RNA–Protein interactions for RNA: ENST00000553040.5

LMBR1L-229, Transcript of limb development membrane protein 1 like, humanhuman

TSL 5

Gene LMBR1L, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-229ENST00000553040 NISCHQ9Y2I1 1504 aa26.45■■□□□ 1.83
LMBR1L-229ENST00000553040 CCDC180Q9P1Z9 1646 aa23.55■■□□□ 1.36
LMBR1L-229ENST00000553040 ABCC9O60706 1549 aa23.26■■□□□ 1.31
LMBR1L-229ENST00000553040 RB1CC1Q8TDY2 1594 aa22.25■■□□□ 1.15
LMBR1L-229ENST00000553040 DCAF8L2P0C7V8 631 aa22.22■■□□□ 1.15
LMBR1L-229ENST00000553040 NACADO15069 1562 aa22.19■■□□□ 1.14
LMBR1L-229ENST00000553040 ZCCHC6Q5VYS8 1495 aaKnown RBP21.98■■□□□ 1.11
LMBR1L-229ENST00000553040 MYO15BQ96JP2 1530 aa21.97■■□□□ 1.11
LMBR1L-229ENST00000553040 DCAF1Q9Y4B6 1507 aa21.85■■□□□ 1.09
LMBR1L-229ENST00000553040 UNC13AQ9UPW8 1703 aa21.81■■□□□ 1.08
LMBR1L-229ENST00000553040 PABPN1Q86U42 306 aaKnown RBP eCLIP21.73■■□□□ 1.071e-9■■■■□ 22.8
LMBR1L-229ENST00000553040 BICRAQ9NZM4 1560 aa21.63■■□□□ 1.05
LMBR1L-229ENST00000553040 DNAJC5BQ9UF47 199 aa21.53■■□□□ 1.04
LMBR1L-229ENST00000553040 SCRIBQ14160 1630 aa21.52■■□□□ 1.04
LMBR1L-229ENST00000553040 SHROOM4Q9ULL8 1493 aa21.29■■□□□ 1
LMBR1L-229ENST00000553040 EIF4G1Q04637 1599 aaKnown RBP21.05■□□□□ 0.96
LMBR1L-229ENST00000553040 CC2D2AQ9P2K1 1620 aa21.01■□□□□ 0.95
LMBR1L-229ENST00000553040 CECR2Q9BXF3 1484 aa20.89■□□□□ 0.94
LMBR1L-229ENST00000553040 SMARCA4P51532 1647 aa20.56■□□□□ 0.88
LMBR1L-229ENST00000553040 BAZ1AQ9NRL2 1556 aaPredicted RBP20.49■□□□□ 0.87
LMBR1L-229ENST00000553040 NCAPD3P42695 1498 aa20.49■□□□□ 0.87
LMBR1L-229ENST00000553040 ATAD2BQ9ULI0 1458 aa20.49■□□□□ 0.87
LMBR1L-229ENST00000553040 SMARCA2P51531 1590 aa20.43■□□□□ 0.86
LMBR1L-229ENST00000553040 MROH2BQ7Z745 1585 aa20.41■□□□□ 0.86
LMBR1L-229ENST00000553040 HMGXB3Q12766 1538 aa20.35■□□□□ 0.85
LMBR1L-229ENST00000553040 PEG3Q9GZU2 1588 aa20.34■□□□□ 0.85
LMBR1L-229ENST00000553040 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
LMBR1L-229ENST00000553040 WIZO95785 1651 aa20.19■□□□□ 0.82
LMBR1L-229ENST00000553040 RSF1Q96T23 1441 aaPredicted RBP20.1■□□□□ 0.81
LMBR1L-229ENST00000553040 NESP48681 1621 aa20.09■□□□□ 0.81
LMBR1L-229ENST00000553040 ERCC6Q03468 1493 aa20.02■□□□□ 0.8
LMBR1L-229ENST00000553040 LAMC3Q9Y6N6 1575 aa19.96■□□□□ 0.79
LMBR1L-229ENST00000553040 TOP2AP11388 1531 aaKnown RBP19.92■□□□□ 0.78
LMBR1L-229ENST00000553040 CADPSQ9ULU8 1353 aa19.89■□□□□ 0.77
LMBR1L-229ENST00000553040 CUX2O14529 1486 aa19.85■□□□□ 0.77
LMBR1L-229ENST00000553040 KIF21AQ7Z4S6 1674 aa19.84■□□□□ 0.77
LMBR1L-229ENST00000553040 PDS5BQ9NTI5 1447 aa19.84■□□□□ 0.77
LMBR1L-229ENST00000553040 DNAJC5Q9H3Z4 198 aa19.81■□□□□ 0.76
LMBR1L-229ENST00000553040 THOC2Q8NI27 1593 aaKnown RBP19.78■□□□□ 0.76
LMBR1L-229ENST00000553040 CFTRP13569 1480 aa19.73■□□□□ 0.75
LMBR1L-229ENST00000553040 CCDC88BA6NC98 1476 aa19.72■□□□□ 0.75
LMBR1L-229ENST00000553040 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
LMBR1L-229ENST00000553040 MRC2Q9UBG0 1479 aa19.65■□□□□ 0.74
LMBR1L-229ENST00000553040 CEP164Q9UPV0 1460 aa19.64■□□□□ 0.73
LMBR1L-229ENST00000553040 WDR62O43379 1518 aa19.58■□□□□ 0.73
LMBR1L-229ENST00000553040 PRDM2Q13029 1718 aa19.58■□□□□ 0.72
LMBR1L-229ENST00000553040 SUPT5HO00267 1087 aaKnown RBP19.52■□□□□ 0.72
LMBR1L-229ENST00000553040 URB2Q14146 1524 aaKnown RBP19.49■□□□□ 0.71
LMBR1L-229ENST00000553040 TOPBP1Q92547 1522 aa19.33■□□□□ 0.68
LMBR1L-229ENST00000553040 ABCC8Q09428 1581 aa19.29■□□□□ 0.68
LMBR1L-229ENST00000553040 DNMBPQ6XZF7 1577 aa19.29■□□□□ 0.68
LMBR1L-229ENST00000553040 IFT140Q96RY7 1462 aa19.23■□□□□ 0.67
LMBR1L-229ENST00000553040 ZNF608Q9ULD9 1512 aaPredicted RBP19.2■□□□□ 0.66
LMBR1L-229ENST00000553040 POLA1P09884 1462 aaPredicted RBP19.16■□□□□ 0.66
LMBR1L-229ENST00000553040 TARBP1Q13395 1621 aaKnown RBP19.15■□□□□ 0.66
LMBR1L-229ENST00000553040 CUX1P39880 1505 aa19.15■□□□□ 0.66
LMBR1L-229ENST00000553040 RAD54L2Q9Y4B4 1467 aa19.1■□□□□ 0.65
LMBR1L-229ENST00000553040 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
LMBR1L-229ENST00000553040 FGD5Q6ZNL6 1462 aa19.09■□□□□ 0.65
LMBR1L-229ENST00000553040 SOGA1O94964 1423 aa19.08■□□□□ 0.65
LMBR1L-229ENST00000553040 AQRO60306 1485 aaKnown RBP eCLIP19.08■□□□□ 0.643e-7■■■■■ 27.8
LMBR1L-229ENST00000553040 OSCARQ8IYS5 282 aa19.03■□□□□ 0.64
LMBR1L-229ENST00000553040 TDRD9Q8NDG6 1382 aaKnown RBP19.02■□□□□ 0.64
LMBR1L-229ENST00000553040 WRNQ14191 1432 aaPredicted RBP eCLIP18.94■□□□□ 0.62
LMBR1L-229ENST00000553040 WDR97A6NE52 1622 aa18.94■□□□□ 0.62
LMBR1L-229ENST00000553040 SYNJ1O43426 1573 aa18.93■□□□□ 0.62
LMBR1L-229ENST00000553040 TOP2BQ02880 1626 aa18.92■□□□□ 0.62
LMBR1L-229ENST00000553040 BIVM-ERCC5R4GMW8 1640 aa18.92■□□□□ 0.62
LMBR1L-229ENST00000553040 CHD1O14646 1710 aa18.91■□□□□ 0.62
LMBR1L-229ENST00000553040 ABCA10Q8WWZ4 1543 aa18.89■□□□□ 0.61
LMBR1L-229ENST00000553040 FBLN2P98095 1184 aa18.88■□□□□ 0.61
LMBR1L-229ENST00000553040 SNAPC4Q5SXM2 1469 aa18.87■□□□□ 0.61
LMBR1L-229ENST00000553040 GRIN2BQ13224 1484 aa18.86■□□□□ 0.61
LMBR1L-229ENST00000553040 TRIM41Q8WV44 630 aa18.86■□□□□ 0.61
LMBR1L-229ENST00000553040 GAPVD1Q14C86 1478 aa18.85■□□□□ 0.61
LMBR1L-229ENST00000553040 PBRM1Q86U86 1689 aa18.83■□□□□ 0.61
LMBR1L-229ENST00000553040 ABCA5Q8WWZ7 1642 aa18.83■□□□□ 0.61
LMBR1L-229ENST00000553040 MAGI1Q96QZ7 1491 aaPredicted RBP18.81■□□□□ 0.6
LMBR1L-229ENST00000553040 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
LMBR1L-229ENST00000553040 SYNJ2O15056 1496 aa18.76■□□□□ 0.59
LMBR1L-229ENST00000553040 RIMBP3CA6NJZ7 1639 aa18.75■□□□□ 0.59
LMBR1L-229ENST00000553040 RIMBP3BA6NNM3 1639 aa18.75■□□□□ 0.59
LMBR1L-229ENST00000553040 RIMBP3Q9UFD9 1639 aa18.75■□□□□ 0.59
LMBR1L-229ENST00000553040 ARHGEF11O15085 1522 aa18.72■□□□□ 0.59
LMBR1L-229ENST00000553040 CLASP1Q7Z460 1538 aa18.67■□□□□ 0.58
LMBR1L-229ENST00000553040 ERICH3Q5RHP9 1530 aa18.65■□□□□ 0.58
LMBR1L-229ENST00000553040 ADAMTS12P58397 1594 aa18.65■□□□□ 0.58
LMBR1L-229ENST00000553040 GRIN2AQ12879 1464 aa18.63■□□□□ 0.57
LMBR1L-229ENST00000553040 FHAD1B1AJZ9 1412 aa18.62■□□□□ 0.57
LMBR1L-229ENST00000553040 CYB5RLQ6IPT4 315 aa18.59■□□□□ 0.57
LMBR1L-229ENST00000553040 ARAP1Q96P48 1450 aa18.57■□□□□ 0.56
LMBR1L-229ENST00000553040 CEP170Q5SW79 1584 aa18.55■□□□□ 0.56
LMBR1L-229ENST00000553040 NUP160Q12769 1436 aa18.55■□□□□ 0.56
LMBR1L-229ENST00000553040 KIF27Q86VH2 1401 aa18.55■□□□□ 0.56
LMBR1L-229ENST00000553040 IGF1RP08069 1367 aa18.53■□□□□ 0.56
LMBR1L-229ENST00000553040 ERCC6L2Q5T890 1561 aa18.45■□□□□ 0.54
LMBR1L-229ENST00000553040 CUL7Q14999 1698 aa18.44■□□□□ 0.54
LMBR1L-229ENST00000553040 SHROOM2Q13796 1616 aa18.42■□□□□ 0.54
LMBR1L-229ENST00000553040 CARMIL1Q5VZK9 1371 aa18.41■□□□□ 0.54
LMBR1L-229ENST00000553040 RUSC2Q8N2Y8 1516 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms