RNA–Protein interactions for RNA: ENST00000553772.5

COCH-206, Transcript of cochlin, humanhuman

TSL 4

Gene COCH, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-206ENST00000553772 NISCHQ9Y2I1 1504 aa48.09■■■■■ 5.29
COCH-206ENST00000553772 CCDC180Q9P1Z9 1646 aa42.69■■■■■ 4.42
COCH-206ENST00000553772 ABCC9O60706 1549 aa41.38■■■■■ 4.21
COCH-206ENST00000553772 ZCCHC6Q5VYS8 1495 aaKnown RBP40.13■■■■■ 4.01
COCH-206ENST00000553772 NACADO15069 1562 aa40.06■■■■■ 4
COCH-206ENST00000553772 RB1CC1Q8TDY2 1594 aa40.01■■■■■ 4
COCH-206ENST00000553772 MYO15BQ96JP2 1530 aa39.97■■■■□ 3.99
COCH-206ENST00000553772 DCAF8L2P0C7V8 631 aa39.92■■■■□ 3.98
COCH-206ENST00000553772 DCAF1Q9Y4B6 1507 aa39.88■■■■□ 3.97
COCH-206ENST00000553772 UNC13AQ9UPW8 1703 aa39.12■■■■□ 3.85
COCH-206ENST00000553772 SCRIBQ14160 1630 aa38.85■■■■□ 3.81
COCH-206ENST00000553772 BICRAQ9NZM4 1560 aa38.78■■■■□ 3.8
COCH-206ENST00000553772 PABPN1Q86U42 306 aaKnown RBP eCLIP38.67■■■■□ 3.78
COCH-206ENST00000553772 SHROOM4Q9ULL8 1493 aa38.49■■■■□ 3.75
COCH-206ENST00000553772 EIF4G1Q04637 1599 aaKnown RBP37.73■■■■□ 3.63
COCH-206ENST00000553772 DNAJC5BQ9UF47 199 aa37.72■■■■□ 3.63
COCH-206ENST00000553772 CC2D2AQ9P2K1 1620 aa37.5■■■■□ 3.59
COCH-206ENST00000553772 CECR2Q9BXF3 1484 aa37.38■■■■□ 3.57
COCH-206ENST00000553772 BAZ1AQ9NRL2 1556 aaPredicted RBP37.27■■■■□ 3.56
COCH-206ENST00000553772 SMARCA4P51532 1647 aa37.25■■■■□ 3.55
COCH-206ENST00000553772 MROH2BQ7Z745 1585 aa37.03■■■■□ 3.52
COCH-206ENST00000553772 ATAD2BQ9ULI0 1458 aa36.98■■■■□ 3.51
COCH-206ENST00000553772 SMARCA2P51531 1590 aa36.98■■■■□ 3.51
COCH-206ENST00000553772 NCAPD3P42695 1498 aa36.95■■■■□ 3.51
COCH-206ENST00000553772 PEG3Q9GZU2 1588 aa36.95■■■■□ 3.51
COCH-206ENST00000553772 HMGXB3Q12766 1538 aa36.8■■■■□ 3.48
COCH-206ENST00000553772 RSF1Q96T23 1441 aaPredicted RBP36.72■■■■□ 3.47
COCH-206ENST00000553772 BAZ1BQ9UIG0 1483 aaKnown RBP36.68■■■■□ 3.46
COCH-206ENST00000553772 WIZO95785 1651 aa36.64■■■■□ 3.46
COCH-206ENST00000553772 TOP2AP11388 1531 aaKnown RBP36.31■■■■□ 3.4
COCH-206ENST00000553772 LAMC3Q9Y6N6 1575 aa35.94■■■■□ 3.34
COCH-206ENST00000553772 NESP48681 1621 aa35.89■■■■□ 3.34
COCH-206ENST00000553772 SUPT5HO00267 1087 aaKnown RBP35.88■■■■□ 3.33
COCH-206ENST00000553772 CADPSQ9ULU8 1353 aa35.87■■■■□ 3.33
COCH-206ENST00000553772 CCDC88BA6NC98 1476 aa35.85■■■■□ 3.33
COCH-206ENST00000553772 CFTRP13569 1480 aa35.72■■■■□ 3.31
COCH-206ENST00000553772 ERCC6Q03468 1493 aa35.67■■■■□ 3.3
COCH-206ENST00000553772 PDS5BQ9NTI5 1447 aa35.66■■■■□ 3.3
COCH-206ENST00000553772 PRDM2Q13029 1718 aa35.53■■■■□ 3.28
COCH-206ENST00000553772 KIF21AQ7Z4S6 1674 aa35.52■■■■□ 3.28
COCH-206ENST00000553772 FANCD2Q9BXW9 1451 aa35.43■■■■□ 3.26
COCH-206ENST00000553772 CEP164Q9UPV0 1460 aa35.37■■■■□ 3.25
COCH-206ENST00000553772 THOC2Q8NI27 1593 aaKnown RBP35.35■■■■□ 3.25
COCH-206ENST00000553772 CUX2O14529 1486 aa35.27■■■■□ 3.24
COCH-206ENST00000553772 MRC2Q9UBG0 1479 aa35.27■■■■□ 3.24
COCH-206ENST00000553772 WDR62O43379 1518 aa35.16■■■■□ 3.22
COCH-206ENST00000553772 URB2Q14146 1524 aaKnown RBP35.05■■■■□ 3.2
COCH-206ENST00000553772 ABCC8Q09428 1581 aa34.98■■■■□ 3.19
COCH-206ENST00000553772 DNMBPQ6XZF7 1577 aa34.91■■■■□ 3.18
COCH-206ENST00000553772 TOPBP1Q92547 1522 aa34.91■■■■□ 3.18
COCH-206ENST00000553772 CUX1P39880 1505 aa34.73■■■■□ 3.15
COCH-206ENST00000553772 IFT140Q96RY7 1462 aa34.64■■■■□ 3.14
COCH-206ENST00000553772 POLA1P09884 1462 aaPredicted RBP34.62■■■■□ 3.13
COCH-206ENST00000553772 WRNQ14191 1432 aaPredicted RBP eCLIP34.62■■■■□ 3.13
COCH-206ENST00000553772 FGD5Q6ZNL6 1462 aa34.56■■■■□ 3.12
COCH-206ENST00000553772 BIVM-ERCC5R4GMW8 1640 aa34.55■■■■□ 3.12
COCH-206ENST00000553772 TOP2BQ02880 1626 aa34.54■■■■□ 3.12
COCH-206ENST00000553772 TARBP1Q13395 1621 aaKnown RBP34.52■■■■□ 3.12
COCH-206ENST00000553772 SYNJ1O43426 1573 aa34.49■■■■□ 3.11
COCH-206ENST00000553772 SOGA1O94964 1423 aa34.47■■■■□ 3.11
COCH-206ENST00000553772 RAD54L2Q9Y4B4 1467 aa34.42■■■■□ 3.1
COCH-206ENST00000553772 ZNF608Q9ULD9 1512 aaPredicted RBP34.4■■■■□ 3.1
COCH-206ENST00000553772 WDR97A6NE52 1622 aa34.34■■■■□ 3.09
COCH-206ENST00000553772 EIF4G3O43432 1585 aaKnown RBP34.31■■■■□ 3.08
COCH-206ENST00000553772 ABCA10Q8WWZ4 1543 aa34.29■■■■□ 3.08
COCH-206ENST00000553772 AQRO60306 1485 aaKnown RBP eCLIP34.24■■■■□ 3.071e-11■■□□□ 14
COCH-206ENST00000553772 TDRD9Q8NDG6 1382 aaKnown RBP34.21■■■■□ 3.07
COCH-206ENST00000553772 ABCA5Q8WWZ7 1642 aa34.12■■■■□ 3.05
COCH-206ENST00000553772 GAPVD1Q14C86 1478 aa34.09■■■■□ 3.05
COCH-206ENST00000553772 GRIN2BQ13224 1484 aa34.06■■■■□ 3.04
COCH-206ENST00000553772 PBRM1Q86U86 1689 aa34.02■■■■□ 3.04
COCH-206ENST00000553772 MAGI1Q96QZ7 1491 aaPredicted RBP33.97■■■■□ 3.03
COCH-206ENST00000553772 TRIM41Q8WV44 630 aa33.94■■■■□ 3.02
COCH-206ENST00000553772 SNAPC4Q5SXM2 1469 aa33.94■■■■□ 3.02
COCH-206ENST00000553772 ERICH3Q5RHP9 1530 aa33.89■■■■□ 3.02
COCH-206ENST00000553772 KIF27Q86VH2 1401 aa33.88■■■■□ 3.01
COCH-206ENST00000553772 CHD1O14646 1710 aa33.83■■■■□ 3.01
COCH-206ENST00000553772 DNAJC5Q9H3Z4 198 aa33.82■■■■□ 3
COCH-206ENST00000553772 SYNJ2O15056 1496 aa33.82■■■■□ 3
COCH-206ENST00000553772 OSCARQ8IYS5 282 aa33.81■■■■□ 3
COCH-206ENST00000553772 ADAMTS12P58397 1594 aa33.76■■■□□ 2.99
COCH-206ENST00000553772 CHMP7Q8WUX9 453 aaPredicted RBP33.73■■■□□ 2.99
COCH-206ENST00000553772 FHAD1B1AJZ9 1412 aa33.72■■■□□ 2.99
COCH-206ENST00000553772 FBLN2P98095 1184 aa33.72■■■□□ 2.99
COCH-206ENST00000553772 CHIC1Q5VXU3 224 aa33.71■■■□□ 2.99
COCH-206ENST00000553772 IGF1RP08069 1367 aa33.71■■■□□ 2.99
COCH-206ENST00000553772 CUL7Q14999 1698 aa33.64■■■□□ 2.98
COCH-206ENST00000553772 GRIN2AQ12879 1464 aa33.62■■■□□ 2.97
COCH-206ENST00000553772 RUSC2Q8N2Y8 1516 aa33.58■■■□□ 2.97
COCH-206ENST00000553772 CARMIL1Q5VZK9 1371 aa33.5■■■□□ 2.95
COCH-206ENST00000553772 CLASP1Q7Z460 1538 aa33.48■■■□□ 2.95
COCH-206ENST00000553772 NUP160Q12769 1436 aa33.48■■■□□ 2.95
COCH-206ENST00000553772 EEA1Q15075 1411 aa33.45■■■□□ 2.95
COCH-206ENST00000553772 CEP170Q5SW79 1584 aa33.43■■■□□ 2.94
COCH-206ENST00000553772 RAPGEF2Q9Y4G8 1499 aa33.35■■■□□ 2.93
COCH-206ENST00000553772 PRXQ9BXM0 1461 aa33.31■■■□□ 2.92
COCH-206ENST00000553772 CSRNP3Q8WYN3 585 aa33.31■■■□□ 2.92
COCH-206ENST00000553772 ARHGEF11O15085 1522 aa33.26■■■□□ 2.91
COCH-206ENST00000553772 RIMBP3CA6NJZ7 1639 aa33.23■■■□□ 2.91
COCH-206ENST00000553772 RIMBP3BA6NNM3 1639 aa33.23■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms