RNA–Protein interactions for RNA: ENST00000553334.1

RAD51B-215, Transcript of RAD51 paralog B, humanhuman

TSL 3

Gene RAD51B, Length 249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-215ENST00000553334 NISCHQ9Y2I1 1504 aa16.67■□□□□ 0.26
RAD51B-215ENST00000553334 CCDC180Q9P1Z9 1646 aa14.93□□□□□ -0.02
RAD51B-215ENST00000553334 ABCC9O60706 1549 aa14.92□□□□□ -0.02
RAD51B-215ENST00000553334 RB1CC1Q8TDY2 1594 aa14.2□□□□□ -0.14
RAD51B-215ENST00000553334 DCAF8L2P0C7V8 631 aa14.12□□□□□ -0.15
RAD51B-215ENST00000553334 NACADO15069 1562 aa14.11□□□□□ -0.15
RAD51B-215ENST00000553334 DNAJC5BQ9UF47 199 aa14.04□□□□□ -0.16
RAD51B-215ENST00000553334 UNC13AQ9UPW8 1703 aa13.98□□□□□ -0.17
RAD51B-215ENST00000553334 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
RAD51B-215ENST00000553334 MYO15BQ96JP2 1530 aa13.91□□□□□ -0.18
RAD51B-215ENST00000553334 BICRAQ9NZM4 1560 aa13.81□□□□□ -0.2
RAD51B-215ENST00000553334 ZCCHC6Q5VYS8 1495 aaKnown RBP13.79□□□□□ -0.2
RAD51B-215ENST00000553334 DCAF1Q9Y4B6 1507 aa13.74□□□□□ -0.21
RAD51B-215ENST00000553334 SCRIBQ14160 1630 aa13.61□□□□□ -0.23
RAD51B-215ENST00000553334 SHROOM4Q9ULL8 1493 aa13.55□□□□□ -0.24
RAD51B-215ENST00000553334 CC2D2AQ9P2K1 1620 aa13.49□□□□□ -0.25
RAD51B-215ENST00000553334 EIF4G1Q04637 1599 aaKnown RBP13.45□□□□□ -0.26
RAD51B-215ENST00000553334 CECR2Q9BXF3 1484 aa13.42□□□□□ -0.26
RAD51B-215ENST00000553334 NCAPD3P42695 1498 aa13.04□□□□□ -0.32
RAD51B-215ENST00000553334 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
RAD51B-215ENST00000553334 ATAD2BQ9ULI0 1458 aa12.99□□□□□ -0.33
RAD51B-215ENST00000553334 SMARCA2P51531 1590 aa12.94□□□□□ -0.34
RAD51B-215ENST00000553334 BAZ1AQ9NRL2 1556 aaPredicted RBP12.91□□□□□ -0.34
RAD51B-215ENST00000553334 HMGXB3Q12766 1538 aa12.91□□□□□ -0.34
RAD51B-215ENST00000553334 MROH2BQ7Z745 1585 aa12.86□□□□□ -0.35
RAD51B-215ENST00000553334 PEG3Q9GZU2 1588 aa12.86□□□□□ -0.35
RAD51B-215ENST00000553334 ERCC6Q03468 1493 aa12.85□□□□□ -0.35
RAD51B-215ENST00000553334 BAZ1BQ9UIG0 1483 aaKnown RBP12.85□□□□□ -0.35
RAD51B-215ENST00000553334 DNAJC5Q9H3Z4 198 aa12.84□□□□□ -0.35
RAD51B-215ENST00000553334 NESP48681 1621 aa12.84□□□□□ -0.35
RAD51B-215ENST00000553334 CUX2O14529 1486 aa12.81□□□□□ -0.36
RAD51B-215ENST00000553334 WIZO95785 1651 aa12.73□□□□□ -0.37
RAD51B-215ENST00000553334 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
RAD51B-215ENST00000553334 KIF21AQ7Z4S6 1674 aa12.7□□□□□ -0.38
RAD51B-215ENST00000553334 THOC2Q8NI27 1593 aaKnown RBP12.67□□□□□ -0.38
RAD51B-215ENST00000553334 PDS5BQ9NTI5 1447 aa12.65□□□□□ -0.38
RAD51B-215ENST00000553334 CADPSQ9ULU8 1353 aa12.65□□□□□ -0.38
RAD51B-215ENST00000553334 RSF1Q96T23 1441 aaPredicted RBP12.6□□□□□ -0.39
RAD51B-215ENST00000553334 MRC2Q9UBG0 1479 aa12.53□□□□□ -0.4
RAD51B-215ENST00000553334 TOP2AP11388 1531 aaKnown RBP12.51□□□□□ -0.41
RAD51B-215ENST00000553334 WDR62O43379 1518 aa12.49□□□□□ -0.41
RAD51B-215ENST00000553334 CFTRP13569 1480 aa12.49□□□□□ -0.41
RAD51B-215ENST00000553334 FANCD2Q9BXW9 1451 aa12.48□□□□□ -0.41
RAD51B-215ENST00000553334 CEP164Q9UPV0 1460 aa12.48□□□□□ -0.41
RAD51B-215ENST00000553334 PRDM2Q13029 1718 aa12.42□□□□□ -0.42
RAD51B-215ENST00000553334 CCDC88BA6NC98 1476 aa12.41□□□□□ -0.42
RAD51B-215ENST00000553334 URB2Q14146 1524 aaKnown RBP12.39□□□□□ -0.43
RAD51B-215ENST00000553334 OSCARQ8IYS5 282 aa12.3□□□□□ -0.44
RAD51B-215ENST00000553334 TRIM41Q8WV44 630 aa12.28□□□□□ -0.44
RAD51B-215ENST00000553334 TOPBP1Q92547 1522 aa12.26□□□□□ -0.45
RAD51B-215ENST00000553334 ZNF608Q9ULD9 1512 aaPredicted RBP12.25□□□□□ -0.45
RAD51B-215ENST00000553334 ABCC8Q09428 1581 aa12.24□□□□□ -0.45
RAD51B-215ENST00000553334 IFT140Q96RY7 1462 aa12.24□□□□□ -0.45
RAD51B-215ENST00000553334 DNMBPQ6XZF7 1577 aa12.21□□□□□ -0.46
RAD51B-215ENST00000553334 TARBP1Q13395 1621 aaKnown RBP12.17□□□□□ -0.46
RAD51B-215ENST00000553334 AQRO60306 1485 aaKnown RBP eCLIP12.15□□□□□ -0.46
RAD51B-215ENST00000553334 EIF4G3O43432 1585 aaKnown RBP12.15□□□□□ -0.46
RAD51B-215ENST00000553334 POLA1P09884 1462 aaPredicted RBP12.13□□□□□ -0.47
RAD51B-215ENST00000553334 RIMBP3CA6NJZ7 1639 aa12.11□□□□□ -0.47
RAD51B-215ENST00000553334 RIMBP3BA6NNM3 1639 aa12.11□□□□□ -0.47
RAD51B-215ENST00000553334 RIMBP3Q9UFD9 1639 aa12.11□□□□□ -0.47
RAD51B-215ENST00000553334 CHD1O14646 1710 aa12.11□□□□□ -0.47
RAD51B-215ENST00000553334 RAD54L2Q9Y4B4 1467 aa12.11□□□□□ -0.47
RAD51B-215ENST00000553334 SUPT5HO00267 1087 aaKnown RBP12.11□□□□□ -0.47
RAD51B-215ENST00000553334 SOGA1O94964 1423 aa12.1□□□□□ -0.47
RAD51B-215ENST00000553334 TDRD9Q8NDG6 1382 aaKnown RBP12.08□□□□□ -0.48
RAD51B-215ENST00000553334 FBLN2P98095 1184 aa12.08□□□□□ -0.48
RAD51B-215ENST00000553334 CUX1P39880 1505 aa12.06□□□□□ -0.48
RAD51B-215ENST00000553334 FGD5Q6ZNL6 1462 aa12.06□□□□□ -0.48
RAD51B-215ENST00000553334 ARHGEF11O15085 1522 aa12.05□□□□□ -0.48
RAD51B-215ENST00000553334 CYB5RLQ6IPT4 315 aa12.02□□□□□ -0.49
RAD51B-215ENST00000553334 WDR97A6NE52 1622 aa12□□□□□ -0.49
RAD51B-215ENST00000553334 CHMP7Q8WUX9 453 aaPredicted RBP11.99□□□□□ -0.49
RAD51B-215ENST00000553334 SNAPC4Q5SXM2 1469 aa11.99□□□□□ -0.49
RAD51B-215ENST00000553334 GRIN2BQ13224 1484 aa11.96□□□□□ -0.49
RAD51B-215ENST00000553334 PBRM1Q86U86 1689 aa11.96□□□□□ -0.5
RAD51B-215ENST00000553334 MAGI1Q96QZ7 1491 aaPredicted RBP11.95□□□□□ -0.5
RAD51B-215ENST00000553334 GAPVD1Q14C86 1478 aa11.94□□□□□ -0.5
RAD51B-215ENST00000553334 ARAP1Q96P48 1450 aa11.93□□□□□ -0.5
RAD51B-215ENST00000553334 ABCA10Q8WWZ4 1543 aa11.92□□□□□ -0.5
RAD51B-215ENST00000553334 SYNJ1O43426 1573 aa11.92□□□□□ -0.5
RAD51B-215ENST00000553334 CLASP1Q7Z460 1538 aa11.91□□□□□ -0.5
RAD51B-215ENST00000553334 SYNJ2O15056 1496 aa11.91□□□□□ -0.5
RAD51B-215ENST00000553334 ABCA5Q8WWZ7 1642 aa11.9□□□□□ -0.5
RAD51B-215ENST00000553334 BIVM-ERCC5R4GMW8 1640 aa11.89□□□□□ -0.51
RAD51B-215ENST00000553334 WRNQ14191 1432 aaPredicted RBP eCLIP11.88□□□□□ -0.51
RAD51B-215ENST00000553334 TOP2BQ02880 1626 aa11.88□□□□□ -0.51
RAD51B-215ENST00000553334 TRHP20396 242 aaPredicted RBP11.86□□□□□ -0.51
RAD51B-215ENST00000553334 GRIN2AQ12879 1464 aa11.81□□□□□ -0.52
RAD51B-215ENST00000553334 ADAMTS12P58397 1594 aa11.79□□□□□ -0.52
RAD51B-215ENST00000553334 FHAD1B1AJZ9 1412 aa11.78□□□□□ -0.52
RAD51B-215ENST00000553334 ERICH3Q5RHP9 1530 aa11.77□□□□□ -0.52
RAD51B-215ENST00000553334 CEP170Q5SW79 1584 aa11.77□□□□□ -0.53
RAD51B-215ENST00000553334 ERCC6L2Q5T890 1561 aa11.77□□□□□ -0.53
RAD51B-215ENST00000553334 NUP160Q12769 1436 aa11.77□□□□□ -0.53
RAD51B-215ENST00000553334 SHROOM2Q13796 1616 aa11.73□□□□□ -0.53
RAD51B-215ENST00000553334 JPH4Q96JJ6 628 aa11.71□□□□□ -0.53
RAD51B-215ENST00000553334 IGF1RP08069 1367 aa11.67□□□□□ -0.54
RAD51B-215ENST00000553334 PRG4Q92954 1404 aaPredicted RBP11.67□□□□□ -0.54
RAD51B-215ENST00000553334 KIF27Q86VH2 1401 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms