RNA–Protein interactions for RNA: ENST00000552879.5

LMBR1L-228, Transcript of limb development membrane protein 1 like, humanhuman

TSL 4

Gene LMBR1L, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-228ENST00000552879 NISCHQ9Y2I1 1504 aa29.07■■■□□ 2.24
LMBR1L-228ENST00000552879 CCDC180Q9P1Z9 1646 aa25.77■■□□□ 1.72
LMBR1L-228ENST00000552879 ABCC9O60706 1549 aa25.35■■□□□ 1.65
LMBR1L-228ENST00000552879 DCAF8L2P0C7V8 631 aa24.29■■□□□ 1.48
LMBR1L-228ENST00000552879 RB1CC1Q8TDY2 1594 aa24.29■■□□□ 1.48
LMBR1L-228ENST00000552879 NACADO15069 1562 aa24.27■■□□□ 1.48
LMBR1L-228ENST00000552879 ZCCHC6Q5VYS8 1495 aaKnown RBP24.21■■□□□ 1.47
LMBR1L-228ENST00000552879 MYO15BQ96JP2 1530 aa24.14■■□□□ 1.45
LMBR1L-228ENST00000552879 DCAF1Q9Y4B6 1507 aa24.03■■□□□ 1.44
LMBR1L-228ENST00000552879 UNC13AQ9UPW8 1703 aa23.76■■□□□ 1.39
LMBR1L-228ENST00000552879 PABPN1Q86U42 306 aaKnown RBP eCLIP23.73■■□□□ 1.393e-7■■■□□ 17
LMBR1L-228ENST00000552879 BICRAQ9NZM4 1560 aa23.66■■□□□ 1.38
LMBR1L-228ENST00000552879 SCRIBQ14160 1630 aa23.56■■□□□ 1.36
LMBR1L-228ENST00000552879 DNAJC5BQ9UF47 199 aa23.44■■□□□ 1.34
LMBR1L-228ENST00000552879 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
LMBR1L-228ENST00000552879 EIF4G1Q04637 1599 aaKnown RBP22.99■■□□□ 1.27
LMBR1L-228ENST00000552879 CC2D2AQ9P2K1 1620 aa22.9■■□□□ 1.26
LMBR1L-228ENST00000552879 CECR2Q9BXF3 1484 aa22.77■■□□□ 1.24
LMBR1L-228ENST00000552879 SMARCA4P51532 1647 aa22.53■■□□□ 1.2
LMBR1L-228ENST00000552879 BAZ1AQ9NRL2 1556 aaPredicted RBP22.48■■□□□ 1.19
LMBR1L-228ENST00000552879 ATAD2BQ9ULI0 1458 aa22.47■■□□□ 1.19
LMBR1L-228ENST00000552879 NCAPD3P42695 1498 aa22.46■■□□□ 1.19
LMBR1L-228ENST00000552879 MROH2BQ7Z745 1585 aa22.44■■□□□ 1.18
LMBR1L-228ENST00000552879 SMARCA2P51531 1590 aa22.36■■□□□ 1.17
LMBR1L-228ENST00000552879 PEG3Q9GZU2 1588 aa22.33■■□□□ 1.16
LMBR1L-228ENST00000552879 HMGXB3Q12766 1538 aa22.29■■□□□ 1.16
LMBR1L-228ENST00000552879 BAZ1BQ9UIG0 1483 aaKnown RBP22.22■■□□□ 1.15
LMBR1L-228ENST00000552879 RSF1Q96T23 1441 aaPredicted RBP22.17■■□□□ 1.14
LMBR1L-228ENST00000552879 WIZO95785 1651 aa22.16■■□□□ 1.14
LMBR1L-228ENST00000552879 NESP48681 1621 aa21.96■■□□□ 1.11
LMBR1L-228ENST00000552879 TOP2AP11388 1531 aaKnown RBP21.9■■□□□ 1.1
LMBR1L-228ENST00000552879 LAMC3Q9Y6N6 1575 aa21.8■■□□□ 1.08
LMBR1L-228ENST00000552879 CADPSQ9ULU8 1353 aa21.8■■□□□ 1.08
LMBR1L-228ENST00000552879 ERCC6Q03468 1493 aa21.77■■□□□ 1.08
LMBR1L-228ENST00000552879 CCDC88BA6NC98 1476 aa21.7■■□□□ 1.06
LMBR1L-228ENST00000552879 PDS5BQ9NTI5 1447 aa21.67■■□□□ 1.06
LMBR1L-228ENST00000552879 CFTRP13569 1480 aa21.66■■□□□ 1.06
LMBR1L-228ENST00000552879 KIF21AQ7Z4S6 1674 aa21.61■■□□□ 1.05
LMBR1L-228ENST00000552879 CUX2O14529 1486 aa21.58■■□□□ 1.05
LMBR1L-228ENST00000552879 THOC2Q8NI27 1593 aaKnown RBP21.58■■□□□ 1.05
LMBR1L-228ENST00000552879 SUPT5HO00267 1087 aaKnown RBP21.55■■□□□ 1.04
LMBR1L-228ENST00000552879 FANCD2Q9BXW9 1451 aa21.52■■□□□ 1.04
LMBR1L-228ENST00000552879 MRC2Q9UBG0 1479 aa21.46■■□□□ 1.03
LMBR1L-228ENST00000552879 CEP164Q9UPV0 1460 aa21.46■■□□□ 1.03
LMBR1L-228ENST00000552879 WDR62O43379 1518 aa21.4■■□□□ 1.02
LMBR1L-228ENST00000552879 PRDM2Q13029 1718 aa21.35■■□□□ 1.01
LMBR1L-228ENST00000552879 URB2Q14146 1524 aaKnown RBP21.35■■□□□ 1.01
LMBR1L-228ENST00000552879 TOPBP1Q92547 1522 aa21.19■□□□□ 0.98
LMBR1L-228ENST00000552879 DNMBPQ6XZF7 1577 aa21.12■□□□□ 0.97
LMBR1L-228ENST00000552879 ABCC8Q09428 1581 aa21.11■□□□□ 0.97
LMBR1L-228ENST00000552879 DNAJC5Q9H3Z4 198 aa21.05■□□□□ 0.96
LMBR1L-228ENST00000552879 IFT140Q96RY7 1462 aa21.04■□□□□ 0.96
LMBR1L-228ENST00000552879 CUX1P39880 1505 aa21.04■□□□□ 0.96
LMBR1L-228ENST00000552879 ZNF608Q9ULD9 1512 aaPredicted RBP21.02■□□□□ 0.96
LMBR1L-228ENST00000552879 POLA1P09884 1462 aaPredicted RBP21.01■□□□□ 0.95
LMBR1L-228ENST00000552879 TARBP1Q13395 1621 aaKnown RBP20.96■□□□□ 0.95
LMBR1L-228ENST00000552879 RAD54L2Q9Y4B4 1467 aa20.95■□□□□ 0.94
LMBR1L-228ENST00000552879 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
LMBR1L-228ENST00000552879 SOGA1O94964 1423 aa20.92■□□□□ 0.94
LMBR1L-228ENST00000552879 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.933e-7■■■■■ 27.8
LMBR1L-228ENST00000552879 EIF4G3O43432 1585 aaKnown RBP20.85■□□□□ 0.93
LMBR1L-228ENST00000552879 WRNQ14191 1432 aaPredicted RBP eCLIP20.85■□□□□ 0.93
LMBR1L-228ENST00000552879 TDRD9Q8NDG6 1382 aaKnown RBP20.84■□□□□ 0.93
LMBR1L-228ENST00000552879 SYNJ1O43426 1573 aa20.83■□□□□ 0.92
LMBR1L-228ENST00000552879 TOP2BQ02880 1626 aa20.8■□□□□ 0.92
LMBR1L-228ENST00000552879 BIVM-ERCC5R4GMW8 1640 aa20.78■□□□□ 0.92
LMBR1L-228ENST00000552879 WDR97A6NE52 1622 aa20.75■□□□□ 0.91
LMBR1L-228ENST00000552879 ABCA10Q8WWZ4 1543 aa20.74■□□□□ 0.91
LMBR1L-228ENST00000552879 OSCARQ8IYS5 282 aa20.72■□□□□ 0.91
LMBR1L-228ENST00000552879 GRIN2BQ13224 1484 aa20.66■□□□□ 0.9
LMBR1L-228ENST00000552879 GAPVD1Q14C86 1478 aa20.66■□□□□ 0.9
LMBR1L-228ENST00000552879 ABCA5Q8WWZ7 1642 aa20.65■□□□□ 0.9
LMBR1L-228ENST00000552879 SNAPC4Q5SXM2 1469 aa20.65■□□□□ 0.9
LMBR1L-228ENST00000552879 MAGI1Q96QZ7 1491 aaPredicted RBP20.59■□□□□ 0.89
LMBR1L-228ENST00000552879 FBLN2P98095 1184 aa20.58■□□□□ 0.89
LMBR1L-228ENST00000552879 CHD1O14646 1710 aa20.58■□□□□ 0.88
LMBR1L-228ENST00000552879 PBRM1Q86U86 1689 aa20.56■□□□□ 0.88
LMBR1L-228ENST00000552879 SYNJ2O15056 1496 aa20.53■□□□□ 0.88
LMBR1L-228ENST00000552879 CHMP7Q8WUX9 453 aaPredicted RBP20.52■□□□□ 0.88
LMBR1L-228ENST00000552879 ERICH3Q5RHP9 1530 aa20.46■□□□□ 0.87
LMBR1L-228ENST00000552879 ADAMTS12P58397 1594 aa20.44■□□□□ 0.86
LMBR1L-228ENST00000552879 FHAD1B1AJZ9 1412 aa20.43■□□□□ 0.86
LMBR1L-228ENST00000552879 CLASP1Q7Z460 1538 aa20.42■□□□□ 0.86
LMBR1L-228ENST00000552879 IGF1RP08069 1367 aa20.41■□□□□ 0.86
LMBR1L-228ENST00000552879 GRIN2AQ12879 1464 aa20.39■□□□□ 0.85
LMBR1L-228ENST00000552879 KIF27Q86VH2 1401 aa20.39■□□□□ 0.85
LMBR1L-228ENST00000552879 RIMBP3CA6NJZ7 1639 aa20.38■□□□□ 0.85
LMBR1L-228ENST00000552879 RIMBP3BA6NNM3 1639 aa20.38■□□□□ 0.85
LMBR1L-228ENST00000552879 RIMBP3Q9UFD9 1639 aa20.38■□□□□ 0.85
LMBR1L-228ENST00000552879 ARHGEF11O15085 1522 aa20.38■□□□□ 0.85
LMBR1L-228ENST00000552879 NUP160Q12769 1436 aa20.34■□□□□ 0.85
LMBR1L-228ENST00000552879 TRIM41Q8WV44 630 aa20.32■□□□□ 0.84
LMBR1L-228ENST00000552879 CEP170Q5SW79 1584 aa20.32■□□□□ 0.84
LMBR1L-228ENST00000552879 RUSC2Q8N2Y8 1516 aa20.32■□□□□ 0.84
LMBR1L-228ENST00000552879 ARAP1Q96P48 1450 aa20.24■□□□□ 0.83
LMBR1L-228ENST00000552879 CARMIL1Q5VZK9 1371 aa20.23■□□□□ 0.83
LMBR1L-228ENST00000552879 CUL7Q14999 1698 aa20.22■□□□□ 0.83
LMBR1L-228ENST00000552879 CYB5RLQ6IPT4 315 aa20.21■□□□□ 0.83
LMBR1L-228ENST00000552879 ERCC6L2Q5T890 1561 aa20.18■□□□□ 0.82
LMBR1L-228ENST00000552879 SHROOM2Q13796 1616 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms