RNA–Protein interactions for RNA: ENST00000553002.1

LRP10-205, Transcript of LDL receptor related protein 10, humanhuman

TSL 2

Gene LRP10, Length 1,065 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP10-205ENST00000553002 NISCHQ9Y2I1 1504 aa35.29■■■■□ 3.24
LRP10-205ENST00000553002 CCDC180Q9P1Z9 1646 aa31.4■■■□□ 2.62
LRP10-205ENST00000553002 ABCC9O60706 1549 aa30.76■■■□□ 2.51
LRP10-205ENST00000553002 RB1CC1Q8TDY2 1594 aa29.61■■■□□ 2.33
LRP10-205ENST00000553002 NACADO15069 1562 aa29.58■■■□□ 2.33
LRP10-205ENST00000553002 DCAF8L2P0C7V8 631 aa29.55■■■□□ 2.32
LRP10-205ENST00000553002 MYO15BQ96JP2 1530 aa29.41■■■□□ 2.3
LRP10-205ENST00000553002 ZCCHC6Q5VYS8 1495 aaKnown RBP29.37■■■□□ 2.29
LRP10-205ENST00000553002 DCAF1Q9Y4B6 1507 aa29.24■■■□□ 2.27
LRP10-205ENST00000553002 UNC13AQ9UPW8 1703 aa28.8■■■□□ 2.2
LRP10-205ENST00000553002 PABPN1Q86U42 306 aaKnown RBP eCLIP28.74■■■□□ 2.19
LRP10-205ENST00000553002 BICRAQ9NZM4 1560 aa28.63■■■□□ 2.17
LRP10-205ENST00000553002 SCRIBQ14160 1630 aa28.6■■■□□ 2.17
LRP10-205ENST00000553002 SHROOM4Q9ULL8 1493 aa28.47■■■□□ 2.15
LRP10-205ENST00000553002 DNAJC5BQ9UF47 199 aa28.26■■■□□ 2.11
LRP10-205ENST00000553002 EIF4G1Q04637 1599 aaKnown RBP27.93■■■□□ 2.06
LRP10-205ENST00000553002 CC2D2AQ9P2K1 1620 aa27.81■■■□□ 2.04
LRP10-205ENST00000553002 CECR2Q9BXF3 1484 aa27.68■■■□□ 2.02
LRP10-205ENST00000553002 BAZ1AQ9NRL2 1556 aaPredicted RBP27.39■■□□□ 1.97
LRP10-205ENST00000553002 SMARCA4P51532 1647 aa27.37■■□□□ 1.97
LRP10-205ENST00000553002 NCAPD3P42695 1498 aa27.29■■□□□ 1.96
LRP10-205ENST00000553002 SMARCA2P51531 1590 aa27.26■■□□□ 1.96
LRP10-205ENST00000553002 ATAD2BQ9ULI0 1458 aa27.26■■□□□ 1.95
LRP10-205ENST00000553002 MROH2BQ7Z745 1585 aa27.16■■□□□ 1.94
LRP10-205ENST00000553002 PEG3Q9GZU2 1588 aa27.14■■□□□ 1.93
LRP10-205ENST00000553002 HMGXB3Q12766 1538 aa27.13■■□□□ 1.93
LRP10-205ENST00000553002 BAZ1BQ9UIG0 1483 aaKnown RBP27.06■■□□□ 1.92
LRP10-205ENST00000553002 RSF1Q96T23 1441 aaPredicted RBP26.86■■□□□ 1.89
LRP10-205ENST00000553002 WIZO95785 1651 aa26.84■■□□□ 1.89
LRP10-205ENST00000553002 TOP2AP11388 1531 aaKnown RBP26.61■■□□□ 1.85
LRP10-205ENST00000553002 ERCC6Q03468 1493 aa26.57■■□□□ 1.84
LRP10-205ENST00000553002 LAMC3Q9Y6N6 1575 aa26.57■■□□□ 1.84
LRP10-205ENST00000553002 NESP48681 1621 aa26.57■■□□□ 1.84
LRP10-205ENST00000553002 CADPSQ9ULU8 1353 aa26.5■■□□□ 1.83
LRP10-205ENST00000553002 PDS5BQ9NTI5 1447 aa26.44■■□□□ 1.82
LRP10-205ENST00000553002 CUX2O14529 1486 aa26.32■■□□□ 1.8
LRP10-205ENST00000553002 CFTRP13569 1480 aa26.3■■□□□ 1.8
LRP10-205ENST00000553002 CCDC88BA6NC98 1476 aa26.3■■□□□ 1.8
LRP10-205ENST00000553002 KIF21AQ7Z4S6 1674 aa26.23■■□□□ 1.79
LRP10-205ENST00000553002 THOC2Q8NI27 1593 aaKnown RBP26.18■■□□□ 1.78
LRP10-205ENST00000553002 FANCD2Q9BXW9 1451 aa26.17■■□□□ 1.78
LRP10-205ENST00000553002 SUPT5HO00267 1087 aaKnown RBP26.15■■□□□ 1.78
LRP10-205ENST00000553002 CEP164Q9UPV0 1460 aa26.15■■□□□ 1.78
LRP10-205ENST00000553002 MRC2Q9UBG0 1479 aa26.12■■□□□ 1.77
LRP10-205ENST00000553002 PRDM2Q13029 1718 aa26.03■■□□□ 1.76
LRP10-205ENST00000553002 WDR62O43379 1518 aa26.02■■□□□ 1.76
LRP10-205ENST00000553002 URB2Q14146 1524 aaKnown RBP25.88■■□□□ 1.73
LRP10-205ENST00000553002 ABCC8Q09428 1581 aa25.82■■□□□ 1.72
LRP10-205ENST00000553002 TOPBP1Q92547 1522 aa25.73■■□□□ 1.71
LRP10-205ENST00000553002 DNMBPQ6XZF7 1577 aa25.69■■□□□ 1.7
LRP10-205ENST00000553002 IFT140Q96RY7 1462 aa25.63■■□□□ 1.69
LRP10-205ENST00000553002 DNAJC5Q9H3Z4 198 aa25.59■■□□□ 1.69
LRP10-205ENST00000553002 POLA1P09884 1462 aaPredicted RBP25.5■■□□□ 1.67
LRP10-205ENST00000553002 CUX1P39880 1505 aa25.48■■□□□ 1.67
LRP10-205ENST00000553002 ZNF608Q9ULD9 1512 aaPredicted RBP25.44■■□□□ 1.66
LRP10-205ENST00000553002 SOGA1O94964 1423 aa25.44■■□□□ 1.66
LRP10-205ENST00000553002 FGD5Q6ZNL6 1462 aa25.43■■□□□ 1.66
LRP10-205ENST00000553002 TARBP1Q13395 1621 aaKnown RBP25.42■■□□□ 1.66
LRP10-205ENST00000553002 RAD54L2Q9Y4B4 1467 aa25.37■■□□□ 1.65
LRP10-205ENST00000553002 WRNQ14191 1432 aaPredicted RBP eCLIP25.36■■□□□ 1.65
LRP10-205ENST00000553002 EIF4G3O43432 1585 aaKnown RBP25.34■■□□□ 1.65
LRP10-205ENST00000553002 AQRO60306 1485 aaKnown RBP eCLIP25.31■■□□□ 1.645e-7■■■■■ 27.6
LRP10-205ENST00000553002 WDR97A6NE52 1622 aa25.3■■□□□ 1.64
LRP10-205ENST00000553002 TDRD9Q8NDG6 1382 aaKnown RBP25.28■■□□□ 1.64
LRP10-205ENST00000553002 TOP2BQ02880 1626 aa25.27■■□□□ 1.64
LRP10-205ENST00000553002 OSCARQ8IYS5 282 aa25.27■■□□□ 1.64
LRP10-205ENST00000553002 BIVM-ERCC5R4GMW8 1640 aa25.26■■□□□ 1.63
LRP10-205ENST00000553002 SYNJ1O43426 1573 aa25.22■■□□□ 1.63
LRP10-205ENST00000553002 ABCA10Q8WWZ4 1543 aa25.21■■□□□ 1.63
LRP10-205ENST00000553002 GRIN2BQ13224 1484 aa25.15■■□□□ 1.62
LRP10-205ENST00000553002 GAPVD1Q14C86 1478 aa25.13■■□□□ 1.61
LRP10-205ENST00000553002 MAGI1Q96QZ7 1491 aaPredicted RBP25.09■■□□□ 1.61
LRP10-205ENST00000553002 SNAPC4Q5SXM2 1469 aa25.08■■□□□ 1.6
LRP10-205ENST00000553002 FBLN2P98095 1184 aa25.07■■□□□ 1.6
LRP10-205ENST00000553002 ABCA5Q8WWZ7 1642 aa25.07■■□□□ 1.6
LRP10-205ENST00000553002 CHMP7Q8WUX9 453 aaPredicted RBP25.03■■□□□ 1.6
LRP10-205ENST00000553002 PBRM1Q86U86 1689 aa25.01■■□□□ 1.59
LRP10-205ENST00000553002 CHD1O14646 1710 aa25■■□□□ 1.59
LRP10-205ENST00000553002 SYNJ2O15056 1496 aa24.99■■□□□ 1.59
LRP10-205ENST00000553002 ERICH3Q5RHP9 1530 aa24.91■■□□□ 1.58
LRP10-205ENST00000553002 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
LRP10-205ENST00000553002 KIF27Q86VH2 1401 aa24.86■■□□□ 1.57
LRP10-205ENST00000553002 ADAMTS12P58397 1594 aa24.84■■□□□ 1.57
LRP10-205ENST00000553002 GRIN2AQ12879 1464 aa24.81■■□□□ 1.56
LRP10-205ENST00000553002 CLASP1Q7Z460 1538 aa24.77■■□□□ 1.56
LRP10-205ENST00000553002 ARHGEF11O15085 1522 aa24.76■■□□□ 1.55
LRP10-205ENST00000553002 TRIM41Q8WV44 630 aa24.76■■□□□ 1.55
LRP10-205ENST00000553002 RIMBP3CA6NJZ7 1639 aa24.75■■□□□ 1.55
LRP10-205ENST00000553002 RIMBP3BA6NNM3 1639 aa24.75■■□□□ 1.55
LRP10-205ENST00000553002 RIMBP3Q9UFD9 1639 aa24.75■■□□□ 1.55
LRP10-205ENST00000553002 IGF1RP08069 1367 aa24.73■■□□□ 1.55
LRP10-205ENST00000553002 NUP160Q12769 1436 aa24.69■■□□□ 1.54
LRP10-205ENST00000553002 CUL7Q14999 1698 aa24.66■■□□□ 1.54
LRP10-205ENST00000553002 CEP170Q5SW79 1584 aa24.63■■□□□ 1.53
LRP10-205ENST00000553002 CARMIL1Q5VZK9 1371 aa24.6■■□□□ 1.53
LRP10-205ENST00000553002 CYB5RLQ6IPT4 315 aa24.58■■□□□ 1.53
LRP10-205ENST00000553002 ARAP1Q96P48 1450 aa24.54■■□□□ 1.52
LRP10-205ENST00000553002 RUSC2Q8N2Y8 1516 aa24.51■■□□□ 1.51
LRP10-205ENST00000553002 JPH4Q96JJ6 628 aa24.49■■□□□ 1.51
LRP10-205ENST00000553002 SHROOM2Q13796 1616 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms