RNA–Protein interactions for RNA: ENST00000555498.5

KTN1-221, Transcript of kinectin 1, humanhuman

APPRIS ALT2 TSL 3

Gene KTN1, Length 595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-221ENST00000555498 NISCHQ9Y2I1 1504 aa50.03■■■■■ 5.6
KTN1-221ENST00000555498 CCDC180Q9P1Z9 1646 aa44.91■■■■■ 4.78
KTN1-221ENST00000555498 ABCC9O60706 1549 aa44.8■■■■■ 4.76
KTN1-221ENST00000555498 RB1CC1Q8TDY2 1594 aa42.73■■■■■ 4.43
KTN1-221ENST00000555498 NACADO15069 1562 aa42.46■■■■■ 4.39
KTN1-221ENST00000555498 DCAF8L2P0C7V8 631 aa42.24■■■■■ 4.35
KTN1-221ENST00000555498 DNAJC5BQ9UF47 199 aa41.96■■■■■ 4.31
KTN1-221ENST00000555498 MYO15BQ96JP2 1530 aa41.91■■■■■ 4.3
KTN1-221ENST00000555498 PABPN1Q86U42 306 aaKnown RBP eCLIP41.72■■■■■ 4.27
KTN1-221ENST00000555498 UNC13AQ9UPW8 1703 aa41.71■■■■■ 4.27
KTN1-221ENST00000555498 ZCCHC6Q5VYS8 1495 aaKnown RBP41.45■■■■■ 4.23
KTN1-221ENST00000555498 BICRAQ9NZM4 1560 aa41.42■■■■■ 4.22
KTN1-221ENST00000555498 DCAF1Q9Y4B6 1507 aa41.38■■■■■ 4.21
KTN1-221ENST00000555498 SHROOM4Q9ULL8 1493 aa40.97■■■■■ 4.15
KTN1-221ENST00000555498 SCRIBQ14160 1630 aa40.85■■■■■ 4.13
KTN1-221ENST00000555498 CC2D2AQ9P2K1 1620 aa40.49■■■■■ 4.07
KTN1-221ENST00000555498 EIF4G1Q04637 1599 aaKnown RBP40.43■■■■■ 4.06
KTN1-221ENST00000555498 CECR2Q9BXF3 1484 aa40.39■■■■■ 4.06
KTN1-221ENST00000555498 NCAPD3P42695 1498 aa39.18■■■■□ 3.86
KTN1-221ENST00000555498 ATAD2BQ9ULI0 1458 aa39.05■■■■□ 3.84
KTN1-221ENST00000555498 SMARCA4P51532 1647 aa39.01■■■■□ 3.84
KTN1-221ENST00000555498 SMARCA2P51531 1590 aa38.98■■■■□ 3.83
KTN1-221ENST00000555498 HMGXB3Q12766 1538 aa38.89■■■■□ 3.82
KTN1-221ENST00000555498 BAZ1AQ9NRL2 1556 aaPredicted RBP38.87■■■■□ 3.81
KTN1-221ENST00000555498 ERCC6Q03468 1493 aa38.73■■■■□ 3.79
KTN1-221ENST00000555498 BAZ1BQ9UIG0 1483 aaKnown RBP38.68■■■■□ 3.78
KTN1-221ENST00000555498 CUX2O14529 1486 aa38.66■■■■□ 3.78
KTN1-221ENST00000555498 PEG3Q9GZU2 1588 aa38.65■■■■□ 3.78
KTN1-221ENST00000555498 DNAJC5Q9H3Z4 198 aa38.6■■■■□ 3.77
KTN1-221ENST00000555498 MROH2BQ7Z745 1585 aa38.52■■■■□ 3.76
KTN1-221ENST00000555498 NESP48681 1621 aa38.48■■■■□ 3.75
KTN1-221ENST00000555498 LAMC3Q9Y6N6 1575 aa38.31■■■■□ 3.72
KTN1-221ENST00000555498 PDS5BQ9NTI5 1447 aa38.11■■■■□ 3.69
KTN1-221ENST00000555498 THOC2Q8NI27 1593 aaKnown RBP38.1■■■■□ 3.69
KTN1-221ENST00000555498 WIZO95785 1651 aa38.05■■■■□ 3.68
KTN1-221ENST00000555498 KIF21AQ7Z4S6 1674 aa38.01■■■■□ 3.67
KTN1-221ENST00000555498 CADPSQ9ULU8 1353 aa38■■■■□ 3.67
KTN1-221ENST00000555498 RSF1Q96T23 1441 aaPredicted RBP37.76■■■■□ 3.63
KTN1-221ENST00000555498 MRC2Q9UBG0 1479 aa37.72■■■■□ 3.63
KTN1-221ENST00000555498 WDR62O43379 1518 aa37.61■■■■□ 3.61
KTN1-221ENST00000555498 TOP2AP11388 1531 aaKnown RBP37.61■■■■□ 3.61
KTN1-221ENST00000555498 CEP164Q9UPV0 1460 aa37.59■■■■□ 3.61
KTN1-221ENST00000555498 CFTRP13569 1480 aa37.56■■■■□ 3.6
KTN1-221ENST00000555498 FANCD2Q9BXW9 1451 aa37.54■■■■□ 3.6
KTN1-221ENST00000555498 URB2Q14146 1524 aaKnown RBP37.2■■■■□ 3.55
KTN1-221ENST00000555498 PRDM2Q13029 1718 aa37.2■■■■□ 3.55
KTN1-221ENST00000555498 CCDC88BA6NC98 1476 aa37.18■■■■□ 3.54
KTN1-221ENST00000555498 OSCARQ8IYS5 282 aa36.95■■■■□ 3.51
KTN1-221ENST00000555498 TRIM41Q8WV44 630 aa36.88■■■■□ 3.49
KTN1-221ENST00000555498 IFT140Q96RY7 1462 aa36.85■■■■□ 3.49
KTN1-221ENST00000555498 ABCC8Q09428 1581 aa36.85■■■■□ 3.49
KTN1-221ENST00000555498 TOPBP1Q92547 1522 aa36.83■■■■□ 3.49
KTN1-221ENST00000555498 ZNF608Q9ULD9 1512 aaPredicted RBP36.72■■■■□ 3.47
KTN1-221ENST00000555498 DNMBPQ6XZF7 1577 aa36.71■■■■□ 3.47
KTN1-221ENST00000555498 EIF4G3O43432 1585 aaKnown RBP36.54■■■■□ 3.44
KTN1-221ENST00000555498 TARBP1Q13395 1621 aaKnown RBP36.49■■■■□ 3.43
KTN1-221ENST00000555498 POLA1P09884 1462 aaPredicted RBP36.44■■■■□ 3.42
KTN1-221ENST00000555498 AQRO60306 1485 aaKnown RBP eCLIP36.42■■■■□ 3.42
KTN1-221ENST00000555498 RIMBP3CA6NJZ7 1639 aa36.37■■■■□ 3.41
KTN1-221ENST00000555498 RIMBP3BA6NNM3 1639 aa36.37■■■■□ 3.41
KTN1-221ENST00000555498 RIMBP3Q9UFD9 1639 aa36.37■■■■□ 3.41
KTN1-221ENST00000555498 SOGA1O94964 1423 aa36.33■■■■□ 3.41
KTN1-221ENST00000555498 RAD54L2Q9Y4B4 1467 aa36.29■■■■□ 3.4
KTN1-221ENST00000555498 CHD1O14646 1710 aa36.27■■■■□ 3.4
KTN1-221ENST00000555498 ARHGEF11O15085 1522 aa36.27■■■■□ 3.4
KTN1-221ENST00000555498 FGD5Q6ZNL6 1462 aa36.23■■■■□ 3.39
KTN1-221ENST00000555498 FBLN2P98095 1184 aa36.22■■■■□ 3.39
KTN1-221ENST00000555498 TDRD9Q8NDG6 1382 aaKnown RBP36.22■■■■□ 3.39
KTN1-221ENST00000555498 WDR97A6NE52 1622 aa36.19■■■■□ 3.38
KTN1-221ENST00000555498 CUX1P39880 1505 aa36.18■■■■□ 3.38
KTN1-221ENST00000555498 SUPT5HO00267 1087 aaKnown RBP36.13■■■■□ 3.37
KTN1-221ENST00000555498 SNAPC4Q5SXM2 1469 aa36.05■■■■□ 3.36
KTN1-221ENST00000555498 CYB5RLQ6IPT4 315 aa36.03■■■■□ 3.36
KTN1-221ENST00000555498 MAGI1Q96QZ7 1491 aaPredicted RBP36.01■■■■□ 3.36
KTN1-221ENST00000555498 GRIN2BQ13224 1484 aa36■■■■□ 3.35
KTN1-221ENST00000555498 CHMP7Q8WUX9 453 aaPredicted RBP35.99■■■■□ 3.35
KTN1-221ENST00000555498 ARAP1Q96P48 1450 aa35.9■■■■□ 3.34
KTN1-221ENST00000555498 SYNJ1O43426 1573 aa35.89■■■■□ 3.34
KTN1-221ENST00000555498 GAPVD1Q14C86 1478 aa35.88■■■■□ 3.33
KTN1-221ENST00000555498 SYNJ2O15056 1496 aa35.87■■■■□ 3.33
KTN1-221ENST00000555498 CLASP1Q7Z460 1538 aa35.85■■■■□ 3.33
KTN1-221ENST00000555498 ABCA10Q8WWZ4 1543 aa35.84■■■■□ 3.33
KTN1-221ENST00000555498 PBRM1Q86U86 1689 aa35.83■■■■□ 3.33
KTN1-221ENST00000555498 ABCA5Q8WWZ7 1642 aa35.75■■■■□ 3.31
KTN1-221ENST00000555498 WRNQ14191 1432 aaPredicted RBP eCLIP35.74■■■■□ 3.31
KTN1-221ENST00000555498 TOP2BQ02880 1626 aa35.65■■■■□ 3.3
KTN1-221ENST00000555498 BIVM-ERCC5R4GMW8 1640 aa35.65■■■■□ 3.3
KTN1-221ENST00000555498 TRHP20396 242 aaPredicted RBP35.64■■■■□ 3.3
KTN1-221ENST00000555498 GRIN2AQ12879 1464 aa35.52■■■■□ 3.28
KTN1-221ENST00000555498 ADAMTS12P58397 1594 aa35.47■■■■□ 3.27
KTN1-221ENST00000555498 FHAD1B1AJZ9 1412 aa35.44■■■■□ 3.26
KTN1-221ENST00000555498 ERICH3Q5RHP9 1530 aa35.42■■■■□ 3.26
KTN1-221ENST00000555498 NUP160Q12769 1436 aa35.4■■■■□ 3.26
KTN1-221ENST00000555498 CEP170Q5SW79 1584 aa35.35■■■■□ 3.25
KTN1-221ENST00000555498 ERCC6L2Q5T890 1561 aa35.25■■■■□ 3.23
KTN1-221ENST00000555498 SHROOM2Q13796 1616 aa35.23■■■■□ 3.23
KTN1-221ENST00000555498 JPH4Q96JJ6 628 aa35.08■■■■□ 3.21
KTN1-221ENST00000555498 PRG4Q92954 1404 aaPredicted RBP35.06■■■■□ 3.2
KTN1-221ENST00000555498 KIF27Q86VH2 1401 aa34.99■■■■□ 3.19
KTN1-221ENST00000555498 RUSC2Q8N2Y8 1516 aa34.97■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms