RNA–Protein interactions for RNA: ENST00000553996.2

AL137230.1-202, humanhuman

TSL 2 BASIC

Gene AL137230.1, Length 420 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL137230.1-202ENST00000553996 AEBP2Q6ZN18 517 aaPredicted RBP24.89■■□□□ 1.58
AL137230.1-202ENST00000553996 CHIC1Q5VXU3 224 aa23.13■■□□□ 1.29
AL137230.1-202ENST00000553996 SENP3Q9H4L4 574 aaPredicted RBP21.24■□□□□ 0.99
AL137230.1-202ENST00000553996 PHF23Q9BUL5 403 aaPredicted RBP20.9■□□□□ 0.94
AL137230.1-202ENST00000553996 FOXD1Q16676 465 aa19.98■□□□□ 0.79
AL137230.1-202ENST00000553996 POTEDQ86YR6 584 aa19.89■□□□□ 0.77
AL137230.1-202ENST00000553996 MSH5O43196 834 aa18.9■□□□□ 0.62
AL137230.1-202ENST00000553996 PIAS4Q8N2W9 510 aaPredicted RBP18.45■□□□□ 0.54
AL137230.1-202ENST00000553996 PPP6R1Q9UPN7 881 aa18.11■□□□□ 0.49
AL137230.1-202ENST00000553996 ADRA2BP18089 450 aa17.99■□□□□ 0.47
AL137230.1-202ENST00000553996 PLPPR3Q6T4P5 718 aa17.81■□□□□ 0.44
AL137230.1-202ENST00000553996 NISCHQ9Y2I1 1504 aa17.48■□□□□ 0.39
AL137230.1-202ENST00000553996 MAPK8IP2Q13387 824 aaPredicted RBP16.78■□□□□ 0.28
AL137230.1-202ENST00000553996 CACNB1Q02641 598 aaPredicted RBP16.75■□□□□ 0.27
AL137230.1-202ENST00000553996 DMRT2Q9Y5R5 561 aa16.75■□□□□ 0.27
AL137230.1-202ENST00000553996 SCAF1Q9H7N4 1312 aaKnown RBP16.31■□□□□ 0.2
AL137230.1-202ENST00000553996 DCAF8L1A6NGE4 600 aa16.14■□□□□ 0.17
AL137230.1-202ENST00000553996 RNF39Q9H2S5 420 aa16.1■□□□□ 0.17
AL137230.1-202ENST00000553996 CCDC180Q9P1Z9 1646 aa15.83■□□□□ 0.13
AL137230.1-202ENST00000553996 HOXD11P31277 338 aaPredicted RBP15.81■□□□□ 0.12
AL137230.1-202ENST00000553996 C1QBPQ07021 282 aaKnown RBP15.77■□□□□ 0.12
AL137230.1-202ENST00000553996 ABCC9O60706 1549 aa15.75■□□□□ 0.11
AL137230.1-202ENST00000553996 PPP4R3CPQ6ZMV5 832 aa15.55■□□□□ 0.08
AL137230.1-202ENST00000553996 RNF216Q9NWF9 866 aaPredicted RBP15.46■□□□□ 0.07
AL137230.1-202ENST00000553996 POTEHQ6S545 545 aa15.41■□□□□ 0.06
AL137230.1-202ENST00000553996 CNKSR2Q8WXI2 1034 aa15.4■□□□□ 0.06
AL137230.1-202ENST00000553996 DNAJC5BQ9UF47 199 aa15.33■□□□□ 0.04
AL137230.1-202ENST00000553996 RB1CC1Q8TDY2 1594 aa15.1■□□□□ 0.01
AL137230.1-202ENST00000553996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.07■□□□□ 0
AL137230.1-202ENST00000553996 NACADO15069 1562 aa14.98□□□□□ -0.01
AL137230.1-202ENST00000553996 DSG3P32926 999 aa14.83□□□□□ -0.04
AL137230.1-202ENST00000553996 MYO15BQ96JP2 1530 aa14.82□□□□□ -0.04
AL137230.1-202ENST00000553996 SPINK5Q9NQ38 1064 aaPredicted RBP14.76□□□□□ -0.05
AL137230.1-202ENST00000553996 CAPN15O75808 1086 aa14.73□□□□□ -0.05
AL137230.1-202ENST00000553996 U3KPZ7 1027 aaPredicted RBP14.71□□□□□ -0.05
AL137230.1-202ENST00000553996 SHROOM4Q9ULL8 1493 aa14.63□□□□□ -0.07
AL137230.1-202ENST00000553996 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
AL137230.1-202ENST00000553996 DCAF8L2P0C7V8 631 aa14.59□□□□□ -0.07
AL137230.1-202ENST00000553996 UNC13AQ9UPW8 1703 aa14.56□□□□□ -0.08
AL137230.1-202ENST00000553996 DCAF1Q9Y4B6 1507 aa14.56□□□□□ -0.08
AL137230.1-202ENST00000553996 PABPN1Q86U42 306 aaKnown RBP eCLIP14.55□□□□□ -0.08
AL137230.1-202ENST00000553996 BICRAQ9NZM4 1560 aa14.54□□□□□ -0.08
AL137230.1-202ENST00000553996 ZCCHC6Q5VYS8 1495 aaKnown RBP14.52□□□□□ -0.08
AL137230.1-202ENST00000553996 NPM3O75607 178 aaKnown RBP14.52□□□□□ -0.09
AL137230.1-202ENST00000553996 ABCB7O75027 752 aa14.36□□□□□ -0.11
AL137230.1-202ENST00000553996 TRHP20396 242 aaPredicted RBP14.31□□□□□ -0.12
AL137230.1-202ENST00000553996 SCRIBQ14160 1630 aa14.29□□□□□ -0.12
AL137230.1-202ENST00000553996 CECR2Q9BXF3 1484 aa14.27□□□□□ -0.12
AL137230.1-202ENST00000553996 CC2D2AQ9P2K1 1620 aa14.26□□□□□ -0.13
AL137230.1-202ENST00000553996 EIF4G1Q04637 1599 aaKnown RBP14.26□□□□□ -0.13
AL137230.1-202ENST00000553996 ZNF219Q9P2Y4 722 aaPredicted RBP14.18□□□□□ -0.14
AL137230.1-202ENST00000553996 CHRDL2Q6WN34 429 aa14.16□□□□□ -0.14
AL137230.1-202ENST00000553996 SLC4A2P04920 1241 aa14.1□□□□□ -0.15
AL137230.1-202ENST00000553996 RBM42Q9BTD8 480 aaKnown RBP14.09□□□□□ -0.15
AL137230.1-202ENST00000553996 APLP2Q06481 763 aa14.06□□□□□ -0.16
AL137230.1-202ENST00000553996 SP7Q8TDD2 431 aaPredicted RBP14.06□□□□□ -0.16
AL137230.1-202ENST00000553996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.88□□□□□ -0.19
AL137230.1-202ENST00000553996 HNRNPUL2Q1KMD3 747 aaKnown RBP13.88□□□□□ -0.19
AL137230.1-202ENST00000553996 SAMD1Q6SPF0 538 aaPredicted RBP13.8□□□□□ -0.2
AL137230.1-202ENST00000553996 CUX2O14529 1486 aa13.8□□□□□ -0.2
AL137230.1-202ENST00000553996 NCAPD3P42695 1498 aa13.78□□□□□ -0.2
AL137230.1-202ENST00000553996 SMARCA2P51531 1590 aa13.75□□□□□ -0.21
AL137230.1-202ENST00000553996 HMGXB3Q12766 1538 aa13.74□□□□□ -0.21
AL137230.1-202ENST00000553996 POLA2Q14181 598 aa13.73□□□□□ -0.21
AL137230.1-202ENST00000553996 DNAJC5Q9H3Z4 198 aa13.72□□□□□ -0.21
AL137230.1-202ENST00000553996 ERCC6Q03468 1493 aa13.72□□□□□ -0.21
AL137230.1-202ENST00000553996 ATAD2BQ9ULI0 1458 aa13.69□□□□□ -0.22
AL137230.1-202ENST00000553996 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
AL137230.1-202ENST00000553996 SMARCA4P51532 1647 aa13.67□□□□□ -0.22
AL137230.1-202ENST00000553996 BAZ1AQ9NRL2 1556 aaPredicted RBP13.65□□□□□ -0.22
AL137230.1-202ENST00000553996 HAX1O00165 279 aa13.62□□□□□ -0.23
AL137230.1-202ENST00000553996 AKT1S1Q96B36 256 aa13.62□□□□□ -0.23
AL137230.1-202ENST00000553996 PEG3Q9GZU2 1588 aa13.6□□□□□ -0.23
AL137230.1-202ENST00000553996 BAZ1BQ9UIG0 1483 aaKnown RBP13.6□□□□□ -0.23
AL137230.1-202ENST00000553996 KCNA4P22459 653 aa13.57□□□□□ -0.24
AL137230.1-202ENST00000553996 REM2Q8IYK8 340 aaPredicted RBP13.54□□□□□ -0.24
AL137230.1-202ENST00000553996 LAMC3Q9Y6N6 1575 aa13.54□□□□□ -0.24
AL137230.1-202ENST00000553996 EVX2Q03828 476 aa13.48□□□□□ -0.25
AL137230.1-202ENST00000553996 THOC2Q8NI27 1593 aaKnown RBP13.48□□□□□ -0.25
AL137230.1-202ENST00000553996 PDS5BQ9NTI5 1447 aa13.46□□□□□ -0.26
AL137230.1-202ENST00000553996 NESP48681 1621 aa13.46□□□□□ -0.26
AL137230.1-202ENST00000553996 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.26
AL137230.1-202ENST00000553996 PITPNM1O00562 1244 aa13.43□□□□□ -0.26
AL137230.1-202ENST00000553996 MYCNP04198 464 aaPredicted RBP13.4□□□□□ -0.26
AL137230.1-202ENST00000553996 MROH2BQ7Z745 1585 aa13.39□□□□□ -0.27
AL137230.1-202ENST00000553996 OSCARQ8IYS5 282 aa13.36□□□□□ -0.27
AL137230.1-202ENST00000553996 CADPSQ9ULU8 1353 aa13.33□□□□□ -0.27
AL137230.1-202ENST00000553996 MRC2Q9UBG0 1479 aa13.33□□□□□ -0.28
AL137230.1-202ENST00000553996 KIF21AQ7Z4S6 1674 aa13.32□□□□□ -0.28
AL137230.1-202ENST00000553996 WDR62O43379 1518 aa13.31□□□□□ -0.28
AL137230.1-202ENST00000553996 ZBTB12Q9Y330 459 aaPredicted RBP13.3□□□□□ -0.28
AL137230.1-202ENST00000553996 CEP164Q9UPV0 1460 aa13.26□□□□□ -0.29
AL137230.1-202ENST00000553996 ATF5Q9Y2D1 282 aaPredicted RBP13.26□□□□□ -0.29
AL137230.1-202ENST00000553996 WIZO95785 1651 aa13.2□□□□□ -0.3
AL137230.1-202ENST00000553996 FANCD2Q9BXW9 1451 aa13.19□□□□□ -0.3
AL137230.1-202ENST00000553996 CFTRP13569 1480 aa13.18□□□□□ -0.3
AL137230.1-202ENST00000553996 LHX8Q68G74 356 aa13.18□□□□□ -0.3
AL137230.1-202ENST00000553996 TOP2AP11388 1531 aaKnown RBP13.18□□□□□ -0.3
AL137230.1-202ENST00000553996 RSF1Q96T23 1441 aaPredicted RBP13.11□□□□□ -0.31
AL137230.1-202ENST00000553996 GABBR2O75899 941 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms