RNA–Protein interactions for RNA: ENST00000553543.2

AL110118.1-201, humanhuman

BASIC

Gene AL110118.1, Length 400 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL110118.1-201ENST00000553543 DNAJC5BQ9UF47 199 aa11.77□□□□□ -0.53
AL110118.1-201ENST00000553543 NISCHQ9Y2I1 1504 aa11.7□□□□□ -0.54
AL110118.1-201ENST00000553543 DNAJC5Q9H3Z4 198 aa11.6□□□□□ -0.55
AL110118.1-201ENST00000553543 ABCC9O60706 1549 aa11.51□□□□□ -0.57
AL110118.1-201ENST00000553543 TRIM41Q8WV44 630 aa10.64□□□□□ -0.71
AL110118.1-201ENST00000553543 PABPN1Q86U42 306 aaKnown RBP eCLIP10.63□□□□□ -0.71
AL110118.1-201ENST00000553543 CCDC180Q9P1Z9 1646 aa10.53□□□□□ -0.72
AL110118.1-201ENST00000553543 CECR2Q9BXF3 1484 aa10.51□□□□□ -0.73
AL110118.1-201ENST00000553543 RB1CC1Q8TDY2 1594 aa10.48□□□□□ -0.73
AL110118.1-201ENST00000553543 CUX2O14529 1486 aa10.37□□□□□ -0.75
AL110118.1-201ENST00000553543 AEBP2Q6ZN18 517 aaPredicted RBP10.35□□□□□ -0.75
AL110118.1-201ENST00000553543 CC2D2AQ9P2K1 1620 aa10.29□□□□□ -0.76
AL110118.1-201ENST00000553543 NACADO15069 1562 aa10.19□□□□□ -0.78
AL110118.1-201ENST00000553543 BICRAQ9NZM4 1560 aa10.18□□□□□ -0.78
AL110118.1-201ENST00000553543 ILDR1Q86SU0 546 aaPredicted RBP10.1□□□□□ -0.79
AL110118.1-201ENST00000553543 ERCC6Q03468 1493 aa10.05□□□□□ -0.8
AL110118.1-201ENST00000553543 UNC13AQ9UPW8 1703 aa10.04□□□□□ -0.8
AL110118.1-201ENST00000553543 EIF4G1Q04637 1599 aaKnown RBP10.04□□□□□ -0.8
AL110118.1-201ENST00000553543 SHROOM4Q9ULL8 1493 aa10.04□□□□□ -0.8
AL110118.1-201ENST00000553543 DCAF8L2P0C7V8 631 aa10.03□□□□□ -0.8
AL110118.1-201ENST00000553543 TRHP20396 242 aaPredicted RBP9.86□□□□□ -0.83
AL110118.1-201ENST00000553543 OSCARQ8IYS5 282 aa9.81□□□□□ -0.84
AL110118.1-201ENST00000553543 ZCCHC6Q5VYS8 1495 aaKnown RBP9.8□□□□□ -0.84
AL110118.1-201ENST00000553543 MYO15BQ96JP2 1530 aa9.8□□□□□ -0.84
AL110118.1-201ENST00000553543 DCAF1Q9Y4B6 1507 aa9.76□□□□□ -0.85
AL110118.1-201ENST00000553543 CYB5RLQ6IPT4 315 aa9.63□□□□□ -0.87
AL110118.1-201ENST00000553543 RIMBP3CA6NJZ7 1639 aa9.62□□□□□ -0.87
AL110118.1-201ENST00000553543 RIMBP3BA6NNM3 1639 aa9.62□□□□□ -0.87
AL110118.1-201ENST00000553543 RIMBP3Q9UFD9 1639 aa9.62□□□□□ -0.87
AL110118.1-201ENST00000553543 THOC2Q8NI27 1593 aaKnown RBP9.62□□□□□ -0.87
AL110118.1-201ENST00000553543 NESP48681 1621 aa9.58□□□□□ -0.88
AL110118.1-201ENST00000553543 SCRIBQ14160 1630 aa9.58□□□□□ -0.88
AL110118.1-201ENST00000553543 BAZ1AQ9NRL2 1556 aaPredicted RBP9.58□□□□□ -0.88
AL110118.1-201ENST00000553543 ARHGEF11O15085 1522 aa9.54□□□□□ -0.88
AL110118.1-201ENST00000553543 SOCS7O14512 581 aa9.52□□□□□ -0.89
AL110118.1-201ENST00000553543 LMTK3Q96Q04 1460 aa9.49□□□□□ -0.89
AL110118.1-201ENST00000553543 SMARCA2P51531 1590 aa9.49□□□□□ -0.89
AL110118.1-201ENST00000553543 NCAPD3P42695 1498 aa9.47□□□□□ -0.89
AL110118.1-201ENST00000553543 FBXO41Q8TF61 875 aa9.46□□□□□ -0.9
AL110118.1-201ENST00000553543 PDS5BQ9NTI5 1447 aa9.42□□□□□ -0.9
AL110118.1-201ENST00000553543 ARAP1Q96P48 1450 aa9.39□□□□□ -0.91
AL110118.1-201ENST00000553543 MRC2Q9UBG0 1479 aa9.35□□□□□ -0.91
AL110118.1-201ENST00000553543 KDM4FA0A1W2PPD8 638 aa9.35□□□□□ -0.91
AL110118.1-201ENST00000553543 ILDR2Q71H61 639 aa9.35□□□□□ -0.91
AL110118.1-201ENST00000553543 LAMC3Q9Y6N6 1575 aa9.34□□□□□ -0.91
AL110118.1-201ENST00000553543 WDR62O43379 1518 aa9.31□□□□□ -0.92
AL110118.1-201ENST00000553543 KIF21AQ7Z4S6 1674 aa9.29□□□□□ -0.92
AL110118.1-201ENST00000553543 ATAD2BQ9ULI0 1458 aa9.28□□□□□ -0.92
AL110118.1-201ENST00000553543 ERCC6L2Q5T890 1561 aa9.26□□□□□ -0.93
AL110118.1-201ENST00000553543 HMGXB3Q12766 1538 aa9.24□□□□□ -0.93
AL110118.1-201ENST00000553543 DISP3Q9P2K9 1392 aa9.24□□□□□ -0.93
AL110118.1-201ENST00000553543 RSF1Q96T23 1441 aaPredicted RBP9.22□□□□□ -0.93
AL110118.1-201ENST00000553543 CADPSQ9ULU8 1353 aa9.16□□□□□ -0.94
AL110118.1-201ENST00000553543 SMARCA4P51532 1647 aa9.13□□□□□ -0.95
AL110118.1-201ENST00000553543 HECW2Q9P2P5 1572 aa9.12□□□□□ -0.95
AL110118.1-201ENST00000553543 BAZ1BQ9UIG0 1483 aaKnown RBP9.12□□□□□ -0.95
AL110118.1-201ENST00000553543 CEP164Q9UPV0 1460 aa9.1□□□□□ -0.95
AL110118.1-201ENST00000553543 CHIC1Q5VXU3 224 aa9.1□□□□□ -0.95
AL110118.1-201ENST00000553543 SYNJ2O15056 1496 aa9.09□□□□□ -0.95
AL110118.1-201ENST00000553543 PEG3Q9GZU2 1588 aa9.07□□□□□ -0.96
AL110118.1-201ENST00000553543 FBLN2P98095 1184 aa9.06□□□□□ -0.96
AL110118.1-201ENST00000553543 ZNF608Q9ULD9 1512 aaPredicted RBP9.04□□□□□ -0.96
AL110118.1-201ENST00000553543 FANCD2Q9BXW9 1451 aa9.01□□□□□ -0.97
AL110118.1-201ENST00000553543 MROH2BQ7Z745 1585 aa9□□□□□ -0.97
AL110118.1-201ENST00000553543 IFT140Q96RY7 1462 aa8.99□□□□□ -0.97
AL110118.1-201ENST00000553543 URB2Q14146 1524 aaKnown RBP8.97□□□□□ -0.97
AL110118.1-201ENST00000553543 ADGRL1O94910 1474 aa8.96□□□□□ -0.97
AL110118.1-201ENST00000553543 GAPVD1Q14C86 1478 aa8.96□□□□□ -0.98
AL110118.1-201ENST00000553543 WIZO95785 1651 aa8.94□□□□□ -0.98
AL110118.1-201ENST00000553543 FAM69CQ0P6D2 419 aa8.92□□□□□ -0.98
AL110118.1-201ENST00000553543 CHD1O14646 1710 aa8.91□□□□□ -0.98
AL110118.1-201ENST00000553543 SPATA31D1Q6ZQQ2 1576 aa8.91□□□□□ -0.98
AL110118.1-201ENST00000553543 CLASP1Q7Z460 1538 aa8.9□□□□□ -0.99
AL110118.1-201ENST00000553543 KDM6BO15054 1643 aa8.87□□□□□ -0.99
AL110118.1-201ENST00000553543 TOP2AP11388 1531 aaKnown RBP8.87□□□□□ -0.99
AL110118.1-201ENST00000553543 AQRO60306 1485 aaKnown RBP eCLIP8.86□□□□□ -0.99
AL110118.1-201ENST00000553543 CERKQ8TCT0 537 aa8.86□□□□□ -0.99
AL110118.1-201ENST00000553543 EIF4G3O43432 1585 aaKnown RBP8.86□□□□□ -0.99
AL110118.1-201ENST00000553543 CHMP7Q8WUX9 453 aaPredicted RBP8.84□□□□□ -0.99
AL110118.1-201ENST00000553543 KIF13AQ9H1H9 1805 aa8.83□□□□□ -1
AL110118.1-201ENST00000553543 PRDM2Q13029 1718 aa8.82□□□□□ -1
AL110118.1-201ENST00000553543 ABCC10Q5T3U5 1492 aa8.82□□□□□ -1
AL110118.1-201ENST00000553543 SYNJ1O43426 1573 aa8.82□□□□□ -1
AL110118.1-201ENST00000553543 CFTRP13569 1480 aa8.81□□□□□ -1
AL110118.1-201ENST00000553543 NPM1P06748 294 aaKnown RBP eCLIP8.73□□□□□ -1.01
AL110118.1-201ENST00000553543 SNAPC4Q5SXM2 1469 aa8.71□□□□□ -1.01
AL110118.1-201ENST00000553543 TOPBP1Q92547 1522 aa8.7□□□□□ -1.02
AL110118.1-201ENST00000553543 TOP2BQ02880 1626 aa8.69□□□□□ -1.02
AL110118.1-201ENST00000553543 CCDC88BA6NC98 1476 aa8.68□□□□□ -1.02
AL110118.1-201ENST00000553543 DIP2BQ9P265 1576 aa8.68□□□□□ -1.02
AL110118.1-201ENST00000553543 TDRD9Q8NDG6 1382 aaKnown RBP8.67□□□□□ -1.02
AL110118.1-201ENST00000553543 ABCC8Q09428 1581 aa8.66□□□□□ -1.02
AL110118.1-201ENST00000553543 MAGI1Q96QZ7 1491 aaPredicted RBP8.66□□□□□ -1.02
AL110118.1-201ENST00000553543 MAPKBP1O60336 1514 aa8.65□□□□□ -1.02
AL110118.1-201ENST00000553543 TARBP1Q13395 1621 aaKnown RBP8.64□□□□□ -1.03
AL110118.1-201ENST00000553543 PCF11O94913 1555 aaKnown RBP8.59□□□□□ -1.03
AL110118.1-201ENST00000553543 TSPOAP1O95153 1857 aa8.59□□□□□ -1.03
AL110118.1-201ENST00000553543 COL17A1Q9UMD9 1497 aaPredicted RBP8.58□□□□□ -1.04
AL110118.1-201ENST00000553543 GRIN2BQ13224 1484 aa8.57□□□□□ -1.04
AL110118.1-201ENST00000553543 CEP170Q5SW79 1584 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 718.8 ms