RNA–Protein interactions for RNA: ENST00000555576.5

TUBB3-208, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-208ENST00000555576 NISCHQ9Y2I1 1504 aa33.74■■■□□ 2.99
TUBB3-208ENST00000555576 CCDC180Q9P1Z9 1646 aa30.34■■■□□ 2.45
TUBB3-208ENST00000555576 ABCC9O60706 1549 aa30.33■■■□□ 2.45
TUBB3-208ENST00000555576 RB1CC1Q8TDY2 1594 aa28.86■■■□□ 2.21
TUBB3-208ENST00000555576 NACADO15069 1562 aa28.67■■■□□ 2.18
TUBB3-208ENST00000555576 DNAJC5BQ9UF47 199 aa28.55■■■□□ 2.16
TUBB3-208ENST00000555576 MYO15BQ96JP2 1530 aa28.31■■■□□ 2.12
TUBB3-208ENST00000555576 UNC13AQ9UPW8 1703 aa28.29■■■□□ 2.12
TUBB3-208ENST00000555576 DCAF8L2P0C7V8 631 aa28.27■■■□□ 2.12
TUBB3-208ENST00000555576 PABPN1Q86U42 306 aaKnown RBP eCLIP28.18■■■□□ 2.1
TUBB3-208ENST00000555576 BICRAQ9NZM4 1560 aa28.11■■■□□ 2.09
TUBB3-208ENST00000555576 ZCCHC6Q5VYS8 1495 aaKnown RBP27.99■■■□□ 2.07
TUBB3-208ENST00000555576 DCAF1Q9Y4B6 1507 aa27.91■■■□□ 2.06
TUBB3-208ENST00000555576 SHROOM4Q9ULL8 1493 aa27.71■■■□□ 2.03
TUBB3-208ENST00000555576 SCRIBQ14160 1630 aa27.59■■■□□ 2.01
TUBB3-208ENST00000555576 CC2D2AQ9P2K1 1620 aa27.45■■□□□ 1.98
TUBB3-208ENST00000555576 EIF4G1Q04637 1599 aaKnown RBP27.39■■□□□ 1.97
TUBB3-208ENST00000555576 CECR2Q9BXF3 1484 aa27.34■■□□□ 1.97
TUBB3-208ENST00000555576 NCAPD3P42695 1498 aa26.48■■□□□ 1.83
TUBB3-208ENST00000555576 ATAD2BQ9ULI0 1458 aa26.38■■□□□ 1.81
TUBB3-208ENST00000555576 SMARCA4P51532 1647 aa26.35■■□□□ 1.81
TUBB3-208ENST00000555576 HMGXB3Q12766 1538 aa26.29■■□□□ 1.8
TUBB3-208ENST00000555576 SMARCA2P51531 1590 aa26.29■■□□□ 1.8
TUBB3-208ENST00000555576 DNAJC5Q9H3Z4 198 aa26.23■■□□□ 1.79
TUBB3-208ENST00000555576 CUX2O14529 1486 aa26.22■■□□□ 1.79
TUBB3-208ENST00000555576 BAZ1AQ9NRL2 1556 aaPredicted RBP26.18■■□□□ 1.78
TUBB3-208ENST00000555576 ERCC6Q03468 1493 aa26.16■■□□□ 1.78
TUBB3-208ENST00000555576 PEG3Q9GZU2 1588 aa26.15■■□□□ 1.78
TUBB3-208ENST00000555576 BAZ1BQ9UIG0 1483 aaKnown RBP26.08■■□□□ 1.77
TUBB3-208ENST00000555576 NESP48681 1621 aa26.07■■□□□ 1.76
TUBB3-208ENST00000555576 MROH2BQ7Z745 1585 aa26■■□□□ 1.75
TUBB3-208ENST00000555576 THOC2Q8NI27 1593 aaKnown RBP25.89■■□□□ 1.73
TUBB3-208ENST00000555576 LAMC3Q9Y6N6 1575 aa25.88■■□□□ 1.73
TUBB3-208ENST00000555576 KIF21AQ7Z4S6 1674 aa25.75■■□□□ 1.71
TUBB3-208ENST00000555576 PDS5BQ9NTI5 1447 aa25.68■■□□□ 1.7
TUBB3-208ENST00000555576 WIZO95785 1651 aa25.68■■□□□ 1.7
TUBB3-208ENST00000555576 CADPSQ9ULU8 1353 aa25.62■■□□□ 1.69
TUBB3-208ENST00000555576 MRC2Q9UBG0 1479 aa25.51■■□□□ 1.67
TUBB3-208ENST00000555576 WDR62O43379 1518 aa25.5■■□□□ 1.67
TUBB3-208ENST00000555576 RSF1Q96T23 1441 aaPredicted RBP25.42■■□□□ 1.66
TUBB3-208ENST00000555576 CFTRP13569 1480 aa25.37■■□□□ 1.65
TUBB3-208ENST00000555576 CEP164Q9UPV0 1460 aa25.37■■□□□ 1.65
TUBB3-208ENST00000555576 TOP2AP11388 1531 aaKnown RBP25.36■■□□□ 1.65
TUBB3-208ENST00000555576 FANCD2Q9BXW9 1451 aa25.34■■□□□ 1.65
TUBB3-208ENST00000555576 URB2Q14146 1524 aaKnown RBP25.18■■□□□ 1.62
TUBB3-208ENST00000555576 PRDM2Q13029 1718 aa25.12■■□□□ 1.61
TUBB3-208ENST00000555576 CCDC88BA6NC98 1476 aa25.04■■□□□ 1.6
TUBB3-208ENST00000555576 TRIM41Q8WV44 630 aa24.95■■□□□ 1.58
TUBB3-208ENST00000555576 OSCARQ8IYS5 282 aa24.89■■□□□ 1.58
TUBB3-208ENST00000555576 IFT140Q96RY7 1462 aa24.88■■□□□ 1.57
TUBB3-208ENST00000555576 TOPBP1Q92547 1522 aa24.87■■□□□ 1.57
TUBB3-208ENST00000555576 ZNF608Q9ULD9 1512 aaPredicted RBP24.87■■□□□ 1.57
TUBB3-208ENST00000555576 DNMBPQ6XZF7 1577 aa24.79■■□□□ 1.56
TUBB3-208ENST00000555576 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
TUBB3-208ENST00000555576 EIF4G3O43432 1585 aaKnown RBP24.76■■□□□ 1.55
TUBB3-208ENST00000555576 TARBP1Q13395 1621 aaKnown RBP24.71■■□□□ 1.55
TUBB3-208ENST00000555576 RIMBP3CA6NJZ7 1639 aa24.69■■□□□ 1.54
TUBB3-208ENST00000555576 RIMBP3BA6NNM3 1639 aa24.69■■□□□ 1.54
TUBB3-208ENST00000555576 RIMBP3Q9UFD9 1639 aa24.69■■□□□ 1.54
TUBB3-208ENST00000555576 POLA1P09884 1462 aaPredicted RBP24.63■■□□□ 1.53
TUBB3-208ENST00000555576 ARHGEF11O15085 1522 aa24.61■■□□□ 1.53
TUBB3-208ENST00000555576 AQRO60306 1485 aaKnown RBP eCLIP24.59■■□□□ 1.53
TUBB3-208ENST00000555576 CHD1O14646 1710 aa24.56■■□□□ 1.52
TUBB3-208ENST00000555576 RAD54L2Q9Y4B4 1467 aa24.51■■□□□ 1.51
TUBB3-208ENST00000555576 FGD5Q6ZNL6 1462 aa24.45■■□□□ 1.5
TUBB3-208ENST00000555576 SOGA1O94964 1423 aa24.44■■□□□ 1.5
TUBB3-208ENST00000555576 WDR97A6NE52 1622 aa24.44■■□□□ 1.5
TUBB3-208ENST00000555576 CUX1P39880 1505 aa24.44■■□□□ 1.5
TUBB3-208ENST00000555576 TDRD9Q8NDG6 1382 aaKnown RBP24.41■■□□□ 1.5
TUBB3-208ENST00000555576 ARAP1Q96P48 1450 aa24.38■■□□□ 1.49
TUBB3-208ENST00000555576 SNAPC4Q5SXM2 1469 aa24.37■■□□□ 1.49
TUBB3-208ENST00000555576 CLASP1Q7Z460 1538 aa24.32■■□□□ 1.48
TUBB3-208ENST00000555576 FBLN2P98095 1184 aa24.31■■□□□ 1.48
TUBB3-208ENST00000555576 MAGI1Q96QZ7 1491 aaPredicted RBP24.31■■□□□ 1.48
TUBB3-208ENST00000555576 CYB5RLQ6IPT4 315 aa24.3■■□□□ 1.48
TUBB3-208ENST00000555576 GRIN2BQ13224 1484 aa24.27■■□□□ 1.48
TUBB3-208ENST00000555576 SYNJ1O43426 1573 aa24.23■■□□□ 1.47
TUBB3-208ENST00000555576 SYNJ2O15056 1496 aa24.22■■□□□ 1.47
TUBB3-208ENST00000555576 PBRM1Q86U86 1689 aa24.21■■□□□ 1.47
TUBB3-208ENST00000555576 ABCA5Q8WWZ7 1642 aa24.19■■□□□ 1.46
TUBB3-208ENST00000555576 ABCA10Q8WWZ4 1543 aa24.18■■□□□ 1.46
TUBB3-208ENST00000555576 GAPVD1Q14C86 1478 aa24.17■■□□□ 1.46
TUBB3-208ENST00000555576 CHMP7Q8WUX9 453 aaPredicted RBP24.16■■□□□ 1.46
TUBB3-208ENST00000555576 SUPT5HO00267 1087 aaKnown RBP24.06■■□□□ 1.44
TUBB3-208ENST00000555576 BIVM-ERCC5R4GMW8 1640 aa24.04■■□□□ 1.44
TUBB3-208ENST00000555576 TOP2BQ02880 1626 aa24.02■■□□□ 1.44
TUBB3-208ENST00000555576 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.43
TUBB3-208ENST00000555576 ADAMTS12P58397 1594 aa24■■□□□ 1.43
TUBB3-208ENST00000555576 TRHP20396 242 aaPredicted RBP24■■□□□ 1.43
TUBB3-208ENST00000555576 GRIN2AQ12879 1464 aa23.99■■□□□ 1.43
TUBB3-208ENST00000555576 CEP170Q5SW79 1584 aa23.94■■□□□ 1.42
TUBB3-208ENST00000555576 NUP160Q12769 1436 aa23.93■■□□□ 1.42
TUBB3-208ENST00000555576 ERCC6L2Q5T890 1561 aa23.92■■□□□ 1.42
TUBB3-208ENST00000555576 ERICH3Q5RHP9 1530 aa23.87■■□□□ 1.41
TUBB3-208ENST00000555576 SHROOM2Q13796 1616 aa23.87■■□□□ 1.41
TUBB3-208ENST00000555576 FHAD1B1AJZ9 1412 aa23.86■■□□□ 1.41
TUBB3-208ENST00000555576 RUSC2Q8N2Y8 1516 aa23.68■■□□□ 1.38
TUBB3-208ENST00000555576 PRG4Q92954 1404 aaPredicted RBP23.63■■□□□ 1.37
TUBB3-208ENST00000555576 JPH4Q96JJ6 628 aa23.57■■□□□ 1.36
TUBB3-208ENST00000555576 KIF13AQ9H1H9 1805 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms