RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 NISCHQ9Y2I1 1504 aa34.87■■■■□ 3.17
PRKCH-207ENST00000553831 CCDC180Q9P1Z9 1646 aa31.05■■■□□ 2.56
PRKCH-207ENST00000553831 ABCC9O60706 1549 aa30.54■■■□□ 2.48
PRKCH-207ENST00000553831 RB1CC1Q8TDY2 1594 aa29.29■■■□□ 2.28
PRKCH-207ENST00000553831 NACADO15069 1562 aa29.22■■■□□ 2.27
PRKCH-207ENST00000553831 DCAF8L2P0C7V8 631 aa29.15■■■□□ 2.26
PRKCH-207ENST00000553831 ZCCHC6Q5VYS8 1495 aaKnown RBP29.04■■■□□ 2.24
PRKCH-207ENST00000553831 MYO15BQ96JP2 1530 aa28.99■■■□□ 2.23
PRKCH-207ENST00000553831 DCAF1Q9Y4B6 1507 aa28.83■■■□□ 2.21
PRKCH-207ENST00000553831 UNC13AQ9UPW8 1703 aa28.63■■■□□ 2.17
PRKCH-207ENST00000553831 PABPN1Q86U42 306 aaKnown RBP eCLIP28.5■■■□□ 2.15
PRKCH-207ENST00000553831 BICRAQ9NZM4 1560 aa28.44■■■□□ 2.14
PRKCH-207ENST00000553831 SCRIBQ14160 1630 aa28.36■■■□□ 2.13
PRKCH-207ENST00000553831 DNAJC5BQ9UF47 199 aa28.15■■■□□ 2.1
PRKCH-207ENST00000553831 SHROOM4Q9ULL8 1493 aa28.1■■■□□ 2.09
PRKCH-207ENST00000553831 EIF4G1Q04637 1599 aaKnown RBP27.69■■■□□ 2.02
PRKCH-207ENST00000553831 CC2D2AQ9P2K1 1620 aa27.61■■■□□ 2.01
PRKCH-207ENST00000553831 CECR2Q9BXF3 1484 aa27.45■■□□□ 1.99
PRKCH-207ENST00000553831 SMARCA4P51532 1647 aa27.09■■□□□ 1.93
PRKCH-207ENST00000553831 BAZ1AQ9NRL2 1556 aaPredicted RBP27.02■■□□□ 1.92
PRKCH-207ENST00000553831 ATAD2BQ9ULI0 1458 aa26.98■■□□□ 1.91
PRKCH-207ENST00000553831 NCAPD3P42695 1498 aa26.97■■□□□ 1.91
PRKCH-207ENST00000553831 SMARCA2P51531 1590 aa26.93■■□□□ 1.9
PRKCH-207ENST00000553831 MROH2BQ7Z745 1585 aa26.88■■□□□ 1.89
PRKCH-207ENST00000553831 HMGXB3Q12766 1538 aa26.84■■□□□ 1.89
PRKCH-207ENST00000553831 PEG3Q9GZU2 1588 aa26.82■■□□□ 1.88
PRKCH-207ENST00000553831 BAZ1BQ9UIG0 1483 aaKnown RBP26.74■■□□□ 1.87
PRKCH-207ENST00000553831 WIZO95785 1651 aa26.57■■□□□ 1.84
PRKCH-207ENST00000553831 RSF1Q96T23 1441 aaPredicted RBP26.52■■□□□ 1.84
PRKCH-207ENST00000553831 NESP48681 1621 aa26.39■■□□□ 1.82
PRKCH-207ENST00000553831 ERCC6Q03468 1493 aa26.33■■□□□ 1.81
PRKCH-207ENST00000553831 TOP2AP11388 1531 aaKnown RBP26.29■■□□□ 1.8
PRKCH-207ENST00000553831 LAMC3Q9Y6N6 1575 aa26.28■■□□□ 1.8
PRKCH-207ENST00000553831 CADPSQ9ULU8 1353 aa26.18■■□□□ 1.78
PRKCH-207ENST00000553831 PDS5BQ9NTI5 1447 aa26.1■■□□□ 1.77
PRKCH-207ENST00000553831 CUX2O14529 1486 aa26.09■■□□□ 1.77
PRKCH-207ENST00000553831 KIF21AQ7Z4S6 1674 aa26.06■■□□□ 1.76
PRKCH-207ENST00000553831 THOC2Q8NI27 1593 aaKnown RBP26.03■■□□□ 1.76
PRKCH-207ENST00000553831 CFTRP13569 1480 aa26■■□□□ 1.75
PRKCH-207ENST00000553831 CCDC88BA6NC98 1476 aa25.97■■□□□ 1.75
PRKCH-207ENST00000553831 FANCD2Q9BXW9 1451 aa25.89■■□□□ 1.73
PRKCH-207ENST00000553831 CEP164Q9UPV0 1460 aa25.88■■□□□ 1.73
PRKCH-207ENST00000553831 MRC2Q9UBG0 1479 aa25.87■■□□□ 1.73
PRKCH-207ENST00000553831 WDR62O43379 1518 aa25.79■■□□□ 1.72
PRKCH-207ENST00000553831 PRDM2Q13029 1718 aa25.77■■□□□ 1.72
PRKCH-207ENST00000553831 SUPT5HO00267 1087 aaKnown RBP25.72■■□□□ 1.71
PRKCH-207ENST00000553831 URB2Q14146 1524 aaKnown RBP25.65■■□□□ 1.7
PRKCH-207ENST00000553831 TOPBP1Q92547 1522 aa25.47■■□□□ 1.67
PRKCH-207ENST00000553831 DNAJC5Q9H3Z4 198 aa25.43■■□□□ 1.66
PRKCH-207ENST00000553831 DNMBPQ6XZF7 1577 aa25.42■■□□□ 1.66
PRKCH-207ENST00000553831 ABCC8Q09428 1581 aa25.41■■□□□ 1.66
PRKCH-207ENST00000553831 IFT140Q96RY7 1462 aa25.33■■□□□ 1.65
PRKCH-207ENST00000553831 POLA1P09884 1462 aaPredicted RBP25.25■■□□□ 1.63
PRKCH-207ENST00000553831 ZNF608Q9ULD9 1512 aaPredicted RBP25.25■■□□□ 1.63
PRKCH-207ENST00000553831 CUX1P39880 1505 aa25.23■■□□□ 1.63
PRKCH-207ENST00000553831 TARBP1Q13395 1621 aaKnown RBP25.19■■□□□ 1.62
PRKCH-207ENST00000553831 FGD5Q6ZNL6 1462 aa25.16■■□□□ 1.62
PRKCH-207ENST00000553831 EIF4G3O43432 1585 aaKnown RBP25.14■■□□□ 1.62
PRKCH-207ENST00000553831 RAD54L2Q9Y4B4 1467 aa25.14■■□□□ 1.61
PRKCH-207ENST00000553831 SOGA1O94964 1423 aa25.11■■□□□ 1.61
PRKCH-207ENST00000553831 AQRO60306 1485 aaKnown RBP eCLIP25.08■■□□□ 1.6
PRKCH-207ENST00000553831 TDRD9Q8NDG6 1382 aaKnown RBP25■■□□□ 1.59
PRKCH-207ENST00000553831 WRNQ14191 1432 aaPredicted RBP eCLIP25■■□□□ 1.59
PRKCH-207ENST00000553831 WDR97A6NE52 1622 aa24.97■■□□□ 1.59
PRKCH-207ENST00000553831 SYNJ1O43426 1573 aa24.97■■□□□ 1.59
PRKCH-207ENST00000553831 TOP2BQ02880 1626 aa24.96■■□□□ 1.59
PRKCH-207ENST00000553831 BIVM-ERCC5R4GMW8 1640 aa24.96■■□□□ 1.59
PRKCH-207ENST00000553831 OSCARQ8IYS5 282 aa24.95■■□□□ 1.58
PRKCH-207ENST00000553831 ABCA10Q8WWZ4 1543 aa24.91■■□□□ 1.58
PRKCH-207ENST00000553831 SNAPC4Q5SXM2 1469 aa24.86■■□□□ 1.57
PRKCH-207ENST00000553831 GRIN2BQ13224 1484 aa24.85■■□□□ 1.57
PRKCH-207ENST00000553831 CHD1O14646 1710 aa24.83■■□□□ 1.57
PRKCH-207ENST00000553831 GAPVD1Q14C86 1478 aa24.83■■□□□ 1.56
PRKCH-207ENST00000553831 ABCA5Q8WWZ7 1642 aa24.83■■□□□ 1.56
PRKCH-207ENST00000553831 MAGI1Q96QZ7 1491 aaPredicted RBP24.8■■□□□ 1.56
PRKCH-207ENST00000553831 PBRM1Q86U86 1689 aa24.79■■□□□ 1.56
PRKCH-207ENST00000553831 FBLN2P98095 1184 aa24.78■■□□□ 1.56
PRKCH-207ENST00000553831 SYNJ2O15056 1496 aa24.7■■□□□ 1.55
PRKCH-207ENST00000553831 CHMP7Q8WUX9 453 aaPredicted RBP24.68■■□□□ 1.54
PRKCH-207ENST00000553831 ADAMTS12P58397 1594 aa24.62■■□□□ 1.53
PRKCH-207ENST00000553831 RIMBP3CA6NJZ7 1639 aa24.61■■□□□ 1.53
PRKCH-207ENST00000553831 RIMBP3BA6NNM3 1639 aa24.61■■□□□ 1.53
PRKCH-207ENST00000553831 RIMBP3Q9UFD9 1639 aa24.61■■□□□ 1.53
PRKCH-207ENST00000553831 ARHGEF11O15085 1522 aa24.6■■□□□ 1.53
PRKCH-207ENST00000553831 ERICH3Q5RHP9 1530 aa24.6■■□□□ 1.53
PRKCH-207ENST00000553831 CLASP1Q7Z460 1538 aa24.58■■□□□ 1.53
PRKCH-207ENST00000553831 TRIM41Q8WV44 630 aa24.56■■□□□ 1.52
PRKCH-207ENST00000553831 FHAD1B1AJZ9 1412 aa24.53■■□□□ 1.52
PRKCH-207ENST00000553831 GRIN2AQ12879 1464 aa24.53■■□□□ 1.52
PRKCH-207ENST00000553831 KIF27Q86VH2 1401 aa24.48■■□□□ 1.51
PRKCH-207ENST00000553831 NUP160Q12769 1436 aa24.44■■□□□ 1.5
PRKCH-207ENST00000553831 CEP170Q5SW79 1584 aa24.43■■□□□ 1.5
PRKCH-207ENST00000553831 ARAP1Q96P48 1450 aa24.41■■□□□ 1.5
PRKCH-207ENST00000553831 IGF1RP08069 1367 aa24.4■■□□□ 1.5
PRKCH-207ENST00000553831 CUL7Q14999 1698 aa24.34■■□□□ 1.49
PRKCH-207ENST00000553831 CYB5RLQ6IPT4 315 aa24.34■■□□□ 1.49
PRKCH-207ENST00000553831 SHROOM2Q13796 1616 aa24.26■■□□□ 1.47
PRKCH-207ENST00000553831 RUSC2Q8N2Y8 1516 aa24.25■■□□□ 1.47
PRKCH-207ENST00000553831 CARMIL1Q5VZK9 1371 aa24.25■■□□□ 1.47
PRKCH-207ENST00000553831 ERCC6L2Q5T890 1561 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms