RNA–Protein interactions for RNA: ENST00000555404.5

TIMM9-205, Transcript of translocase of inner mitochondrial membrane 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMM9, Length 430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9-205ENST00000555404 AEBP2Q6ZN18 517 aaPredicted RBP22.67■■□□□ 1.22
TIMM9-205ENST00000555404 CHIC1Q5VXU3 224 aa21.04■□□□□ 0.96
TIMM9-205ENST00000555404 POTEDQ86YR6 584 aa19.54■□□□□ 0.72
TIMM9-205ENST00000555404 SENP3Q9H4L4 574 aaPredicted RBP19.45■□□□□ 0.7
TIMM9-205ENST00000555404 PHF23Q9BUL5 403 aaPredicted RBP19.02■□□□□ 0.64
TIMM9-205ENST00000555404 FOXD1Q16676 465 aa18.35■□□□□ 0.53
TIMM9-205ENST00000555404 MSH5O43196 834 aa17.62■□□□□ 0.41
TIMM9-205ENST00000555404 NISCHQ9Y2I1 1504 aa17.01■□□□□ 0.31
TIMM9-205ENST00000555404 PIAS4Q8N2W9 510 aaPredicted RBP16.76■□□□□ 0.27
TIMM9-205ENST00000555404 PPP6R1Q9UPN7 881 aa16.14■□□□□ 0.17
TIMM9-205ENST00000555404 ADRA2BP18089 450 aa15.96■□□□□ 0.15
TIMM9-205ENST00000555404 CACNB1Q02641 598 aaPredicted RBP15.9■□□□□ 0.14
TIMM9-205ENST00000555404 PLPPR3Q6T4P5 718 aa15.46■□□□□ 0.07
TIMM9-205ENST00000555404 DMRT2Q9Y5R5 561 aa15.25■□□□□ 0.03
TIMM9-205ENST00000555404 MAPK8IP2Q13387 824 aaPredicted RBP15.08■□□□□ 0
TIMM9-205ENST00000555404 POTEHQ6S545 545 aa15.01□□□□□ -0.01
TIMM9-205ENST00000555404 RNF39Q9H2S5 420 aa14.97□□□□□ -0.01
TIMM9-205ENST00000555404 CCDC180Q9P1Z9 1646 aa14.92□□□□□ -0.02
TIMM9-205ENST00000555404 C1QBPQ07021 282 aaKnown RBP14.63□□□□□ -0.07
TIMM9-205ENST00000555404 DCAF8L1A6NGE4 600 aa14.56□□□□□ -0.08
TIMM9-205ENST00000555404 SCAF1Q9H7N4 1312 aaKnown RBP14.52□□□□□ -0.08
TIMM9-205ENST00000555404 DCAF8L2P0C7V8 631 aa14.26□□□□□ -0.13
TIMM9-205ENST00000555404 ZCCHC6Q5VYS8 1495 aaKnown RBP14.22□□□□□ -0.13
TIMM9-205ENST00000555404 HOXD11P31277 338 aaPredicted RBP14.19□□□□□ -0.14
TIMM9-205ENST00000555404 ABCC9O60706 1549 aa14.18□□□□□ -0.14
TIMM9-205ENST00000555404 DCAF1Q9Y4B6 1507 aa14.15□□□□□ -0.14
TIMM9-205ENST00000555404 MYO15BQ96JP2 1530 aa14.09□□□□□ -0.15
TIMM9-205ENST00000555404 NACADO15069 1562 aa14.02□□□□□ -0.16
TIMM9-205ENST00000555404 DNAJC5BQ9UF47 199 aa13.97□□□□□ -0.17
TIMM9-205ENST00000555404 RB1CC1Q8TDY2 1594 aa13.92□□□□□ -0.18
TIMM9-205ENST00000555404 SHROOM4Q9ULL8 1493 aa13.71□□□□□ -0.21
TIMM9-205ENST00000555404 RNF216Q9NWF9 866 aaPredicted RBP13.69□□□□□ -0.22
TIMM9-205ENST00000555404 SCRIBQ14160 1630 aa13.6□□□□□ -0.23
TIMM9-205ENST00000555404 DSG3P32926 999 aa13.56□□□□□ -0.24
TIMM9-205ENST00000555404 SP7Q8TDD2 431 aaPredicted RBP13.45□□□□□ -0.26
TIMM9-205ENST00000555404 CNKSR2Q8WXI2 1034 aa13.44□□□□□ -0.26
TIMM9-205ENST00000555404 PPP4R3CPQ6ZMV5 832 aa13.39□□□□□ -0.27
TIMM9-205ENST00000555404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.39□□□□□ -0.273e-7■□□□□ 9.7
TIMM9-205ENST00000555404 PABPN1Q86U42 306 aaKnown RBP eCLIP13.38□□□□□ -0.27
TIMM9-205ENST00000555404 UNC13AQ9UPW8 1703 aa13.32□□□□□ -0.28
TIMM9-205ENST00000555404 SPINK5Q9NQ38 1064 aaPredicted RBP13.27□□□□□ -0.29
TIMM9-205ENST00000555404 BICRAQ9NZM4 1560 aa13.27□□□□□ -0.29
TIMM9-205ENST00000555404 SUPT5HO00267 1087 aaKnown RBP13.26□□□□□ -0.29
TIMM9-205ENST00000555404 CAPN15O75808 1086 aa13.23□□□□□ -0.29
TIMM9-205ENST00000555404 BAZ1AQ9NRL2 1556 aaPredicted RBP13.23□□□□□ -0.29
TIMM9-205ENST00000555404 CHRDL2Q6WN34 429 aa13.18□□□□□ -0.3
TIMM9-205ENST00000555404 RSF1Q96T23 1441 aaPredicted RBP13.13□□□□□ -0.31
TIMM9-205ENST00000555404 CECR2Q9BXF3 1484 aa13.11□□□□□ -0.31
TIMM9-205ENST00000555404 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
TIMM9-205ENST00000555404 SMARCA4P51532 1647 aa13.06□□□□□ -0.32
TIMM9-205ENST00000555404 MROH2BQ7Z745 1585 aa13.04□□□□□ -0.32
TIMM9-205ENST00000555404 SMARCA2P51531 1590 aa13.03□□□□□ -0.32
TIMM9-205ENST00000555404 EIF4G1Q04637 1599 aaKnown RBP12.99□□□□□ -0.33
TIMM9-205ENST00000555404 PEG3Q9GZU2 1588 aa12.95□□□□□ -0.34
TIMM9-205ENST00000555404 ATAD2BQ9ULI0 1458 aa12.93□□□□□ -0.34
TIMM9-205ENST00000555404 NCAPD3P42695 1498 aa12.92□□□□□ -0.34
TIMM9-205ENST00000555404 BAZ1BQ9UIG0 1483 aaKnown RBP12.92□□□□□ -0.34
TIMM9-205ENST00000555404 RBM42Q9BTD8 480 aaKnown RBP12.9□□□□□ -0.34
TIMM9-205ENST00000555404 WIZO95785 1651 aa12.89□□□□□ -0.35
TIMM9-205ENST00000555404 TOP2AP11388 1531 aaKnown RBP12.88□□□□□ -0.35
TIMM9-205ENST00000555404 HMGXB3Q12766 1538 aa12.85□□□□□ -0.35
TIMM9-205ENST00000555404 PLSCR2Q9NRY7 297 aa12.85□□□□□ -0.35
TIMM9-205ENST00000555404 ABCB7O75027 752 aa12.84□□□□□ -0.35
TIMM9-205ENST00000555404 CC2D2AQ9P2K1 1620 aa12.81□□□□□ -0.36
TIMM9-205ENST00000555404 CCDC88BA6NC98 1476 aa12.73□□□□□ -0.37
TIMM9-205ENST00000555404 TRHP20396 242 aaPredicted RBP12.69□□□□□ -0.38
TIMM9-205ENST00000555404 HAX1O00165 279 aa12.66□□□□□ -0.38
TIMM9-205ENST00000555404 ZNF219Q9P2Y4 722 aaPredicted RBP12.65□□□□□ -0.38
TIMM9-205ENST00000555404 CADPSQ9ULU8 1353 aa12.61□□□□□ -0.39
TIMM9-205ENST00000555404 PIP4P2Q8N4L2 257 aa12.6□□□□□ -0.39
TIMM9-205ENST00000555404 TRIM41Q8WV44 630 aa12.6□□□□□ -0.39
TIMM9-205ENST00000555404 LHX8Q68G74 356 aa12.57□□□□□ -0.4
TIMM9-205ENST00000555404 CFTRP13569 1480 aa12.56□□□□□ -0.4
TIMM9-205ENST00000555404 PDS5BQ9NTI5 1447 aa12.53□□□□□ -0.4
TIMM9-205ENST00000555404 EVX2Q03828 476 aa12.52□□□□□ -0.41
TIMM9-205ENST00000555404 LAMC3Q9Y6N6 1575 aa12.51□□□□□ -0.41
TIMM9-205ENST00000555404 WRNQ14191 1432 aaPredicted RBP eCLIP12.45□□□□□ -0.42
TIMM9-205ENST00000555404 ABCC8Q09428 1581 aa12.44□□□□□ -0.42
TIMM9-205ENST00000555404 APLP2Q06481 763 aa12.43□□□□□ -0.42
TIMM9-205ENST00000555404 FANCD2Q9BXW9 1451 aa12.4□□□□□ -0.42
TIMM9-205ENST00000555404 NCBP3Q53F19 620 aaKnown RBP12.39□□□□□ -0.43
TIMM9-205ENST00000555404 CEP164Q9UPV0 1460 aa12.38□□□□□ -0.43
TIMM9-205ENST00000555404 PRDM2Q13029 1718 aa12.37□□□□□ -0.43
TIMM9-205ENST00000555404 EEA1Q15075 1411 aa12.35□□□□□ -0.43
TIMM9-205ENST00000555404 AKT1S1Q96B36 256 aa12.34□□□□□ -0.43
TIMM9-205ENST00000555404 ERCC6Q03468 1493 aa12.34□□□□□ -0.43
TIMM9-205ENST00000555404 FXR2P51116 673 aaKnown RBP eCLIP12.33□□□□□ -0.44
TIMM9-205ENST00000555404 NPM3O75607 178 aaKnown RBP12.32□□□□□ -0.44
TIMM9-205ENST00000555404 NESP48681 1621 aa12.32□□□□□ -0.44
TIMM9-205ENST00000555404 TOP2BQ02880 1626 aa12.29□□□□□ -0.44
TIMM9-205ENST00000555404 MRC2Q9UBG0 1479 aa12.25□□□□□ -0.45
TIMM9-205ENST00000555404 DNMBPQ6XZF7 1577 aa12.25□□□□□ -0.45
TIMM9-205ENST00000555404 REM2Q8IYK8 340 aaPredicted RBP12.24□□□□□ -0.45
TIMM9-205ENST00000555404 CSRNP3Q8WYN3 585 aa12.24□□□□□ -0.45
TIMM9-205ENST00000555404 BIVM-ERCC5R4GMW8 1640 aa12.23□□□□□ -0.45
TIMM9-205ENST00000555404 KIF27Q86VH2 1401 aa12.23□□□□□ -0.45
TIMM9-205ENST00000555404 FAM9AQ8IZU1 332 aaPredicted RBP12.22□□□□□ -0.45
TIMM9-205ENST00000555404 CUX1P39880 1505 aa12.21□□□□□ -0.45
TIMM9-205ENST00000555404 TOPBP1Q92547 1522 aa12.21□□□□□ -0.45
TIMM9-205ENST00000555404 SOGA1O94964 1423 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms