RNA–Protein interactions for RNA: ENST00000554140.1

BEGAIN-204, Transcript of brain enriched guanylate kinase associated, humanhuman

APPRIS ALT2 TSL 5

Gene BEGAIN, Length 632 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEGAIN-204ENST00000554140 NISCHQ9Y2I1 1504 aa63.16■■■■■ 7.7
BEGAIN-204ENST00000554140 CCDC180Q9P1Z9 1646 aa56.33■■■■■ 6.61
BEGAIN-204ENST00000554140 ABCC9O60706 1549 aa55.52■■■■■ 6.48
BEGAIN-204ENST00000554140 RB1CC1Q8TDY2 1594 aa53.23■■■■■ 6.11
BEGAIN-204ENST00000554140 NACADO15069 1562 aa53.09■■■■■ 6.09
BEGAIN-204ENST00000554140 DCAF8L2P0C7V8 631 aa52.86■■■■■ 6.05
BEGAIN-204ENST00000554140 MYO15BQ96JP2 1530 aa52.68■■■■■ 6.02
BEGAIN-204ENST00000554140 ZCCHC6Q5VYS8 1495 aaKnown RBP52.53■■■■■ 6
BEGAIN-204ENST00000554140 DCAF1Q9Y4B6 1507 aa52.28■■■■■ 5.96
BEGAIN-204ENST00000554140 UNC13AQ9UPW8 1703 aa51.98■■■■■ 5.91
BEGAIN-204ENST00000554140 PABPN1Q86U42 306 aaKnown RBP eCLIP51.81■■■■■ 5.88
BEGAIN-204ENST00000554140 BICRAQ9NZM4 1560 aa51.67■■■■■ 5.86
BEGAIN-204ENST00000554140 DNAJC5BQ9UF47 199 aa51.43■■■■■ 5.82
BEGAIN-204ENST00000554140 SCRIBQ14160 1630 aa51.31■■■■■ 5.81
BEGAIN-204ENST00000554140 SHROOM4Q9ULL8 1493 aa51.12■■■■■ 5.77
BEGAIN-204ENST00000554140 EIF4G1Q04637 1599 aaKnown RBP50.32■■■■■ 5.65
BEGAIN-204ENST00000554140 CC2D2AQ9P2K1 1620 aa50.21■■■■■ 5.63
BEGAIN-204ENST00000554140 CECR2Q9BXF3 1484 aa49.96■■■■■ 5.59
BEGAIN-204ENST00000554140 SMARCA4P51532 1647 aa49.08■■■■■ 5.45
BEGAIN-204ENST00000554140 NCAPD3P42695 1498 aa49.03■■■■■ 5.44
BEGAIN-204ENST00000554140 BAZ1AQ9NRL2 1556 aaPredicted RBP48.97■■■■■ 5.43
BEGAIN-204ENST00000554140 ATAD2BQ9ULI0 1458 aa48.96■■■■■ 5.43
BEGAIN-204ENST00000554140 SMARCA2P51531 1590 aa48.86■■■■■ 5.41
BEGAIN-204ENST00000554140 HMGXB3Q12766 1538 aa48.72■■■■■ 5.39
BEGAIN-204ENST00000554140 MROH2BQ7Z745 1585 aa48.66■■■■■ 5.38
BEGAIN-204ENST00000554140 PEG3Q9GZU2 1588 aa48.66■■■■■ 5.38
BEGAIN-204ENST00000554140 BAZ1BQ9UIG0 1483 aaKnown RBP48.5■■■■■ 5.35
BEGAIN-204ENST00000554140 WIZO95785 1651 aa48.08■■■■■ 5.29
BEGAIN-204ENST00000554140 RSF1Q96T23 1441 aaPredicted RBP47.97■■■■■ 5.27
BEGAIN-204ENST00000554140 NESP48681 1621 aa47.93■■■■■ 5.26
BEGAIN-204ENST00000554140 ERCC6Q03468 1493 aa47.88■■■■■ 5.26
BEGAIN-204ENST00000554140 LAMC3Q9Y6N6 1575 aa47.75■■■■■ 5.24
BEGAIN-204ENST00000554140 CUX2O14529 1486 aa47.59■■■■■ 5.21
BEGAIN-204ENST00000554140 TOP2AP11388 1531 aaKnown RBP47.57■■■■■ 5.21
BEGAIN-204ENST00000554140 CADPSQ9ULU8 1353 aa47.55■■■■■ 5.2
BEGAIN-204ENST00000554140 PDS5BQ9NTI5 1447 aa47.46■■■■■ 5.19
BEGAIN-204ENST00000554140 THOC2Q8NI27 1593 aaKnown RBP47.31■■■■■ 5.16
BEGAIN-204ENST00000554140 KIF21AQ7Z4S6 1674 aa47.31■■■■■ 5.16
BEGAIN-204ENST00000554140 CFTRP13569 1480 aa47.19■■■■■ 5.14
BEGAIN-204ENST00000554140 CCDC88BA6NC98 1476 aa47.02■■■■■ 5.12
BEGAIN-204ENST00000554140 MRC2Q9UBG0 1479 aa47■■■■■ 5.11
BEGAIN-204ENST00000554140 FANCD2Q9BXW9 1451 aa46.98■■■■■ 5.11
BEGAIN-204ENST00000554140 CEP164Q9UPV0 1460 aa46.95■■■■■ 5.11
BEGAIN-204ENST00000554140 WDR62O43379 1518 aa46.86■■■■■ 5.09
BEGAIN-204ENST00000554140 PRDM2Q13029 1718 aa46.7■■■■■ 5.07
BEGAIN-204ENST00000554140 DNAJC5Q9H3Z4 198 aa46.68■■■■■ 5.06
BEGAIN-204ENST00000554140 URB2Q14146 1524 aaKnown RBP46.56■■■■■ 5.04
BEGAIN-204ENST00000554140 SUPT5HO00267 1087 aaKnown RBP46.33■■■■■ 5.01
BEGAIN-204ENST00000554140 TOPBP1Q92547 1522 aa46.19■■■■■ 4.99
BEGAIN-204ENST00000554140 ABCC8Q09428 1581 aa46.17■■■■■ 4.98
BEGAIN-204ENST00000554140 DNMBPQ6XZF7 1577 aa46.09■■■■■ 4.97
BEGAIN-204ENST00000554140 IFT140Q96RY7 1462 aa46.01■■■■■ 4.96
BEGAIN-204ENST00000554140 ZNF608Q9ULD9 1512 aaPredicted RBP45.84■■■■■ 4.93
BEGAIN-204ENST00000554140 POLA1P09884 1462 aaPredicted RBP45.77■■■■■ 4.92
BEGAIN-204ENST00000554140 TARBP1Q13395 1621 aaKnown RBP45.73■■■■■ 4.91
BEGAIN-204ENST00000554140 CUX1P39880 1505 aa45.67■■■■■ 4.9
BEGAIN-204ENST00000554140 EIF4G3O43432 1585 aaKnown RBP45.61■■■■■ 4.89
BEGAIN-204ENST00000554140 FGD5Q6ZNL6 1462 aa45.58■■■■■ 4.89
BEGAIN-204ENST00000554140 SOGA1O94964 1423 aa45.57■■■■■ 4.89
BEGAIN-204ENST00000554140 RAD54L2Q9Y4B4 1467 aa45.56■■■■■ 4.88
BEGAIN-204ENST00000554140 OSCARQ8IYS5 282 aa45.53■■■■■ 4.88
BEGAIN-204ENST00000554140 AQRO60306 1485 aaKnown RBP eCLIP45.52■■■■■ 4.88
BEGAIN-204ENST00000554140 TDRD9Q8NDG6 1382 aaKnown RBP45.36■■■■■ 4.85
BEGAIN-204ENST00000554140 WDR97A6NE52 1622 aa45.34■■■■■ 4.85
BEGAIN-204ENST00000554140 WRNQ14191 1432 aaPredicted RBP eCLIP45.21■■■■■ 4.83
BEGAIN-204ENST00000554140 TOP2BQ02880 1626 aa45.16■■■■■ 4.82
BEGAIN-204ENST00000554140 ABCA10Q8WWZ4 1543 aa45.15■■■■■ 4.82
BEGAIN-204ENST00000554140 BIVM-ERCC5R4GMW8 1640 aa45.15■■■■■ 4.82
BEGAIN-204ENST00000554140 SYNJ1O43426 1573 aa45.11■■■■■ 4.81
BEGAIN-204ENST00000554140 GRIN2BQ13224 1484 aa45.1■■■■■ 4.81
BEGAIN-204ENST00000554140 CHD1O14646 1710 aa45.09■■■■■ 4.81
BEGAIN-204ENST00000554140 SNAPC4Q5SXM2 1469 aa45.07■■■■■ 4.81
BEGAIN-204ENST00000554140 GAPVD1Q14C86 1478 aa45.03■■■■■ 4.8
BEGAIN-204ENST00000554140 MAGI1Q96QZ7 1491 aaPredicted RBP45.03■■■■■ 4.8
BEGAIN-204ENST00000554140 FBLN2P98095 1184 aa45.01■■■■■ 4.8
BEGAIN-204ENST00000554140 ABCA5Q8WWZ7 1642 aa44.98■■■■■ 4.79
BEGAIN-204ENST00000554140 PBRM1Q86U86 1689 aa44.9■■■■■ 4.78
BEGAIN-204ENST00000554140 SYNJ2O15056 1496 aa44.85■■■■■ 4.77
BEGAIN-204ENST00000554140 CHMP7Q8WUX9 453 aaPredicted RBP44.85■■■■■ 4.77
BEGAIN-204ENST00000554140 TRIM41Q8WV44 630 aa44.85■■■■■ 4.77
BEGAIN-204ENST00000554140 RIMBP3CA6NJZ7 1639 aa44.82■■■■■ 4.77
BEGAIN-204ENST00000554140 RIMBP3BA6NNM3 1639 aa44.82■■■■■ 4.77
BEGAIN-204ENST00000554140 RIMBP3Q9UFD9 1639 aa44.82■■■■■ 4.77
BEGAIN-204ENST00000554140 ARHGEF11O15085 1522 aa44.79■■■■■ 4.76
BEGAIN-204ENST00000554140 CLASP1Q7Z460 1538 aa44.66■■■■■ 4.74
BEGAIN-204ENST00000554140 ERICH3Q5RHP9 1530 aa44.59■■■■■ 4.73
BEGAIN-204ENST00000554140 ADAMTS12P58397 1594 aa44.57■■■■■ 4.73
BEGAIN-204ENST00000554140 FHAD1B1AJZ9 1412 aa44.51■■■■■ 4.72
BEGAIN-204ENST00000554140 GRIN2AQ12879 1464 aa44.51■■■■■ 4.72
BEGAIN-204ENST00000554140 ARAP1Q96P48 1450 aa44.4■■■■■ 4.7
BEGAIN-204ENST00000554140 CYB5RLQ6IPT4 315 aa44.38■■■■■ 4.7
BEGAIN-204ENST00000554140 NUP160Q12769 1436 aa44.36■■■■■ 4.69
BEGAIN-204ENST00000554140 KIF27Q86VH2 1401 aa44.3■■■■■ 4.68
BEGAIN-204ENST00000554140 CEP170Q5SW79 1584 aa44.3■■■■■ 4.68
BEGAIN-204ENST00000554140 IGF1RP08069 1367 aa44.22■■■■■ 4.67
BEGAIN-204ENST00000554140 CUL7Q14999 1698 aa44.06■■■■■ 4.64
BEGAIN-204ENST00000554140 SHROOM2Q13796 1616 aa44.06■■■■■ 4.64
BEGAIN-204ENST00000554140 ERCC6L2Q5T890 1561 aa43.99■■■■■ 4.63
BEGAIN-204ENST00000554140 RUSC2Q8N2Y8 1516 aa43.93■■■■■ 4.62
BEGAIN-204ENST00000554140 CARMIL1Q5VZK9 1371 aa43.92■■■■■ 4.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms