000555822 AEBP2Q6ZN18 517 aaPredicted RBP28.51■■■□□ 2.15
CCDC85C-204ENST00000555822 GAPVD1Q14C86 1478 aa28.51■■■□□ 2.15
CCDC85C-204ENST00000555822 PBRM1Q86U86 1689 aa28.43■■■□□ 2.14
CCDC85C-204ENST00000555822 ERCC6L2Q5T890 1561 aa28.43■■■□□ 2.14
CCDC85C-204ENST00000555822 ABCA5Q8WWZ7 1642 aa28.35■■■□□ 2.13
CCDC85C-204ENST00000555822 ABCA10Q8WWZ4 1543 aa28.33■■■□□ 2.13
CCDC85C-204ENST00000555822 GRIN2AQ12879 1464 aa28.24■■■□□ 2.11
CCDC85C-204ENST00000555822 CEP170Q5SW79 1584 aa28.23■■■□□ 2.11
CCDC85C-204ENST00000555822 NUP160Q12769 1436 aa28.21■■■□□ 2.11
CCDC85C-204ENST00000555822 ADAMTS12P58397 1594 aa28.16■■■□□ 2.1
CCDC85C-204ENST00000555822 WRNQ14191 1432 aaPredicted RBP eCLIP28.12■■■□□ 2.09
CCDC85C-204ENST00000555822 SHROOM2Q13796 1616 aa28.12■■■□□ 2.09
CCDC85C-204ENST00000555822 BIVM-ERCC5R4GMW8 1640 aa28.09■■■□□ 2.09
CCDC85C-204ENST00000555822 TOP2BQ02880 1626 aa28.08■■■□□ 2.09
CCDC85C-204ENST00000555822 KIF13AQ9H1H9 1805 aa28.08■■■□□ 2.09
CCDC85C-204ENST00000555822 FHAD1B1AJZ9 1412 aa28.04■■■□□ 2.08
CCDC85C-204ENST00000555822 PRG4Q92954 1404 aaPredicted RBP27.96■■■□□ 2.07
CCDC85C-204ENST00000555822 JPH4Q96JJ6 628 aa27.92■■■□□ 2.06
CCDC85C-204ENST00000555822 ERICH3Q5RHP9 1530 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms