RNA–Protein interactions for RNA: ENST00000554969.5

HNRNPC-214, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 5 BASIC

Gene HNRNPC, Length 1,924 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-214ENST00000554969 NISCHQ9Y2I1 1504 aa26.4■■□□□ 1.82
HNRNPC-214ENST00000554969 CCDC180Q9P1Z9 1646 aa23.41■■□□□ 1.34
HNRNPC-214ENST00000554969 ABCC9O60706 1549 aa22.9■■□□□ 1.26
HNRNPC-214ENST00000554969 ZCCHC6Q5VYS8 1495 aaKnown RBP22.01■■□□□ 1.11
HNRNPC-214ENST00000554969 DCAF8L2P0C7V8 631 aa22■■□□□ 1.11
HNRNPC-214ENST00000554969 RB1CC1Q8TDY2 1594 aa21.98■■□□□ 1.11
HNRNPC-214ENST00000554969 NACADO15069 1562 aa21.96■■□□□ 1.11
HNRNPC-214ENST00000554969 MYO15BQ96JP2 1530 aa21.83■■□□□ 1.09
HNRNPC-214ENST00000554969 DCAF1Q9Y4B6 1507 aa21.79■■□□□ 1.08
HNRNPC-214ENST00000554969 UNC13AQ9UPW8 1703 aa21.64■■□□□ 1.05
HNRNPC-214ENST00000554969 SCRIBQ14160 1630 aa21.44■■□□□ 1.02
HNRNPC-214ENST00000554969 BICRAQ9NZM4 1560 aa21.43■■□□□ 1.02
HNRNPC-214ENST00000554969 PABPN1Q86U42 306 aaKnown RBP eCLIP21.41■■□□□ 1.02
HNRNPC-214ENST00000554969 SHROOM4Q9ULL8 1493 aa21.03■□□□□ 0.96
HNRNPC-214ENST00000554969 DNAJC5BQ9UF47 199 aa21.02■□□□□ 0.96
HNRNPC-214ENST00000554969 EIF4G1Q04637 1599 aaKnown RBP20.81■□□□□ 0.92
HNRNPC-214ENST00000554969 CC2D2AQ9P2K1 1620 aa20.72■□□□□ 0.91
HNRNPC-214ENST00000554969 CECR2Q9BXF3 1484 aa20.63■□□□□ 0.89
HNRNPC-214ENST00000554969 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
HNRNPC-214ENST00000554969 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
HNRNPC-214ENST00000554969 MROH2BQ7Z745 1585 aa20.4■□□□□ 0.86
HNRNPC-214ENST00000554969 ATAD2BQ9ULI0 1458 aa20.34■□□□□ 0.85
HNRNPC-214ENST00000554969 NCAPD3P42695 1498 aa20.28■□□□□ 0.84
HNRNPC-214ENST00000554969 SMARCA2P51531 1590 aa20.26■□□□□ 0.83
HNRNPC-214ENST00000554969 PEG3Q9GZU2 1588 aa20.26■□□□□ 0.83
HNRNPC-214ENST00000554969 WIZO95785 1651 aa20.2■□□□□ 0.82
HNRNPC-214ENST00000554969 HMGXB3Q12766 1538 aa20.2■□□□□ 0.82
HNRNPC-214ENST00000554969 RSF1Q96T23 1441 aaPredicted RBP20.15■□□□□ 0.82
HNRNPC-214ENST00000554969 BAZ1BQ9UIG0 1483 aaKnown RBP20.15■□□□□ 0.82
HNRNPC-214ENST00000554969 TOP2AP11388 1531 aaKnown RBP19.91■□□□□ 0.78
HNRNPC-214ENST00000554969 NESP48681 1621 aa19.88■□□□□ 0.77
HNRNPC-214ENST00000554969 LAMC3Q9Y6N6 1575 aa19.74■□□□□ 0.75
HNRNPC-214ENST00000554969 CCDC88BA6NC98 1476 aa19.71■□□□□ 0.75
HNRNPC-214ENST00000554969 CADPSQ9ULU8 1353 aa19.7■□□□□ 0.74
HNRNPC-214ENST00000554969 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
HNRNPC-214ENST00000554969 ERCC6Q03468 1493 aa19.65■□□□□ 0.74
HNRNPC-214ENST00000554969 KIF21AQ7Z4S6 1674 aa19.65■□□□□ 0.74
HNRNPC-214ENST00000554969 CFTRP13569 1480 aa19.61■□□□□ 0.73
HNRNPC-214ENST00000554969 PDS5BQ9NTI5 1447 aa19.56■□□□□ 0.72
HNRNPC-214ENST00000554969 THOC2Q8NI27 1593 aaKnown RBP19.54■□□□□ 0.72
HNRNPC-214ENST00000554969 PRDM2Q13029 1718 aa19.5■□□□□ 0.71
HNRNPC-214ENST00000554969 FANCD2Q9BXW9 1451 aa19.49■□□□□ 0.71
HNRNPC-214ENST00000554969 CEP164Q9UPV0 1460 aa19.44■□□□□ 0.7
HNRNPC-214ENST00000554969 CUX2O14529 1486 aa19.4■□□□□ 0.7
HNRNPC-214ENST00000554969 MRC2Q9UBG0 1479 aa19.39■□□□□ 0.69
HNRNPC-214ENST00000554969 WDR62O43379 1518 aa19.36■□□□□ 0.69
HNRNPC-214ENST00000554969 URB2Q14146 1524 aaKnown RBP19.34■□□□□ 0.69
HNRNPC-214ENST00000554969 TOPBP1Q92547 1522 aa19.2■□□□□ 0.66
HNRNPC-214ENST00000554969 DNMBPQ6XZF7 1577 aa19.17■□□□□ 0.66
HNRNPC-214ENST00000554969 CUX1P39880 1505 aa19.12■□□□□ 0.65
HNRNPC-214ENST00000554969 ABCC8Q09428 1581 aa19.09■□□□□ 0.65
HNRNPC-214ENST00000554969 POLA1P09884 1462 aaPredicted RBP19.05■□□□□ 0.64
HNRNPC-214ENST00000554969 ZNF608Q9ULD9 1512 aaPredicted RBP19.03■□□□□ 0.64
HNRNPC-214ENST00000554969 TARBP1Q13395 1621 aaKnown RBP19.02■□□□□ 0.64
HNRNPC-214ENST00000554969 FGD5Q6ZNL6 1462 aa19.01■□□□□ 0.63
HNRNPC-214ENST00000554969 IFT140Q96RY7 1462 aa19■□□□□ 0.63
HNRNPC-214ENST00000554969 RAD54L2Q9Y4B4 1467 aa19■□□□□ 0.63
HNRNPC-214ENST00000554969 SYNJ1O43426 1573 aa19■□□□□ 0.63
HNRNPC-214ENST00000554969 WRNQ14191 1432 aaPredicted RBP eCLIP18.96■□□□□ 0.63
HNRNPC-214ENST00000554969 BIVM-ERCC5R4GMW8 1640 aa18.95■□□□□ 0.62
HNRNPC-214ENST00000554969 TOP2BQ02880 1626 aa18.94■□□□□ 0.62
HNRNPC-214ENST00000554969 SOGA1O94964 1423 aa18.93■□□□□ 0.62
HNRNPC-214ENST00000554969 EIF4G3O43432 1585 aaKnown RBP18.93■□□□□ 0.62
HNRNPC-214ENST00000554969 AQRO60306 1485 aaKnown RBP eCLIP18.9■□□□□ 0.622e-7■■■■□ 24.5
HNRNPC-214ENST00000554969 WDR97A6NE52 1622 aa18.9■□□□□ 0.62
HNRNPC-214ENST00000554969 TDRD9Q8NDG6 1382 aaKnown RBP18.86■□□□□ 0.61
HNRNPC-214ENST00000554969 ABCA10Q8WWZ4 1543 aa18.81■□□□□ 0.6
HNRNPC-214ENST00000554969 ABCA5Q8WWZ7 1642 aa18.77■□□□□ 0.6
HNRNPC-214ENST00000554969 DNAJC5Q9H3Z4 198 aa18.76■□□□□ 0.59
HNRNPC-214ENST00000554969 PBRM1Q86U86 1689 aa18.74■□□□□ 0.59
HNRNPC-214ENST00000554969 GAPVD1Q14C86 1478 aa18.72■□□□□ 0.59
HNRNPC-214ENST00000554969 SNAPC4Q5SXM2 1469 aa18.7■□□□□ 0.58
HNRNPC-214ENST00000554969 CHD1O14646 1710 aa18.7■□□□□ 0.58
HNRNPC-214ENST00000554969 GRIN2BQ13224 1484 aa18.69■□□□□ 0.58
HNRNPC-214ENST00000554969 MAGI1Q96QZ7 1491 aaPredicted RBP18.63■□□□□ 0.57
HNRNPC-214ENST00000554969 FBLN2P98095 1184 aa18.61■□□□□ 0.57
HNRNPC-214ENST00000554969 OSCARQ8IYS5 282 aa18.61■□□□□ 0.57
HNRNPC-214ENST00000554969 ADAMTS12P58397 1594 aa18.57■□□□□ 0.56
HNRNPC-214ENST00000554969 SYNJ2O15056 1496 aa18.57■□□□□ 0.56
HNRNPC-214ENST00000554969 ERICH3Q5RHP9 1530 aa18.57■□□□□ 0.56
HNRNPC-214ENST00000554969 TRIM41Q8WV44 630 aa18.53■□□□□ 0.56
HNRNPC-214ENST00000554969 RUSC2Q8N2Y8 1516 aa18.53■□□□□ 0.56
HNRNPC-214ENST00000554969 CHMP7Q8WUX9 453 aaPredicted RBP18.53■□□□□ 0.56
HNRNPC-214ENST00000554969 KIF27Q86VH2 1401 aa18.52■□□□□ 0.56
HNRNPC-214ENST00000554969 IGF1RP08069 1367 aa18.49■□□□□ 0.55
HNRNPC-214ENST00000554969 GRIN2AQ12879 1464 aa18.48■□□□□ 0.55
HNRNPC-214ENST00000554969 FHAD1B1AJZ9 1412 aa18.48■□□□□ 0.55
HNRNPC-214ENST00000554969 CLASP1Q7Z460 1538 aa18.46■□□□□ 0.55
HNRNPC-214ENST00000554969 CEP170Q5SW79 1584 aa18.44■□□□□ 0.54
HNRNPC-214ENST00000554969 CHIC1Q5VXU3 224 aa18.42■□□□□ 0.54
HNRNPC-214ENST00000554969 CUL7Q14999 1698 aa18.42■□□□□ 0.54
HNRNPC-214ENST00000554969 RIMBP3CA6NJZ7 1639 aa18.4■□□□□ 0.54
HNRNPC-214ENST00000554969 RIMBP3BA6NNM3 1639 aa18.4■□□□□ 0.54
HNRNPC-214ENST00000554969 RIMBP3Q9UFD9 1639 aa18.4■□□□□ 0.54
HNRNPC-214ENST00000554969 NUP160Q12769 1436 aa18.39■□□□□ 0.54
HNRNPC-214ENST00000554969 ARHGEF11O15085 1522 aa18.39■□□□□ 0.53
HNRNPC-214ENST00000554969 CARMIL1Q5VZK9 1371 aa18.35■□□□□ 0.53
HNRNPC-214ENST00000554969 ERCC6L2Q5T890 1561 aa18.29■□□□□ 0.52
HNRNPC-214ENST00000554969 SHROOM2Q13796 1616 aa18.28■□□□□ 0.52
HNRNPC-214ENST00000554969 ARAP1Q96P48 1450 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms