RNA–Protein interactions for RNA: ENST00000554716.5

PRMT5-215, Transcript of protein arginine methyltransferase 5, humanhuman

TSL 4

Gene PRMT5, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRMT5-215ENST00000554716 NISCHQ9Y2I1 1504 aa52.58■■■■■ 6.01
PRMT5-215ENST00000554716 CCDC180Q9P1Z9 1646 aa47.18■■■■■ 5.14
PRMT5-215ENST00000554716 ABCC9O60706 1549 aa47.13■■■■■ 5.14
PRMT5-215ENST00000554716 RB1CC1Q8TDY2 1594 aa44.91■■■■■ 4.78
PRMT5-215ENST00000554716 NACADO15069 1562 aa44.62■■■■■ 4.73
PRMT5-215ENST00000554716 DCAF8L2P0C7V8 631 aa44.39■■■■■ 4.7
PRMT5-215ENST00000554716 DNAJC5BQ9UF47 199 aa44.17■■■■■ 4.66
PRMT5-215ENST00000554716 MYO15BQ96JP2 1530 aa44.03■■■■■ 4.64
PRMT5-215ENST00000554716 PABPN1Q86U42 306 aaKnown RBP eCLIP43.88■■■■■ 4.62
PRMT5-215ENST00000554716 UNC13AQ9UPW8 1703 aa43.84■■■■■ 4.61
PRMT5-215ENST00000554716 ZCCHC6Q5VYS8 1495 aaKnown RBP43.57■■■■■ 4.57
PRMT5-215ENST00000554716 BICRAQ9NZM4 1560 aa43.55■■■■■ 4.56
PRMT5-215ENST00000554716 DCAF1Q9Y4B6 1507 aa43.46■■■■■ 4.55
PRMT5-215ENST00000554716 SHROOM4Q9ULL8 1493 aa43.05■■■■■ 4.48
PRMT5-215ENST00000554716 SCRIBQ14160 1630 aa42.95■■■■■ 4.47
PRMT5-215ENST00000554716 CC2D2AQ9P2K1 1620 aa42.58■■■■■ 4.41
PRMT5-215ENST00000554716 EIF4G1Q04637 1599 aaKnown RBP42.51■■■■■ 4.4
PRMT5-215ENST00000554716 CECR2Q9BXF3 1484 aa42.47■■■■■ 4.39
PRMT5-215ENST00000554716 NCAPD3P42695 1498 aa41.19■■■■■ 4.18
PRMT5-215ENST00000554716 ATAD2BQ9ULI0 1458 aa41.04■■■■■ 4.16
PRMT5-215ENST00000554716 SMARCA4P51532 1647 aa41■■■■■ 4.15
PRMT5-215ENST00000554716 SMARCA2P51531 1590 aa40.95■■■■■ 4.15
PRMT5-215ENST00000554716 HMGXB3Q12766 1538 aa40.88■■■■■ 4.13
PRMT5-215ENST00000554716 BAZ1AQ9NRL2 1556 aaPredicted RBP40.83■■■■■ 4.13
PRMT5-215ENST00000554716 ERCC6Q03468 1493 aa40.72■■■■■ 4.11
PRMT5-215ENST00000554716 BAZ1BQ9UIG0 1483 aaKnown RBP40.66■■■■■ 4.1
PRMT5-215ENST00000554716 CUX2O14529 1486 aa40.65■■■■■ 4.1
PRMT5-215ENST00000554716 PEG3Q9GZU2 1588 aa40.62■■■■■ 4.09
PRMT5-215ENST00000554716 DNAJC5Q9H3Z4 198 aa40.6■■■■■ 4.09
PRMT5-215ENST00000554716 MROH2BQ7Z745 1585 aa40.48■■■■■ 4.07
PRMT5-215ENST00000554716 NESP48681 1621 aa40.47■■■■■ 4.07
PRMT5-215ENST00000554716 LAMC3Q9Y6N6 1575 aa40.26■■■■■ 4.04
PRMT5-215ENST00000554716 THOC2Q8NI27 1593 aaKnown RBP40.07■■■■■ 4.01
PRMT5-215ENST00000554716 PDS5BQ9NTI5 1447 aa40.04■■■■■ 4
PRMT5-215ENST00000554716 WIZO95785 1651 aa40■■■■□ 3.99
PRMT5-215ENST00000554716 KIF21AQ7Z4S6 1674 aa39.96■■■■□ 3.99
PRMT5-215ENST00000554716 CADPSQ9ULU8 1353 aa39.94■■■■□ 3.98
PRMT5-215ENST00000554716 RSF1Q96T23 1441 aaPredicted RBP39.67■■■■□ 3.94
PRMT5-215ENST00000554716 MRC2Q9UBG0 1479 aa39.66■■■■□ 3.94
PRMT5-215ENST00000554716 WDR62O43379 1518 aa39.56■■■■□ 3.92
PRMT5-215ENST00000554716 TOP2AP11388 1531 aaKnown RBP39.52■■■■□ 3.92
PRMT5-215ENST00000554716 CEP164Q9UPV0 1460 aa39.51■■■■□ 3.92
PRMT5-215ENST00000554716 CFTRP13569 1480 aa39.48■■■■□ 3.91
PRMT5-215ENST00000554716 FANCD2Q9BXW9 1451 aa39.47■■■■□ 3.91
PRMT5-215ENST00000554716 URB2Q14146 1524 aaKnown RBP39.11■■■■□ 3.85
PRMT5-215ENST00000554716 PRDM2Q13029 1718 aa39.08■■■■□ 3.85
PRMT5-215ENST00000554716 CCDC88BA6NC98 1476 aa39.07■■■■□ 3.85
PRMT5-215ENST00000554716 OSCARQ8IYS5 282 aa38.82■■■■□ 3.8
PRMT5-215ENST00000554716 TRIM41Q8WV44 630 aa38.81■■■■□ 3.8
PRMT5-215ENST00000554716 IFT140Q96RY7 1462 aa38.73■■■■□ 3.79
PRMT5-215ENST00000554716 TOPBP1Q92547 1522 aa38.72■■■■□ 3.79
PRMT5-215ENST00000554716 ABCC8Q09428 1581 aa38.7■■■■□ 3.79
PRMT5-215ENST00000554716 ZNF608Q9ULD9 1512 aaPredicted RBP38.62■■■■□ 3.77
PRMT5-215ENST00000554716 DNMBPQ6XZF7 1577 aa38.58■■■■□ 3.77
PRMT5-215ENST00000554716 EIF4G3O43432 1585 aaKnown RBP38.42■■■■□ 3.74
PRMT5-215ENST00000554716 TARBP1Q13395 1621 aaKnown RBP38.36■■■■□ 3.73
PRMT5-215ENST00000554716 POLA1P09884 1462 aaPredicted RBP38.32■■■■□ 3.72
PRMT5-215ENST00000554716 AQRO60306 1485 aaKnown RBP eCLIP38.29■■■■□ 3.724e-7■■■■■ 27.4
PRMT5-215ENST00000554716 RIMBP3CA6NJZ7 1639 aa38.25■■■■□ 3.71
PRMT5-215ENST00000554716 RIMBP3BA6NNM3 1639 aa38.25■■■■□ 3.71
PRMT5-215ENST00000554716 RIMBP3Q9UFD9 1639 aa38.25■■■■□ 3.71
PRMT5-215ENST00000554716 SOGA1O94964 1423 aa38.18■■■■□ 3.7
PRMT5-215ENST00000554716 RAD54L2Q9Y4B4 1467 aa38.16■■■■□ 3.7
PRMT5-215ENST00000554716 ARHGEF11O15085 1522 aa38.15■■■■□ 3.7
PRMT5-215ENST00000554716 CHD1O14646 1710 aa38.12■■■■□ 3.69
PRMT5-215ENST00000554716 FGD5Q6ZNL6 1462 aa38.09■■■■□ 3.69
PRMT5-215ENST00000554716 FBLN2P98095 1184 aa38.07■■■■□ 3.68
PRMT5-215ENST00000554716 TDRD9Q8NDG6 1382 aaKnown RBP38.06■■■■□ 3.68
PRMT5-215ENST00000554716 CUX1P39880 1505 aa38.03■■■■□ 3.68
PRMT5-215ENST00000554716 WDR97A6NE52 1622 aa38.02■■■■□ 3.68
PRMT5-215ENST00000554716 SUPT5HO00267 1087 aaKnown RBP37.95■■■■□ 3.67
PRMT5-215ENST00000554716 SNAPC4Q5SXM2 1469 aa37.9■■■■□ 3.66
PRMT5-215ENST00000554716 CYB5RLQ6IPT4 315 aa37.89■■■■□ 3.66
PRMT5-215ENST00000554716 GRIN2BQ13224 1484 aa37.84■■■■□ 3.65
PRMT5-215ENST00000554716 MAGI1Q96QZ7 1491 aaPredicted RBP37.84■■■■□ 3.65
PRMT5-215ENST00000554716 CHMP7Q8WUX9 453 aaPredicted RBP37.81■■■■□ 3.64
PRMT5-215ENST00000554716 ARAP1Q96P48 1450 aa37.76■■■■□ 3.63
PRMT5-215ENST00000554716 SYNJ1O43426 1573 aa37.72■■■■□ 3.63
PRMT5-215ENST00000554716 SYNJ2O15056 1496 aa37.71■■■■□ 3.63
PRMT5-215ENST00000554716 GAPVD1Q14C86 1478 aa37.71■■■■□ 3.63
PRMT5-215ENST00000554716 CLASP1Q7Z460 1538 aa37.7■■■■□ 3.63
PRMT5-215ENST00000554716 ABCA10Q8WWZ4 1543 aa37.67■■■■□ 3.62
PRMT5-215ENST00000554716 PBRM1Q86U86 1689 aa37.66■■■■□ 3.62
PRMT5-215ENST00000554716 ABCA5Q8WWZ7 1642 aa37.59■■■■□ 3.61
PRMT5-215ENST00000554716 WRNQ14191 1432 aaPredicted RBP eCLIP37.54■■■■□ 3.6
PRMT5-215ENST00000554716 TRHP20396 242 aaPredicted RBP37.48■■■■□ 3.59
PRMT5-215ENST00000554716 TOP2BQ02880 1626 aa37.46■■■■□ 3.59
PRMT5-215ENST00000554716 BIVM-ERCC5R4GMW8 1640 aa37.46■■■■□ 3.59
PRMT5-215ENST00000554716 GRIN2AQ12879 1464 aa37.34■■■■□ 3.57
PRMT5-215ENST00000554716 ADAMTS12P58397 1594 aa37.3■■■■□ 3.56
PRMT5-215ENST00000554716 FHAD1B1AJZ9 1412 aa37.23■■■■□ 3.55
PRMT5-215ENST00000554716 NUP160Q12769 1436 aa37.21■■■■□ 3.55
PRMT5-215ENST00000554716 ERICH3Q5RHP9 1530 aa37.2■■■■□ 3.55
PRMT5-215ENST00000554716 CEP170Q5SW79 1584 aa37.18■■■■□ 3.54
PRMT5-215ENST00000554716 ERCC6L2Q5T890 1561 aa37.08■■■■□ 3.53
PRMT5-215ENST00000554716 SHROOM2Q13796 1616 aa37.04■■■■□ 3.52
PRMT5-215ENST00000554716 PRG4Q92954 1404 aaPredicted RBP36.86■■■■□ 3.49
PRMT5-215ENST00000554716 JPH4Q96JJ6 628 aa36.86■■■■□ 3.49
PRMT5-215ENST00000554716 RUSC2Q8N2Y8 1516 aa36.77■■■■□ 3.48
PRMT5-215ENST00000554716 KIF27Q86VH2 1401 aa36.76■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms