RNA–Protein interactions for RNA: ENST00000552985.5

TPCN1-223, Transcript of two pore segment channel 1, humanhuman

TSL 3

Gene TPCN1, Length 762 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-223ENST00000552985 NISCHQ9Y2I1 1504 aa27.51■■■□□ 2
TPCN1-223ENST00000552985 CCDC180Q9P1Z9 1646 aa24.47■■□□□ 1.51
TPCN1-223ENST00000552985 ABCC9O60706 1549 aa24.05■■□□□ 1.44
TPCN1-223ENST00000552985 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
TPCN1-223ENST00000552985 NACADO15069 1562 aa23.01■■□□□ 1.27
TPCN1-223ENST00000552985 DCAF8L2P0C7V8 631 aa23.01■■□□□ 1.27
TPCN1-223ENST00000552985 ZCCHC6Q5VYS8 1495 aaKnown RBP22.91■■□□□ 1.26
TPCN1-223ENST00000552985 MYO15BQ96JP2 1530 aa22.84■■□□□ 1.25
TPCN1-223ENST00000552985 DCAF1Q9Y4B6 1507 aa22.72■■□□□ 1.23
TPCN1-223ENST00000552985 UNC13AQ9UPW8 1703 aa22.62■■□□□ 1.21
TPCN1-223ENST00000552985 PABPN1Q86U42 306 aaKnown RBP eCLIP22.47■■□□□ 1.19
TPCN1-223ENST00000552985 BICRAQ9NZM4 1560 aa22.42■■□□□ 1.18
TPCN1-223ENST00000552985 SCRIBQ14160 1630 aa22.37■■□□□ 1.17
TPCN1-223ENST00000552985 DNAJC5BQ9UF47 199 aa22.17■■□□□ 1.14
TPCN1-223ENST00000552985 SHROOM4Q9ULL8 1493 aa22.08■■□□□ 1.12
TPCN1-223ENST00000552985 EIF4G1Q04637 1599 aaKnown RBP21.8■■□□□ 1.08
TPCN1-223ENST00000552985 CC2D2AQ9P2K1 1620 aa21.74■■□□□ 1.07
TPCN1-223ENST00000552985 CECR2Q9BXF3 1484 aa21.59■■□□□ 1.05
TPCN1-223ENST00000552985 SMARCA4P51532 1647 aa21.37■■□□□ 1.01
TPCN1-223ENST00000552985 BAZ1AQ9NRL2 1556 aaPredicted RBP21.31■■□□□ 1
TPCN1-223ENST00000552985 ATAD2BQ9ULI0 1458 aa21.26■□□□□ 0.99
TPCN1-223ENST00000552985 NCAPD3P42695 1498 aa21.24■□□□□ 0.99
TPCN1-223ENST00000552985 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
TPCN1-223ENST00000552985 SMARCA2P51531 1590 aa21.21■□□□□ 0.99
TPCN1-223ENST00000552985 PEG3Q9GZU2 1588 aa21.14■□□□□ 0.98
TPCN1-223ENST00000552985 HMGXB3Q12766 1538 aa21.13■□□□□ 0.97
TPCN1-223ENST00000552985 BAZ1BQ9UIG0 1483 aaKnown RBP21.07■□□□□ 0.96
TPCN1-223ENST00000552985 WIZO95785 1651 aa21.01■□□□□ 0.95
TPCN1-223ENST00000552985 RSF1Q96T23 1441 aaPredicted RBP20.95■□□□□ 0.94
TPCN1-223ENST00000552985 NESP48681 1621 aa20.81■□□□□ 0.92
TPCN1-223ENST00000552985 TOP2AP11388 1531 aaKnown RBP20.74■□□□□ 0.91
TPCN1-223ENST00000552985 ERCC6Q03468 1493 aa20.69■□□□□ 0.9
TPCN1-223ENST00000552985 LAMC3Q9Y6N6 1575 aa20.68■□□□□ 0.9
TPCN1-223ENST00000552985 CADPSQ9ULU8 1353 aa20.62■□□□□ 0.89
TPCN1-223ENST00000552985 KIF21AQ7Z4S6 1674 aa20.56■□□□□ 0.88
TPCN1-223ENST00000552985 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
TPCN1-223ENST00000552985 CCDC88BA6NC98 1476 aa20.52■□□□□ 0.88
TPCN1-223ENST00000552985 CFTRP13569 1480 aa20.5■□□□□ 0.87
TPCN1-223ENST00000552985 THOC2Q8NI27 1593 aaKnown RBP20.49■□□□□ 0.87
TPCN1-223ENST00000552985 CUX2O14529 1486 aa20.48■□□□□ 0.87
TPCN1-223ENST00000552985 FANCD2Q9BXW9 1451 aa20.4■□□□□ 0.86
TPCN1-223ENST00000552985 SUPT5HO00267 1087 aaKnown RBP20.38■□□□□ 0.85
TPCN1-223ENST00000552985 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
TPCN1-223ENST00000552985 MRC2Q9UBG0 1479 aa20.36■□□□□ 0.85
TPCN1-223ENST00000552985 PRDM2Q13029 1718 aa20.36■□□□□ 0.85
TPCN1-223ENST00000552985 WDR62O43379 1518 aa20.29■□□□□ 0.84
TPCN1-223ENST00000552985 URB2Q14146 1524 aaKnown RBP20.22■□□□□ 0.83
TPCN1-223ENST00000552985 TOPBP1Q92547 1522 aa20.07■□□□□ 0.8
TPCN1-223ENST00000552985 DNMBPQ6XZF7 1577 aa20.04■□□□□ 0.8
TPCN1-223ENST00000552985 ABCC8Q09428 1581 aa20■□□□□ 0.79
TPCN1-223ENST00000552985 DNAJC5Q9H3Z4 198 aa19.95■□□□□ 0.78
TPCN1-223ENST00000552985 IFT140Q96RY7 1462 aa19.93■□□□□ 0.78
TPCN1-223ENST00000552985 CUX1P39880 1505 aa19.92■□□□□ 0.78
TPCN1-223ENST00000552985 ZNF608Q9ULD9 1512 aaPredicted RBP19.91■□□□□ 0.78
TPCN1-223ENST00000552985 POLA1P09884 1462 aaPredicted RBP19.9■□□□□ 0.78
TPCN1-223ENST00000552985 TARBP1Q13395 1621 aaKnown RBP19.87■□□□□ 0.77
TPCN1-223ENST00000552985 FGD5Q6ZNL6 1462 aa19.85■□□□□ 0.77
TPCN1-223ENST00000552985 RAD54L2Q9Y4B4 1467 aa19.84■□□□□ 0.77
TPCN1-223ENST00000552985 SOGA1O94964 1423 aa19.81■□□□□ 0.76
TPCN1-223ENST00000552985 EIF4G3O43432 1585 aaKnown RBP19.8■□□□□ 0.76
TPCN1-223ENST00000552985 AQRO60306 1485 aaKnown RBP eCLIP19.78■□□□□ 0.76
TPCN1-223ENST00000552985 WRNQ14191 1432 aaPredicted RBP eCLIP19.74■□□□□ 0.75
TPCN1-223ENST00000552985 SYNJ1O43426 1573 aa19.73■□□□□ 0.75
TPCN1-223ENST00000552985 TDRD9Q8NDG6 1382 aaKnown RBP19.72■□□□□ 0.75
TPCN1-223ENST00000552985 BIVM-ERCC5R4GMW8 1640 aa19.71■□□□□ 0.75
TPCN1-223ENST00000552985 TOP2BQ02880 1626 aa19.7■□□□□ 0.74
TPCN1-223ENST00000552985 WDR97A6NE52 1622 aa19.69■□□□□ 0.74
TPCN1-223ENST00000552985 ABCA10Q8WWZ4 1543 aa19.64■□□□□ 0.73
TPCN1-223ENST00000552985 OSCARQ8IYS5 282 aa19.62■□□□□ 0.73
TPCN1-223ENST00000552985 CHD1O14646 1710 aa19.59■□□□□ 0.73
TPCN1-223ENST00000552985 ABCA5Q8WWZ7 1642 aa19.58■□□□□ 0.73
TPCN1-223ENST00000552985 SNAPC4Q5SXM2 1469 aa19.58■□□□□ 0.72
TPCN1-223ENST00000552985 GRIN2BQ13224 1484 aa19.57■□□□□ 0.72
TPCN1-223ENST00000552985 GAPVD1Q14C86 1478 aa19.57■□□□□ 0.72
TPCN1-223ENST00000552985 PBRM1Q86U86 1689 aa19.56■□□□□ 0.72
TPCN1-223ENST00000552985 FBLN2P98095 1184 aa19.52■□□□□ 0.72
TPCN1-223ENST00000552985 MAGI1Q96QZ7 1491 aaPredicted RBP19.52■□□□□ 0.72
TPCN1-223ENST00000552985 SYNJ2O15056 1496 aa19.45■□□□□ 0.7
TPCN1-223ENST00000552985 CHMP7Q8WUX9 453 aaPredicted RBP19.44■□□□□ 0.7
TPCN1-223ENST00000552985 ADAMTS12P58397 1594 aa19.4■□□□□ 0.7
TPCN1-223ENST00000552985 ERICH3Q5RHP9 1530 aa19.39■□□□□ 0.69
TPCN1-223ENST00000552985 RIMBP3CA6NJZ7 1639 aa19.36■□□□□ 0.69
TPCN1-223ENST00000552985 RIMBP3BA6NNM3 1639 aa19.36■□□□□ 0.69
TPCN1-223ENST00000552985 RIMBP3Q9UFD9 1639 aa19.36■□□□□ 0.69
TPCN1-223ENST00000552985 CLASP1Q7Z460 1538 aa19.35■□□□□ 0.69
TPCN1-223ENST00000552985 ARHGEF11O15085 1522 aa19.34■□□□□ 0.69
TPCN1-223ENST00000552985 FHAD1B1AJZ9 1412 aa19.34■□□□□ 0.69
TPCN1-223ENST00000552985 GRIN2AQ12879 1464 aa19.33■□□□□ 0.68
TPCN1-223ENST00000552985 KIF27Q86VH2 1401 aa19.31■□□□□ 0.68
TPCN1-223ENST00000552985 TRIM41Q8WV44 630 aa19.29■□□□□ 0.68
TPCN1-223ENST00000552985 IGF1RP08069 1367 aa19.27■□□□□ 0.68
TPCN1-223ENST00000552985 CEP170Q5SW79 1584 aa19.27■□□□□ 0.67
TPCN1-223ENST00000552985 NUP160Q12769 1436 aa19.25■□□□□ 0.67
TPCN1-223ENST00000552985 ARAP1Q96P48 1450 aa19.2■□□□□ 0.66
TPCN1-223ENST00000552985 CUL7Q14999 1698 aa19.2■□□□□ 0.66
TPCN1-223ENST00000552985 RUSC2Q8N2Y8 1516 aa19.2■□□□□ 0.66
TPCN1-223ENST00000552985 CYB5RLQ6IPT4 315 aa19.16■□□□□ 0.66
TPCN1-223ENST00000552985 CARMIL1Q5VZK9 1371 aa19.15■□□□□ 0.66
TPCN1-223ENST00000552985 ERCC6L2Q5T890 1561 aa19.13■□□□□ 0.65
TPCN1-223ENST00000552985 SHROOM2Q13796 1616 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 265.8 ms