RNA–Protein interactions for RNA: ENST00000555234.1

PGF-204, Transcript of placental growth factor, humanhuman

TSL 2

Gene PGF, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGF-204ENST00000555234 NISCHQ9Y2I1 1504 aa42■■■■■ 4.31
PGF-204ENST00000555234 CCDC180Q9P1Z9 1646 aa37.69■■■■□ 3.62
PGF-204ENST00000555234 ABCC9O60706 1549 aa37.68■■■■□ 3.62
PGF-204ENST00000555234 RB1CC1Q8TDY2 1594 aa35.84■■■■□ 3.33
PGF-204ENST00000555234 NACADO15069 1562 aa35.58■■■■□ 3.29
PGF-204ENST00000555234 DCAF8L2P0C7V8 631 aa35.46■■■■□ 3.27
PGF-204ENST00000555234 DNAJC5BQ9UF47 199 aa35.24■■■■□ 3.23
PGF-204ENST00000555234 UNC13AQ9UPW8 1703 aa35.12■■■■□ 3.21
PGF-204ENST00000555234 PABPN1Q86U42 306 aaKnown RBP eCLIP35.06■■■■□ 3.2
PGF-204ENST00000555234 MYO15BQ96JP2 1530 aa35.06■■■■□ 3.2
PGF-204ENST00000555234 ZCCHC6Q5VYS8 1495 aaKnown RBP34.84■■■■□ 3.17
PGF-204ENST00000555234 BICRAQ9NZM4 1560 aa34.82■■■■□ 3.16
PGF-204ENST00000555234 DCAF1Q9Y4B6 1507 aa34.65■■■■□ 3.14
PGF-204ENST00000555234 SCRIBQ14160 1630 aa34.42■■■■□ 3.1
PGF-204ENST00000555234 SHROOM4Q9ULL8 1493 aa34.27■■■■□ 3.08
PGF-204ENST00000555234 CC2D2AQ9P2K1 1620 aa34.03■■■■□ 3.04
PGF-204ENST00000555234 EIF4G1Q04637 1599 aaKnown RBP33.96■■■■□ 3.03
PGF-204ENST00000555234 CECR2Q9BXF3 1484 aa33.89■■■■□ 3.02
PGF-204ENST00000555234 NCAPD3P42695 1498 aa32.82■■■□□ 2.84
PGF-204ENST00000555234 SMARCA4P51532 1647 aa32.8■■■□□ 2.84
PGF-204ENST00000555234 ATAD2BQ9ULI0 1458 aa32.77■■■□□ 2.84
PGF-204ENST00000555234 SMARCA2P51531 1590 aa32.68■■■□□ 2.82
PGF-204ENST00000555234 HMGXB3Q12766 1538 aa32.62■■■□□ 2.81
PGF-204ENST00000555234 BAZ1AQ9NRL2 1556 aaPredicted RBP32.6■■■□□ 2.81
PGF-204ENST00000555234 ERCC6Q03468 1493 aa32.51■■■□□ 2.79
PGF-204ENST00000555234 BAZ1BQ9UIG0 1483 aaKnown RBP32.48■■■□□ 2.79
PGF-204ENST00000555234 PEG3Q9GZU2 1588 aa32.42■■■□□ 2.78
PGF-204ENST00000555234 MROH2BQ7Z745 1585 aa32.41■■■□□ 2.78
PGF-204ENST00000555234 NESP48681 1621 aa32.39■■■□□ 2.78
PGF-204ENST00000555234 CUX2O14529 1486 aa32.38■■■□□ 2.77
PGF-204ENST00000555234 DNAJC5Q9H3Z4 198 aa32.28■■■□□ 2.76
PGF-204ENST00000555234 LAMC3Q9Y6N6 1575 aa32.11■■■□□ 2.73
PGF-204ENST00000555234 WIZO95785 1651 aa32.05■■■□□ 2.72
PGF-204ENST00000555234 THOC2Q8NI27 1593 aaKnown RBP32.05■■■□□ 2.72
PGF-204ENST00000555234 KIF21AQ7Z4S6 1674 aa32.01■■■□□ 2.71
PGF-204ENST00000555234 PDS5BQ9NTI5 1447 aa31.9■■■□□ 2.7
PGF-204ENST00000555234 CADPSQ9ULU8 1353 aa31.84■■■□□ 2.69
PGF-204ENST00000555234 RSF1Q96T23 1441 aaPredicted RBP31.71■■■□□ 2.67
PGF-204ENST00000555234 MRC2Q9UBG0 1479 aa31.67■■■□□ 2.66
PGF-204ENST00000555234 TOP2AP11388 1531 aaKnown RBP31.61■■■□□ 2.65
PGF-204ENST00000555234 WDR62O43379 1518 aa31.59■■■□□ 2.65
PGF-204ENST00000555234 CEP164Q9UPV0 1460 aa31.56■■■□□ 2.64
PGF-204ENST00000555234 FANCD2Q9BXW9 1451 aa31.52■■■□□ 2.64
PGF-204ENST00000555234 CFTRP13569 1480 aa31.49■■■□□ 2.63
PGF-204ENST00000555234 PRDM2Q13029 1718 aa31.29■■■□□ 2.6
PGF-204ENST00000555234 URB2Q14146 1524 aaKnown RBP31.28■■■□□ 2.6
PGF-204ENST00000555234 CCDC88BA6NC98 1476 aa31.23■■■□□ 2.59
PGF-204ENST00000555234 TRIM41Q8WV44 630 aa30.98■■■□□ 2.55
PGF-204ENST00000555234 TOPBP1Q92547 1522 aa30.94■■■□□ 2.54
PGF-204ENST00000555234 IFT140Q96RY7 1462 aa30.9■■■□□ 2.54
PGF-204ENST00000555234 ZNF608Q9ULD9 1512 aaPredicted RBP30.89■■■□□ 2.54
PGF-204ENST00000555234 OSCARQ8IYS5 282 aa30.88■■■□□ 2.53
PGF-204ENST00000555234 DNMBPQ6XZF7 1577 aa30.83■■■□□ 2.53
PGF-204ENST00000555234 ABCC8Q09428 1581 aa30.81■■■□□ 2.52
PGF-204ENST00000555234 EIF4G3O43432 1585 aaKnown RBP30.75■■■□□ 2.51
PGF-204ENST00000555234 TARBP1Q13395 1621 aaKnown RBP30.66■■■□□ 2.5
PGF-204ENST00000555234 POLA1P09884 1462 aaPredicted RBP30.63■■■□□ 2.49
PGF-204ENST00000555234 AQRO60306 1485 aaKnown RBP eCLIP30.6■■■□□ 2.498e-7■■■■■ 28.4
PGF-204ENST00000555234 RIMBP3CA6NJZ7 1639 aa30.58■■■□□ 2.49
PGF-204ENST00000555234 RIMBP3BA6NNM3 1639 aa30.58■■■□□ 2.49
PGF-204ENST00000555234 RIMBP3Q9UFD9 1639 aa30.58■■■□□ 2.49
PGF-204ENST00000555234 CHD1O14646 1710 aa30.54■■■□□ 2.48
PGF-204ENST00000555234 RAD54L2Q9Y4B4 1467 aa30.53■■■□□ 2.48
PGF-204ENST00000555234 FGD5Q6ZNL6 1462 aa30.46■■■□□ 2.47
PGF-204ENST00000555234 ARHGEF11O15085 1522 aa30.46■■■□□ 2.47
PGF-204ENST00000555234 SOGA1O94964 1423 aa30.46■■■□□ 2.47
PGF-204ENST00000555234 CUX1P39880 1505 aa30.45■■■□□ 2.47
PGF-204ENST00000555234 TDRD9Q8NDG6 1382 aaKnown RBP30.41■■■□□ 2.46
PGF-204ENST00000555234 SUPT5HO00267 1087 aaKnown RBP30.39■■■□□ 2.46
PGF-204ENST00000555234 FBLN2P98095 1184 aa30.39■■■□□ 2.46
PGF-204ENST00000555234 SNAPC4Q5SXM2 1469 aa30.31■■■□□ 2.44
PGF-204ENST00000555234 WDR97A6NE52 1622 aa30.31■■■□□ 2.44
PGF-204ENST00000555234 CYB5RLQ6IPT4 315 aa30.2■■■□□ 2.43
PGF-204ENST00000555234 GRIN2BQ13224 1484 aa30.19■■■□□ 2.42
PGF-204ENST00000555234 MAGI1Q96QZ7 1491 aaPredicted RBP30.19■■■□□ 2.42
PGF-204ENST00000555234 ARAP1Q96P48 1450 aa30.18■■■□□ 2.42
PGF-204ENST00000555234 PBRM1Q86U86 1689 aa30.17■■■□□ 2.42
PGF-204ENST00000555234 CLASP1Q7Z460 1538 aa30.13■■■□□ 2.41
PGF-204ENST00000555234 CHMP7Q8WUX9 453 aaPredicted RBP30.13■■■□□ 2.41
PGF-204ENST00000555234 SYNJ1O43426 1573 aa30.11■■■□□ 2.41
PGF-204ENST00000555234 GAPVD1Q14C86 1478 aa30.11■■■□□ 2.41
PGF-204ENST00000555234 SYNJ2O15056 1496 aa30.09■■■□□ 2.41
PGF-204ENST00000555234 ABCA10Q8WWZ4 1543 aa30.08■■■□□ 2.41
PGF-204ENST00000555234 ABCA5Q8WWZ7 1642 aa30.07■■■□□ 2.4
PGF-204ENST00000555234 BIVM-ERCC5R4GMW8 1640 aa29.98■■■□□ 2.39
PGF-204ENST00000555234 TOP2BQ02880 1626 aa29.95■■■□□ 2.38
PGF-204ENST00000555234 WRNQ14191 1432 aaPredicted RBP eCLIP29.95■■■□□ 2.38
PGF-204ENST00000555234 TRHP20396 242 aaPredicted RBP29.87■■■□□ 2.37
PGF-204ENST00000555234 ADAMTS12P58397 1594 aa29.86■■■□□ 2.37
PGF-204ENST00000555234 GRIN2AQ12879 1464 aa29.83■■■□□ 2.37
PGF-204ENST00000555234 CEP170Q5SW79 1584 aa29.75■■■□□ 2.35
PGF-204ENST00000555234 FHAD1B1AJZ9 1412 aa29.71■■■□□ 2.35
PGF-204ENST00000555234 ERCC6L2Q5T890 1561 aa29.71■■■□□ 2.35
PGF-204ENST00000555234 NUP160Q12769 1436 aa29.71■■■□□ 2.35
PGF-204ENST00000555234 ERICH3Q5RHP9 1530 aa29.7■■■□□ 2.34
PGF-204ENST00000555234 SHROOM2Q13796 1616 aa29.59■■■□□ 2.33
PGF-204ENST00000555234 RUSC2Q8N2Y8 1516 aa29.43■■■□□ 2.3
PGF-204ENST00000555234 PRG4Q92954 1404 aaPredicted RBP29.43■■■□□ 2.3
PGF-204ENST00000555234 JPH4Q96JJ6 628 aa29.37■■■□□ 2.29
PGF-204ENST00000555234 KIF27Q86VH2 1401 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms