RNA–Protein interactions for RNA: ENST00000553336.5

NGDN-203, Transcript of neuroguidin, humanhuman

TSL 3

Gene NGDN, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGDN-203ENST00000553336 NISCHQ9Y2I1 1504 aa42.11■■■■■ 4.33
NGDN-203ENST00000553336 CCDC180Q9P1Z9 1646 aa37.67■■■■□ 3.62
NGDN-203ENST00000553336 ABCC9O60706 1549 aa37.63■■■■□ 3.61
NGDN-203ENST00000553336 RB1CC1Q8TDY2 1594 aa35.85■■■■□ 3.33
NGDN-203ENST00000553336 NACADO15069 1562 aa35.64■■■■□ 3.3
NGDN-203ENST00000553336 DCAF8L2P0C7V8 631 aa35.56■■■■□ 3.28
NGDN-203ENST00000553336 DNAJC5BQ9UF47 199 aa35.25■■■■□ 3.23
NGDN-203ENST00000553336 MYO15BQ96JP2 1530 aa35.21■■■■□ 3.23
NGDN-203ENST00000553336 PABPN1Q86U42 306 aaKnown RBP eCLIP35.1■■■■□ 3.21
NGDN-203ENST00000553336 UNC13AQ9UPW8 1703 aa34.94■■■■□ 3.18
NGDN-203ENST00000553336 ZCCHC6Q5VYS8 1495 aaKnown RBP34.91■■■■□ 3.18
NGDN-203ENST00000553336 BICRAQ9NZM4 1560 aa34.79■■■■□ 3.16
NGDN-203ENST00000553336 DCAF1Q9Y4B6 1507 aa34.79■■■■□ 3.16
NGDN-203ENST00000553336 SCRIBQ14160 1630 aa34.36■■■■□ 3.09
NGDN-203ENST00000553336 SHROOM4Q9ULL8 1493 aa34.35■■■■□ 3.09
NGDN-203ENST00000553336 CC2D2AQ9P2K1 1620 aa33.97■■■■□ 3.03
NGDN-203ENST00000553336 EIF4G1Q04637 1599 aaKnown RBP33.94■■■■□ 3.02
NGDN-203ENST00000553336 CECR2Q9BXF3 1484 aa33.89■■■■□ 3.02
NGDN-203ENST00000553336 NCAPD3P42695 1498 aa32.94■■■□□ 2.86
NGDN-203ENST00000553336 ATAD2BQ9ULI0 1458 aa32.85■■■□□ 2.85
NGDN-203ENST00000553336 SMARCA4P51532 1647 aa32.79■■■□□ 2.84
NGDN-203ENST00000553336 SMARCA2P51531 1590 aa32.73■■■□□ 2.83
NGDN-203ENST00000553336 BAZ1AQ9NRL2 1556 aaPredicted RBP32.67■■■□□ 2.82
NGDN-203ENST00000553336 HMGXB3Q12766 1538 aa32.66■■■□□ 2.82
NGDN-203ENST00000553336 BAZ1BQ9UIG0 1483 aaKnown RBP32.52■■■□□ 2.8
NGDN-203ENST00000553336 PEG3Q9GZU2 1588 aa32.49■■■□□ 2.79
NGDN-203ENST00000553336 ERCC6Q03468 1493 aa32.48■■■□□ 2.79
NGDN-203ENST00000553336 MROH2BQ7Z745 1585 aa32.45■■■□□ 2.78
NGDN-203ENST00000553336 CUX2O14529 1486 aa32.38■■■□□ 2.77
NGDN-203ENST00000553336 NESP48681 1621 aa32.36■■■□□ 2.77
NGDN-203ENST00000553336 DNAJC5Q9H3Z4 198 aa32.29■■■□□ 2.76
NGDN-203ENST00000553336 LAMC3Q9Y6N6 1575 aa32.13■■■□□ 2.73
NGDN-203ENST00000553336 WIZO95785 1651 aa32.03■■■□□ 2.72
NGDN-203ENST00000553336 PDS5BQ9NTI5 1447 aa32■■■□□ 2.71
NGDN-203ENST00000553336 THOC2Q8NI27 1593 aaKnown RBP31.96■■■□□ 2.71
NGDN-203ENST00000553336 CADPSQ9ULU8 1353 aa31.95■■■□□ 2.71
NGDN-203ENST00000553336 KIF21AQ7Z4S6 1674 aa31.86■■■□□ 2.69
NGDN-203ENST00000553336 RSF1Q96T23 1441 aaPredicted RBP31.84■■■□□ 2.69
NGDN-203ENST00000553336 MRC2Q9UBG0 1479 aa31.68■■■□□ 2.66
NGDN-203ENST00000553336 TOP2AP11388 1531 aaKnown RBP31.65■■■□□ 2.66
NGDN-203ENST00000553336 CFTRP13569 1480 aa31.59■■■□□ 2.65
NGDN-203ENST00000553336 WDR62O43379 1518 aa31.58■■■□□ 2.65
NGDN-203ENST00000553336 CEP164Q9UPV0 1460 aa31.58■■■□□ 2.65
NGDN-203ENST00000553336 FANCD2Q9BXW9 1451 aa31.57■■■□□ 2.64
NGDN-203ENST00000553336 CCDC88BA6NC98 1476 aa31.33■■■□□ 2.61
NGDN-203ENST00000553336 URB2Q14146 1524 aaKnown RBP31.29■■■□□ 2.6
NGDN-203ENST00000553336 PRDM2Q13029 1718 aa31.15■■■□□ 2.58
NGDN-203ENST00000553336 OSCARQ8IYS5 282 aa30.98■■■□□ 2.55
NGDN-203ENST00000553336 TOPBP1Q92547 1522 aa30.97■■■□□ 2.55
NGDN-203ENST00000553336 IFT140Q96RY7 1462 aa30.95■■■□□ 2.55
NGDN-203ENST00000553336 ABCC8Q09428 1581 aa30.92■■■□□ 2.54
NGDN-203ENST00000553336 TRIM41Q8WV44 630 aa30.91■■■□□ 2.54
NGDN-203ENST00000553336 ZNF608Q9ULD9 1512 aaPredicted RBP30.89■■■□□ 2.54
NGDN-203ENST00000553336 DNMBPQ6XZF7 1577 aa30.84■■■□□ 2.53
NGDN-203ENST00000553336 EIF4G3O43432 1585 aaKnown RBP30.67■■■□□ 2.5
NGDN-203ENST00000553336 POLA1P09884 1462 aaPredicted RBP30.67■■■□□ 2.5
NGDN-203ENST00000553336 TARBP1Q13395 1621 aaKnown RBP30.66■■■□□ 2.5
NGDN-203ENST00000553336 AQRO60306 1485 aaKnown RBP eCLIP30.64■■■□□ 2.54e-7■■■■■ 36
NGDN-203ENST00000553336 RAD54L2Q9Y4B4 1467 aa30.57■■■□□ 2.48
NGDN-203ENST00000553336 SOGA1O94964 1423 aa30.56■■■□□ 2.48
NGDN-203ENST00000553336 SUPT5HO00267 1087 aaKnown RBP30.56■■■□□ 2.48
NGDN-203ENST00000553336 TDRD9Q8NDG6 1382 aaKnown RBP30.49■■■□□ 2.47
NGDN-203ENST00000553336 FGD5Q6ZNL6 1462 aa30.49■■■□□ 2.47
NGDN-203ENST00000553336 CUX1P39880 1505 aa30.47■■■□□ 2.47
NGDN-203ENST00000553336 RIMBP3CA6NJZ7 1639 aa30.47■■■□□ 2.47
NGDN-203ENST00000553336 RIMBP3BA6NNM3 1639 aa30.47■■■□□ 2.47
NGDN-203ENST00000553336 RIMBP3Q9UFD9 1639 aa30.47■■■□□ 2.47
NGDN-203ENST00000553336 FBLN2P98095 1184 aa30.45■■■□□ 2.47
NGDN-203ENST00000553336 ARHGEF11O15085 1522 aa30.42■■■□□ 2.46
NGDN-203ENST00000553336 CHD1O14646 1710 aa30.39■■■□□ 2.45
NGDN-203ENST00000553336 WDR97A6NE52 1622 aa30.35■■■□□ 2.45
NGDN-203ENST00000553336 SNAPC4Q5SXM2 1469 aa30.31■■■□□ 2.44
NGDN-203ENST00000553336 GRIN2BQ13224 1484 aa30.26■■■□□ 2.44
NGDN-203ENST00000553336 CYB5RLQ6IPT4 315 aa30.25■■■□□ 2.43
NGDN-203ENST00000553336 CHMP7Q8WUX9 453 aaPredicted RBP30.24■■■□□ 2.43
NGDN-203ENST00000553336 MAGI1Q96QZ7 1491 aaPredicted RBP30.24■■■□□ 2.43
NGDN-203ENST00000553336 GAPVD1Q14C86 1478 aa30.17■■■□□ 2.42
NGDN-203ENST00000553336 ABCA10Q8WWZ4 1543 aa30.16■■■□□ 2.42
NGDN-203ENST00000553336 SYNJ2O15056 1496 aa30.14■■■□□ 2.42
NGDN-203ENST00000553336 ARAP1Q96P48 1450 aa30.13■■■□□ 2.41
NGDN-203ENST00000553336 CLASP1Q7Z460 1538 aa30.11■■■□□ 2.41
NGDN-203ENST00000553336 SYNJ1O43426 1573 aa30.09■■■□□ 2.41
NGDN-203ENST00000553336 WRNQ14191 1432 aaPredicted RBP eCLIP30.08■■■□□ 2.41
NGDN-203ENST00000553336 ABCA5Q8WWZ7 1642 aa30.06■■■□□ 2.4
NGDN-203ENST00000553336 PBRM1Q86U86 1689 aa30.05■■■□□ 2.4
NGDN-203ENST00000553336 TOP2BQ02880 1626 aa30■■■□□ 2.39
NGDN-203ENST00000553336 BIVM-ERCC5R4GMW8 1640 aa29.98■■■□□ 2.39
NGDN-203ENST00000553336 TRHP20396 242 aaPredicted RBP29.87■■■□□ 2.37
NGDN-203ENST00000553336 GRIN2AQ12879 1464 aa29.87■■■□□ 2.37
NGDN-203ENST00000553336 ADAMTS12P58397 1594 aa29.82■■■□□ 2.36
NGDN-203ENST00000553336 FHAD1B1AJZ9 1412 aa29.8■■■□□ 2.36
NGDN-203ENST00000553336 ERICH3Q5RHP9 1530 aa29.77■■■□□ 2.36
NGDN-203ENST00000553336 NUP160Q12769 1436 aa29.77■■■□□ 2.36
NGDN-203ENST00000553336 CEP170Q5SW79 1584 aa29.73■■■□□ 2.35
NGDN-203ENST00000553336 ERCC6L2Q5T890 1561 aa29.64■■■□□ 2.34
NGDN-203ENST00000553336 SHROOM2Q13796 1616 aa29.57■■■□□ 2.32
NGDN-203ENST00000553336 JPH4Q96JJ6 628 aa29.51■■■□□ 2.31
NGDN-203ENST00000553336 PRG4Q92954 1404 aaPredicted RBP29.48■■■□□ 2.31
NGDN-203ENST00000553336 IGF1RP08069 1367 aa29.48■■■□□ 2.31
NGDN-203ENST00000553336 KIF27Q86VH2 1401 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms