RNA–Protein interactions for RNA: ENST00000553064.6

PCBP2-225, Transcript of poly(rC) binding protein 2, humanhuman

TSL 5

Gene PCBP2, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP2-225ENST00000553064 NISCHQ9Y2I1 1504 aa30.77■■■□□ 2.52
PCBP2-225ENST00000553064 CCDC180Q9P1Z9 1646 aa26.91■■□□□ 1.9
PCBP2-225ENST00000553064 ZCCHC6Q5VYS8 1495 aaKnown RBP25.84■■□□□ 1.73
PCBP2-225ENST00000553064 DCAF1Q9Y4B6 1507 aa25.54■■□□□ 1.68
PCBP2-225ENST00000553064 DCAF8L2P0C7V8 631 aa25.44■■□□□ 1.66
PCBP2-225ENST00000553064 ABCC9O60706 1549 aa25.37■■□□□ 1.65
PCBP2-225ENST00000553064 MYO15BQ96JP2 1530 aa25.3■■□□□ 1.64
PCBP2-225ENST00000553064 NACADO15069 1562 aa25.11■■□□□ 1.61
PCBP2-225ENST00000553064 SHROOM4Q9ULL8 1493 aa24.95■■□□□ 1.58
PCBP2-225ENST00000553064 RB1CC1Q8TDY2 1594 aa24.9■■□□□ 1.58
PCBP2-225ENST00000553064 SCRIBQ14160 1630 aa24.62■■□□□ 1.53
PCBP2-225ENST00000553064 UNC13AQ9UPW8 1703 aa24.15■■□□□ 1.46
PCBP2-225ENST00000553064 SUPT5HO00267 1087 aaKnown RBP24.06■■□□□ 1.44
PCBP2-225ENST00000553064 BICRAQ9NZM4 1560 aa23.96■■□□□ 1.43
PCBP2-225ENST00000553064 PABPN1Q86U42 306 aaKnown RBP eCLIP23.9■■□□□ 1.42
PCBP2-225ENST00000553064 BAZ1AQ9NRL2 1556 aaPredicted RBP23.84■■□□□ 1.41
PCBP2-225ENST00000553064 RSF1Q96T23 1441 aaPredicted RBP23.82■■□□□ 1.4
PCBP2-225ENST00000553064 CECR2Q9BXF3 1484 aa23.79■■□□□ 1.4
PCBP2-225ENST00000553064 MROH2BQ7Z745 1585 aa23.68■■□□□ 1.38
PCBP2-225ENST00000553064 SMARCA4P51532 1647 aa23.64■■□□□ 1.38
PCBP2-225ENST00000553064 WIZO95785 1651 aa23.46■■□□□ 1.35
PCBP2-225ENST00000553064 PEG3Q9GZU2 1588 aa23.4■■□□□ 1.34
PCBP2-225ENST00000553064 SMARCA2P51531 1590 aa23.38■■□□□ 1.33
PCBP2-225ENST00000553064 TOP2AP11388 1531 aaKnown RBP23.34■■□□□ 1.33
PCBP2-225ENST00000553064 EIF4G1Q04637 1599 aaKnown RBP23.34■■□□□ 1.33
PCBP2-225ENST00000553064 ATAD2BQ9ULI0 1458 aa23.29■■□□□ 1.32
PCBP2-225ENST00000553064 BAZ1BQ9UIG0 1483 aaKnown RBP23.21■■□□□ 1.31
PCBP2-225ENST00000553064 NCAPD3P42695 1498 aa23.15■■□□□ 1.3
PCBP2-225ENST00000553064 HMGXB3Q12766 1538 aa23.12■■□□□ 1.29
PCBP2-225ENST00000553064 CCDC88BA6NC98 1476 aa23.05■■□□□ 1.28
PCBP2-225ENST00000553064 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
PCBP2-225ENST00000553064 CC2D2AQ9P2K1 1620 aa22.97■■□□□ 1.27
PCBP2-225ENST00000553064 TRIM41Q8WV44 630 aa22.74■■□□□ 1.23
PCBP2-225ENST00000553064 CFTRP13569 1480 aa22.6■■□□□ 1.21
PCBP2-225ENST00000553064 CADPSQ9ULU8 1353 aa22.56■■□□□ 1.2
PCBP2-225ENST00000553064 WRNQ14191 1432 aaPredicted RBP eCLIP22.5■■□□□ 1.19
PCBP2-225ENST00000553064 ABCC8Q09428 1581 aa22.47■■□□□ 1.19
PCBP2-225ENST00000553064 PRDM2Q13029 1718 aa22.44■■□□□ 1.18
PCBP2-225ENST00000553064 LAMC3Q9Y6N6 1575 aa22.39■■□□□ 1.18
PCBP2-225ENST00000553064 TOP2BQ02880 1626 aa22.28■■□□□ 1.16
PCBP2-225ENST00000553064 EEA1Q15075 1411 aa22.28■■□□□ 1.16
PCBP2-225ENST00000553064 PDS5BQ9NTI5 1447 aa22.28■■□□□ 1.16
PCBP2-225ENST00000553064 DNAJC5BQ9UF47 199 aa22.28■■□□□ 1.16
PCBP2-225ENST00000553064 FANCD2Q9BXW9 1451 aa22.28■■□□□ 1.16
PCBP2-225ENST00000553064 SYNJ1O43426 1573 aa22.27■■□□□ 1.16
PCBP2-225ENST00000553064 BIVM-ERCC5R4GMW8 1640 aa22.23■■□□□ 1.15
PCBP2-225ENST00000553064 NESP48681 1621 aa22.19■■□□□ 1.14
PCBP2-225ENST00000553064 CEP164Q9UPV0 1460 aa22.19■■□□□ 1.14
PCBP2-225ENST00000553064 FAM9AQ8IZU1 332 aaPredicted RBP22.17■■□□□ 1.14
PCBP2-225ENST00000553064 CUX1P39880 1505 aa22.17■■□□□ 1.14
PCBP2-225ENST00000553064 SOGA1O94964 1423 aa22.08■■□□□ 1.12
PCBP2-225ENST00000553064 DNMBPQ6XZF7 1577 aa22.07■■□□□ 1.12
PCBP2-225ENST00000553064 CSRNP3Q8WYN3 585 aa22.05■■□□□ 1.12
PCBP2-225ENST00000553064 LOC105371045A0A1W2PR82 267 aa22.03■■□□□ 1.12
PCBP2-225ENST00000553064 TOPBP1Q92547 1522 aa22■■□□□ 1.11
PCBP2-225ENST00000553064 KIF27Q86VH2 1401 aa21.99■■□□□ 1.11
PCBP2-225ENST00000553064 FGD5Q6ZNL6 1462 aa21.98■■□□□ 1.11
PCBP2-225ENST00000553064 KIF21AQ7Z4S6 1674 aa21.94■■□□□ 1.1
PCBP2-225ENST00000553064 URB2Q14146 1524 aaKnown RBP21.92■■□□□ 1.1
PCBP2-225ENST00000553064 MRC2Q9UBG0 1479 aa21.92■■□□□ 1.1
PCBP2-225ENST00000553064 RUSC2Q8N2Y8 1516 aa21.91■■□□□ 1.1
PCBP2-225ENST00000553064 ERCC6Q03468 1493 aa21.91■■□□□ 1.1
PCBP2-225ENST00000553064 POLA1P09884 1462 aaPredicted RBP21.89■■□□□ 1.09
PCBP2-225ENST00000553064 GOLGA3Q08378 1498 aa21.87■■□□□ 1.09
PCBP2-225ENST00000553064 CUX2O14529 1486 aa21.86■■□□□ 1.09
PCBP2-225ENST00000553064 KIF21BO75037 1637 aa21.85■■□□□ 1.09
PCBP2-225ENST00000553064 ABCA10Q8WWZ4 1543 aa21.84■■□□□ 1.09
PCBP2-225ENST00000553064 UBTFP17480 764 aaKnown RBP21.79■■□□□ 1.08
PCBP2-225ENST00000553064 TNIKQ9UKE5 1360 aa21.79■■□□□ 1.08
PCBP2-225ENST00000553064 EHMT2Q96KQ7 1210 aa21.79■■□□□ 1.08
PCBP2-225ENST00000553064 WDR62O43379 1518 aa21.77■■□□□ 1.08
PCBP2-225ENST00000553064 ERICH3Q5RHP9 1530 aa21.76■■□□□ 1.07
PCBP2-225ENST00000553064 RAD54L2Q9Y4B4 1467 aa21.74■■□□□ 1.07
PCBP2-225ENST00000553064 PRXQ9BXM0 1461 aa21.74■■□□□ 1.07
PCBP2-225ENST00000553064 IGF1RP08069 1367 aa21.7■■□□□ 1.06
PCBP2-225ENST00000553064 IFT140Q96RY7 1462 aa21.68■■□□□ 1.06
PCBP2-225ENST00000553064 RAPGEF2Q9Y4G8 1499 aa21.66■■□□□ 1.06
PCBP2-225ENST00000553064 WDR97A6NE52 1622 aa21.66■■□□□ 1.06
PCBP2-225ENST00000553064 CARMIL1Q5VZK9 1371 aa21.64■■□□□ 1.05
PCBP2-225ENST00000553064 THOC2Q8NI27 1593 aaKnown RBP21.64■■□□□ 1.05
PCBP2-225ENST00000553064 TARBP1Q13395 1621 aaKnown RBP21.63■■□□□ 1.05
PCBP2-225ENST00000553064 GAPVD1Q14C86 1478 aa21.63■■□□□ 1.05
PCBP2-225ENST00000553064 CEP162Q5TB80 1403 aa21.62■■□□□ 1.05
PCBP2-225ENST00000553064 CUL7Q14999 1698 aa21.61■■□□□ 1.05
PCBP2-225ENST00000553064 ABCA5Q8WWZ7 1642 aa21.6■■□□□ 1.05
PCBP2-225ENST00000553064 TDRD9Q8NDG6 1382 aaKnown RBP21.59■■□□□ 1.05
PCBP2-225ENST00000553064 CLIP1P30622 1438 aa21.5■■□□□ 1.03
PCBP2-225ENST00000553064 GRIN2BQ13224 1484 aa21.5■■□□□ 1.03
PCBP2-225ENST00000553064 AQRO60306 1485 aaKnown RBP eCLIP21.44■■□□□ 1.022e-7■■■■■ 30
PCBP2-225ENST00000553064 FHAD1B1AJZ9 1412 aa21.43■■□□□ 1.02
PCBP2-225ENST00000553064 PBRM1Q86U86 1689 aa21.42■■□□□ 1.02
PCBP2-225ENST00000553064 ZNF608Q9ULD9 1512 aaPredicted RBP21.39■■□□□ 1.01
PCBP2-225ENST00000553064 EIF4G3O43432 1585 aaKnown RBP21.37■■□□□ 1.01
PCBP2-225ENST00000553064 MAGI1Q96QZ7 1491 aaPredicted RBP21.34■■□□□ 1.01
PCBP2-225ENST00000553064 ADAMTS12P58397 1594 aa21.34■■□□□ 1.01
PCBP2-225ENST00000553064 VPS8Q8N3P4 1428 aa21.31■■□□□ 1
PCBP2-225ENST00000553064 RANGAP1P46060 587 aaPredicted RBP21.31■■□□□ 1
PCBP2-225ENST00000553064 SNAPC4Q5SXM2 1469 aa21.28■■□□□ 1
PCBP2-225ENST00000553064 CTTNBP2Q8WZ74 1663 aa21.27■■□□□ 1
PCBP2-225ENST00000553064 APLP2Q06481 763 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms