RNA–Protein interactions for RNA: ENST00000555763.1

NEK9-207, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-207ENST00000555763 AEBP2Q6ZN18 517 aaPredicted RBP17.9■□□□□ 0.46
NEK9-207ENST00000555763 CHIC1Q5VXU3 224 aa16.51■□□□□ 0.23
NEK9-207ENST00000555763 NISCHQ9Y2I1 1504 aa15.38■□□□□ 0.05
NEK9-207ENST00000555763 SENP3Q9H4L4 574 aaPredicted RBP15.2■□□□□ 0.02
NEK9-207ENST00000555763 PHF23Q9BUL5 403 aaPredicted RBP15□□□□□ -0.01
NEK9-207ENST00000555763 ABCC9O60706 1549 aa14.89□□□□□ -0.03
NEK9-207ENST00000555763 POTEDQ86YR6 584 aa14.61□□□□□ -0.07
NEK9-207ENST00000555763 DNAJC5BQ9UF47 199 aa14.61□□□□□ -0.07
NEK9-207ENST00000555763 FOXD1Q16676 465 aa14.38□□□□□ -0.11
NEK9-207ENST00000555763 CCDC180Q9P1Z9 1646 aa14.37□□□□□ -0.11
NEK9-207ENST00000555763 DNAJC5Q9H3Z4 198 aa14.02□□□□□ -0.17
NEK9-207ENST00000555763 RB1CC1Q8TDY2 1594 aa13.93□□□□□ -0.18
NEK9-207ENST00000555763 UNC13AQ9UPW8 1703 aa13.86□□□□□ -0.19
NEK9-207ENST00000555763 NACADO15069 1562 aa13.63□□□□□ -0.23
NEK9-207ENST00000555763 BICRAQ9NZM4 1560 aa13.61□□□□□ -0.23
NEK9-207ENST00000555763 PABPN1Q86U42 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
NEK9-207ENST00000555763 MSH5O43196 834 aa13.57□□□□□ -0.24
NEK9-207ENST00000555763 CC2D2AQ9P2K1 1620 aa13.53□□□□□ -0.24
NEK9-207ENST00000555763 CECR2Q9BXF3 1484 aa13.51□□□□□ -0.25
NEK9-207ENST00000555763 SHROOM4Q9ULL8 1493 aa13.33□□□□□ -0.28
NEK9-207ENST00000555763 EIF4G1Q04637 1599 aaKnown RBP13.3□□□□□ -0.28
NEK9-207ENST00000555763 CUX2O14529 1486 aa13.25□□□□□ -0.29
NEK9-207ENST00000555763 PIAS4Q8N2W9 510 aaPredicted RBP13.22□□□□□ -0.29
NEK9-207ENST00000555763 MYO15BQ96JP2 1530 aa13.2□□□□□ -0.3
NEK9-207ENST00000555763 DCAF8L2P0C7V8 631 aa12.98□□□□□ -0.33
NEK9-207ENST00000555763 TRIM41Q8WV44 630 aa12.98□□□□□ -0.33
NEK9-207ENST00000555763 PPP6R1Q9UPN7 881 aa12.98□□□□□ -0.33
NEK9-207ENST00000555763 ERCC6Q03468 1493 aa12.89□□□□□ -0.35
NEK9-207ENST00000555763 SCRIBQ14160 1630 aa12.88□□□□□ -0.35
NEK9-207ENST00000555763 ADRA2BP18089 450 aa12.88□□□□□ -0.35
NEK9-207ENST00000555763 THOC2Q8NI27 1593 aaKnown RBP12.8□□□□□ -0.36
NEK9-207ENST00000555763 DCAF1Q9Y4B6 1507 aa12.72□□□□□ -0.37
NEK9-207ENST00000555763 ZCCHC6Q5VYS8 1495 aaKnown RBP12.61□□□□□ -0.39
NEK9-207ENST00000555763 KIF21AQ7Z4S6 1674 aa12.6□□□□□ -0.39
NEK9-207ENST00000555763 PLPPR3Q6T4P5 718 aa12.59□□□□□ -0.39
NEK9-207ENST00000555763 BAZ1AQ9NRL2 1556 aaPredicted RBP12.59□□□□□ -0.39
NEK9-207ENST00000555763 NESP48681 1621 aa12.59□□□□□ -0.39
NEK9-207ENST00000555763 SMARCA2P51531 1590 aa12.52□□□□□ -0.4
NEK9-207ENST00000555763 NCAPD3P42695 1498 aa12.52□□□□□ -0.41
NEK9-207ENST00000555763 RIMBP3CA6NJZ7 1639 aa12.5□□□□□ -0.41
NEK9-207ENST00000555763 RIMBP3BA6NNM3 1639 aa12.5□□□□□ -0.41
NEK9-207ENST00000555763 RIMBP3Q9UFD9 1639 aa12.5□□□□□ -0.41
NEK9-207ENST00000555763 LAMC3Q9Y6N6 1575 aa12.47□□□□□ -0.41
NEK9-207ENST00000555763 HMGXB3Q12766 1538 aa12.47□□□□□ -0.41
NEK9-207ENST00000555763 WDR62O43379 1518 aa12.37□□□□□ -0.43
NEK9-207ENST00000555763 ATAD2BQ9ULI0 1458 aa12.36□□□□□ -0.43
NEK9-207ENST00000555763 ARHGEF11O15085 1522 aa12.32□□□□□ -0.44
NEK9-207ENST00000555763 OSCARQ8IYS5 282 aa12.29□□□□□ -0.44
NEK9-207ENST00000555763 MRC2Q9UBG0 1479 aa12.28□□□□□ -0.44
NEK9-207ENST00000555763 PDS5BQ9NTI5 1447 aa12.27□□□□□ -0.45
NEK9-207ENST00000555763 SMARCA4P51532 1647 aa12.26□□□□□ -0.45
NEK9-207ENST00000555763 BAZ1BQ9UIG0 1483 aaKnown RBP12.2□□□□□ -0.46
NEK9-207ENST00000555763 CACNB1Q02641 598 aaPredicted RBP12.19□□□□□ -0.46
NEK9-207ENST00000555763 PEG3Q9GZU2 1588 aa12.18□□□□□ -0.46
NEK9-207ENST00000555763 TRHP20396 242 aaPredicted RBP12.14□□□□□ -0.47
NEK9-207ENST00000555763 ARAP1Q96P48 1450 aa12.12□□□□□ -0.47
NEK9-207ENST00000555763 ILDR1Q86SU0 546 aaPredicted RBP12.1□□□□□ -0.47
NEK9-207ENST00000555763 MAPK8IP2Q13387 824 aaPredicted RBP12.09□□□□□ -0.47
NEK9-207ENST00000555763 CHD1O14646 1710 aa12.06□□□□□ -0.48
NEK9-207ENST00000555763 CEP164Q9UPV0 1460 aa12.06□□□□□ -0.48
NEK9-207ENST00000555763 CYB5RLQ6IPT4 315 aa12.04□□□□□ -0.48
NEK9-207ENST00000555763 CADPSQ9ULU8 1353 aa12.03□□□□□ -0.48
NEK9-207ENST00000555763 EHMT2Q96KQ7 1210 aa12.02□□□□□ -0.49
NEK9-207ENST00000555763 DMRT2Q9Y5R5 561 aa11.97□□□□□ -0.49
NEK9-207ENST00000555763 RSF1Q96T23 1441 aaPredicted RBP11.95□□□□□ -0.5
NEK9-207ENST00000555763 FANCD2Q9BXW9 1451 aa11.95□□□□□ -0.5
NEK9-207ENST00000555763 URB2Q14146 1524 aaKnown RBP11.94□□□□□ -0.5
NEK9-207ENST00000555763 PRDM2Q13029 1718 aa11.94□□□□□ -0.5
NEK9-207ENST00000555763 EIF4G3O43432 1585 aaKnown RBP11.93□□□□□ -0.5
NEK9-207ENST00000555763 ZNF608Q9ULD9 1512 aaPredicted RBP11.9□□□□□ -0.5
NEK9-207ENST00000555763 KCNA4P22459 653 aa11.86□□□□□ -0.51
NEK9-207ENST00000555763 KIF13AQ9H1H9 1805 aa11.85□□□□□ -0.51
NEK9-207ENST00000555763 IFT140Q96RY7 1462 aa11.83□□□□□ -0.52
NEK9-207ENST00000555763 MROH2BQ7Z745 1585 aa11.83□□□□□ -0.52
NEK9-207ENST00000555763 CLASP1Q7Z460 1538 aa11.82□□□□□ -0.52
NEK9-207ENST00000555763 CFTRP13569 1480 aa11.79□□□□□ -0.52
NEK9-207ENST00000555763 TARBP1Q13395 1621 aaKnown RBP11.73□□□□□ -0.53
NEK9-207ENST00000555763 ERCC6L2Q5T890 1561 aa11.73□□□□□ -0.53
NEK9-207ENST00000555763 WIZO95785 1651 aa11.71□□□□□ -0.53
NEK9-207ENST00000555763 SYNJ1O43426 1573 aa11.69□□□□□ -0.54
NEK9-207ENST00000555763 TOPBP1Q92547 1522 aa11.67□□□□□ -0.54
NEK9-207ENST00000555763 HECW2Q9P2P5 1572 aa11.64□□□□□ -0.55
NEK9-207ENST00000555763 KDM4FA0A1W2PPD8 638 aa11.64□□□□□ -0.55
NEK9-207ENST00000555763 GAPVD1Q14C86 1478 aa11.63□□□□□ -0.55
NEK9-207ENST00000555763 AQRO60306 1485 aaKnown RBP eCLIP11.63□□□□□ -0.55
NEK9-207ENST00000555763 DCAF8L1A6NGE4 600 aa11.61□□□□□ -0.55
NEK9-207ENST00000555763 DNMBPQ6XZF7 1577 aa11.61□□□□□ -0.55
NEK9-207ENST00000555763 RNF39Q9H2S5 420 aa11.6□□□□□ -0.55
NEK9-207ENST00000555763 WDR97A6NE52 1622 aa11.58□□□□□ -0.56
NEK9-207ENST00000555763 KDM6BO15054 1643 aa11.58□□□□□ -0.56
NEK9-207ENST00000555763 FBLN2P98095 1184 aa11.56□□□□□ -0.56
NEK9-207ENST00000555763 ABCC8Q09428 1581 aa11.56□□□□□ -0.56
NEK9-207ENST00000555763 SNAPC4Q5SXM2 1469 aa11.55□□□□□ -0.56
NEK9-207ENST00000555763 SCAF1Q9H7N4 1312 aaKnown RBP11.55□□□□□ -0.56
NEK9-207ENST00000555763 LMTK3Q96Q04 1460 aa11.52□□□□□ -0.56
NEK9-207ENST00000555763 MAGI1Q96QZ7 1491 aaPredicted RBP11.51□□□□□ -0.57
NEK9-207ENST00000555763 FBXO41Q8TF61 875 aa11.51□□□□□ -0.57
NEK9-207ENST00000555763 PBRM1Q86U86 1689 aa11.5□□□□□ -0.57
NEK9-207ENST00000555763 CSRNP3Q8WYN3 585 aa11.5□□□□□ -0.57
NEK9-207ENST00000555763 TSPOAP1O95153 1857 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms