RNA–Protein interactions for RNA: ENST00000554412.2

AC027013.1-201, humanhuman

TSL 2 BASIC

Gene AC027013.1, Length 1,057 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027013.1-201ENST00000554412 AEBP2Q6ZN18 517 aaPredicted RBP31.17■■■□□ 2.58
AC027013.1-201ENST00000554412 CHIC1Q5VXU3 224 aa29.03■■■□□ 2.24
AC027013.1-201ENST00000554412 SENP3Q9H4L4 574 aaPredicted RBP26.5■■□□□ 1.83
AC027013.1-201ENST00000554412 PHF23Q9BUL5 403 aaPredicted RBP26.14■■□□□ 1.78
AC027013.1-201ENST00000554412 FOXD1Q16676 465 aa24.85■■□□□ 1.57
AC027013.1-201ENST00000554412 POTEDQ86YR6 584 aa23.71■■□□□ 1.39
AC027013.1-201ENST00000554412 MSH5O43196 834 aa23.33■■□□□ 1.33
AC027013.1-201ENST00000554412 PIAS4Q8N2W9 510 aaPredicted RBP23.01■■□□□ 1.27
AC027013.1-201ENST00000554412 PPP6R1Q9UPN7 881 aa22.92■■□□□ 1.26
AC027013.1-201ENST00000554412 PLPPR3Q6T4P5 718 aa22.89■■□□□ 1.25
AC027013.1-201ENST00000554412 ADRA2BP18089 450 aa22.76■■□□□ 1.23
AC027013.1-201ENST00000554412 MAPK8IP2Q13387 824 aaPredicted RBP21.08■□□□□ 0.97
AC027013.1-201ENST00000554412 DMRT2Q9Y5R5 561 aa20.99■□□□□ 0.95
AC027013.1-201ENST00000554412 NISCHQ9Y2I1 1504 aa20.68■□□□□ 0.9
AC027013.1-201ENST00000554412 SCAF1Q9H7N4 1312 aaKnown RBP20.66■□□□□ 0.9
AC027013.1-201ENST00000554412 CACNB1Q02641 598 aaPredicted RBP20.3■□□□□ 0.84
AC027013.1-201ENST00000554412 HOXD11P31277 338 aaPredicted RBP20.06■□□□□ 0.8
AC027013.1-201ENST00000554412 PPP4R3CPQ6ZMV5 832 aa20.04■□□□□ 0.8
AC027013.1-201ENST00000554412 DCAF8L1A6NGE4 600 aa20■□□□□ 0.79
AC027013.1-201ENST00000554412 RNF39Q9H2S5 420 aa19.96■□□□□ 0.79
AC027013.1-201ENST00000554412 CNKSR2Q8WXI2 1034 aa19.75■□□□□ 0.75
AC027013.1-201ENST00000554412 RNF216Q9NWF9 866 aaPredicted RBP19.72■□□□□ 0.75
AC027013.1-201ENST00000554412 C1QBPQ07021 282 aaKnown RBP19.57■□□□□ 0.72
AC027013.1-201ENST00000554412 DNAJC5BQ9UF47 199 aa19.45■□□□□ 0.7
AC027013.1-201ENST00000554412 ABCC9O60706 1549 aa19.01■□□□□ 0.63
AC027013.1-201ENST00000554412 NCBP3Q53F19 620 aaKnown RBP19.01■□□□□ 0.63
AC027013.1-201ENST00000554412 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.97■□□□□ 0.63
AC027013.1-201ENST00000554412 NPM3O75607 178 aaKnown RBP18.88■□□□□ 0.61
AC027013.1-201ENST00000554412 U3KPZ7 1027 aaPredicted RBP18.64■□□□□ 0.57
AC027013.1-201ENST00000554412 CCDC180Q9P1Z9 1646 aa18.62■□□□□ 0.57
AC027013.1-201ENST00000554412 DSG3P32926 999 aa18.52■□□□□ 0.56
AC027013.1-201ENST00000554412 SPINK5Q9NQ38 1064 aaPredicted RBP18.52■□□□□ 0.56
AC027013.1-201ENST00000554412 POTEHQ6S545 545 aa18.44■□□□□ 0.54
AC027013.1-201ENST00000554412 CAPN15O75808 1086 aa18.39■□□□□ 0.53
AC027013.1-201ENST00000554412 SLC4A2P04920 1241 aa18.22■□□□□ 0.51
AC027013.1-201ENST00000554412 KCNA4P22459 653 aa18.09■□□□□ 0.49
AC027013.1-201ENST00000554412 TRHP20396 242 aaPredicted RBP17.99■□□□□ 0.47
AC027013.1-201ENST00000554412 ABCB7O75027 752 aa17.97■□□□□ 0.47
AC027013.1-201ENST00000554412 ZNF219Q9P2Y4 722 aaPredicted RBP17.93■□□□□ 0.46
AC027013.1-201ENST00000554412 RB1CC1Q8TDY2 1594 aa17.91■□□□□ 0.46
AC027013.1-201ENST00000554412 APLP2Q06481 763 aa17.86■□□□□ 0.45
AC027013.1-201ENST00000554412 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.78■□□□□ 0.44
AC027013.1-201ENST00000554412 DCAF8L2P0C7V8 631 aa17.78■□□□□ 0.44
AC027013.1-201ENST00000554412 HNRNPUL2Q1KMD3 747 aaKnown RBP17.78■□□□□ 0.44
AC027013.1-201ENST00000554412 PABPN1Q86U42 306 aaKnown RBP eCLIP17.71■□□□□ 0.43
AC027013.1-201ENST00000554412 NACADO15069 1562 aa17.7■□□□□ 0.42
AC027013.1-201ENST00000554412 SAMD1Q6SPF0 538 aaPredicted RBP17.69■□□□□ 0.42
AC027013.1-201ENST00000554412 RBM42Q9BTD8 480 aaKnown RBP17.54■□□□□ 0.4
AC027013.1-201ENST00000554412 UNC13AQ9UPW8 1703 aa17.48■□□□□ 0.39
AC027013.1-201ENST00000554412 POLA2Q14181 598 aa17.44■□□□□ 0.38
AC027013.1-201ENST00000554412 CHRDL2Q6WN34 429 aa17.43■□□□□ 0.38
AC027013.1-201ENST00000554412 MYCNP04198 464 aaPredicted RBP17.39■□□□□ 0.37
AC027013.1-201ENST00000554412 BICRAQ9NZM4 1560 aa17.37■□□□□ 0.37
AC027013.1-201ENST00000554412 MYO15BQ96JP2 1530 aa17.31■□□□□ 0.36
AC027013.1-201ENST00000554412 ATF5Q9Y2D1 282 aaPredicted RBP17.17■□□□□ 0.34
AC027013.1-201ENST00000554412 CECR2Q9BXF3 1484 aa17.13■□□□□ 0.33
AC027013.1-201ENST00000554412 CC2D2AQ9P2K1 1620 aa17.11■□□□□ 0.33
AC027013.1-201ENST00000554412 AKT1S1Q96B36 256 aa17.11■□□□□ 0.33
AC027013.1-201ENST00000554412 EHMT2Q96KQ7 1210 aa17.09■□□□□ 0.33
AC027013.1-201ENST00000554412 SLC4A1APQ9BWU0 796 aaKnown RBP17.08■□□□□ 0.32
AC027013.1-201ENST00000554412 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
AC027013.1-201ENST00000554412 SHROOM4Q9ULL8 1493 aa17.05■□□□□ 0.32
AC027013.1-201ENST00000554412 SP7Q8TDD2 431 aaPredicted RBP17.05■□□□□ 0.32
AC027013.1-201ENST00000554412 SCRIBQ14160 1630 aa17.04■□□□□ 0.32
AC027013.1-201ENST00000554412 DCAF1Q9Y4B6 1507 aa17■□□□□ 0.31
AC027013.1-201ENST00000554412 EIF4G1Q04637 1599 aaKnown RBP16.98■□□□□ 0.31
AC027013.1-201ENST00000554412 REM2Q8IYK8 340 aaPredicted RBP16.98■□□□□ 0.31
AC027013.1-201ENST00000554412 FOXD4L1Q9NU39 408 aa16.96■□□□□ 0.31
AC027013.1-201ENST00000554412 PIP4P2Q8N4L2 257 aa16.95■□□□□ 0.3
AC027013.1-201ENST00000554412 ZBTB12Q9Y330 459 aaPredicted RBP16.95■□□□□ 0.3
AC027013.1-201ENST00000554412 OSCARQ8IYS5 282 aa16.91■□□□□ 0.3
AC027013.1-201ENST00000554412 PITPNM1O00562 1244 aa16.81■□□□□ 0.28
AC027013.1-201ENST00000554412 FXR2P51116 673 aaKnown RBP eCLIP16.79■□□□□ 0.28
AC027013.1-201ENST00000554412 DNAJC5Q9H3Z4 198 aa16.79■□□□□ 0.28
AC027013.1-201ENST00000554412 CSRNP3Q8WYN3 585 aa16.72■□□□□ 0.27
AC027013.1-201ENST00000554412 ZBTB22O15209 634 aa16.7■□□□□ 0.26
AC027013.1-201ENST00000554412 HAX1O00165 279 aa16.69■□□□□ 0.26
AC027013.1-201ENST00000554412 EVX2Q03828 476 aa16.62■□□□□ 0.25
AC027013.1-201ENST00000554412 ATXN8OSP0DMR3 200 aa16.5■□□□□ 0.23
AC027013.1-201ENST00000554412 SPDYE2BA6NHP3 402 aa16.46■□□□□ 0.23
AC027013.1-201ENST00000554412 SPDYE6P0CI01 402 aa16.46■□□□□ 0.23
AC027013.1-201ENST00000554412 SPDYE2Q495Y8 402 aa16.46■□□□□ 0.23
AC027013.1-201ENST00000554412 ERCC6Q03468 1493 aa16.44■□□□□ 0.22
AC027013.1-201ENST00000554412 CUX2O14529 1486 aa16.43■□□□□ 0.22
AC027013.1-201ENST00000554412 NCAPD3P42695 1498 aa16.35■□□□□ 0.21
AC027013.1-201ENST00000554412 MKRN4PQ13434 485 aaPredicted RBP16.35■□□□□ 0.21
AC027013.1-201ENST00000554412 PRKAR2AP13861 404 aaKnown RBP16.33■□□□□ 0.2
AC027013.1-201ENST00000554412 FBLN2P98095 1184 aa16.32■□□□□ 0.2
AC027013.1-201ENST00000554412 ATAD2BQ9ULI0 1458 aa16.29■□□□□ 0.2
AC027013.1-201ENST00000554412 C19orf67A6NJJ6 358 aa16.27■□□□□ 0.2
AC027013.1-201ENST00000554412 SPDYE1Q8NFV5 336 aaPredicted RBP16.26■□□□□ 0.19
AC027013.1-201ENST00000554412 SSUH2Q9Y2M2 353 aa16.26■□□□□ 0.19
AC027013.1-201ENST00000554412 NESP48681 1621 aa16.24■□□□□ 0.19
AC027013.1-201ENST00000554412 CLEC11AQ9Y240 323 aa16.24■□□□□ 0.19
AC027013.1-201ENST00000554412 SMARCA2P51531 1590 aa16.21■□□□□ 0.18
AC027013.1-201ENST00000554412 SMARCA4P51532 1647 aa16.18■□□□□ 0.18
AC027013.1-201ENST00000554412 HMGXB3Q12766 1538 aa16.18■□□□□ 0.18
AC027013.1-201ENST00000554412 ZNF692Q9BU19 519 aaPredicted RBP16.16■□□□□ 0.18
AC027013.1-201ENST00000554412 GABBR2O75899 941 aa16.14■□□□□ 0.17
AC027013.1-201ENST00000554412 BAZ1BQ9UIG0 1483 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms