RNA–Protein interactions for RNA: ENST00000552794.1

PPHLN1-222, Transcript of periphilin 1, humanhuman

TSL 4

Gene PPHLN1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPHLN1-222ENST00000552794 NISCHQ9Y2I1 1504 aa49.44■■■■■ 5.5
PPHLN1-222ENST00000552794 CCDC180Q9P1Z9 1646 aa44.29■■■■■ 4.68
PPHLN1-222ENST00000552794 ABCC9O60706 1549 aa43.96■■■■■ 4.63
PPHLN1-222ENST00000552794 RB1CC1Q8TDY2 1594 aa42.04■■■■■ 4.32
PPHLN1-222ENST00000552794 NACADO15069 1562 aa41.83■■■■■ 4.29
PPHLN1-222ENST00000552794 DCAF8L2P0C7V8 631 aa41.62■■■■■ 4.25
PPHLN1-222ENST00000552794 MYO15BQ96JP2 1530 aa41.36■■■■■ 4.21
PPHLN1-222ENST00000552794 ZCCHC6Q5VYS8 1495 aaKnown RBP41.04■■■■■ 4.16
PPHLN1-222ENST00000552794 UNC13AQ9UPW8 1703 aa40.93■■■■■ 4.14
PPHLN1-222ENST00000552794 PABPN1Q86U42 306 aaKnown RBP eCLIP40.93■■■■■ 4.14
PPHLN1-222ENST00000552794 DCAF1Q9Y4B6 1507 aa40.91■■■■■ 4.14
PPHLN1-222ENST00000552794 DNAJC5BQ9UF47 199 aa40.85■■■■■ 4.13
PPHLN1-222ENST00000552794 BICRAQ9NZM4 1560 aa40.67■■■■■ 4.1
PPHLN1-222ENST00000552794 SHROOM4Q9ULL8 1493 aa40.37■■■■■ 4.05
PPHLN1-222ENST00000552794 SCRIBQ14160 1630 aa40.31■■■■■ 4.04
PPHLN1-222ENST00000552794 EIF4G1Q04637 1599 aaKnown RBP39.73■■■■□ 3.95
PPHLN1-222ENST00000552794 CC2D2AQ9P2K1 1620 aa39.72■■■■□ 3.95
PPHLN1-222ENST00000552794 CECR2Q9BXF3 1484 aa39.61■■■■□ 3.93
PPHLN1-222ENST00000552794 NCAPD3P42695 1498 aa38.58■■■■□ 3.77
PPHLN1-222ENST00000552794 SMARCA4P51532 1647 aa38.5■■■■□ 3.75
PPHLN1-222ENST00000552794 ATAD2BQ9ULI0 1458 aa38.47■■■■□ 3.75
PPHLN1-222ENST00000552794 SMARCA2P51531 1590 aa38.46■■■■□ 3.75
PPHLN1-222ENST00000552794 BAZ1AQ9NRL2 1556 aaPredicted RBP38.41■■■■□ 3.74
PPHLN1-222ENST00000552794 HMGXB3Q12766 1538 aa38.34■■■■□ 3.73
PPHLN1-222ENST00000552794 BAZ1BQ9UIG0 1483 aaKnown RBP38.17■■■■□ 3.7
PPHLN1-222ENST00000552794 PEG3Q9GZU2 1588 aa38.15■■■■□ 3.7
PPHLN1-222ENST00000552794 MROH2BQ7Z745 1585 aa38.04■■■■□ 3.68
PPHLN1-222ENST00000552794 ERCC6Q03468 1493 aa38.03■■■■□ 3.68
PPHLN1-222ENST00000552794 CUX2O14529 1486 aa37.86■■■■□ 3.65
PPHLN1-222ENST00000552794 NESP48681 1621 aa37.79■■■■□ 3.64
PPHLN1-222ENST00000552794 LAMC3Q9Y6N6 1575 aa37.69■■■■□ 3.62
PPHLN1-222ENST00000552794 WIZO95785 1651 aa37.58■■■■□ 3.61
PPHLN1-222ENST00000552794 PDS5BQ9NTI5 1447 aa37.5■■■■□ 3.59
PPHLN1-222ENST00000552794 DNAJC5Q9H3Z4 198 aa37.45■■■■□ 3.59
PPHLN1-222ENST00000552794 CADPSQ9ULU8 1353 aa37.42■■■■□ 3.58
PPHLN1-222ENST00000552794 THOC2Q8NI27 1593 aaKnown RBP37.4■■■■□ 3.58
PPHLN1-222ENST00000552794 RSF1Q96T23 1441 aaPredicted RBP37.38■■■■□ 3.57
PPHLN1-222ENST00000552794 KIF21AQ7Z4S6 1674 aa37.33■■■■□ 3.57
PPHLN1-222ENST00000552794 TOP2AP11388 1531 aaKnown RBP37.22■■■■□ 3.55
PPHLN1-222ENST00000552794 MRC2Q9UBG0 1479 aa37.12■■■■□ 3.53
PPHLN1-222ENST00000552794 CFTRP13569 1480 aa37.05■■■■□ 3.52
PPHLN1-222ENST00000552794 CEP164Q9UPV0 1460 aa37.05■■■■□ 3.52
PPHLN1-222ENST00000552794 FANCD2Q9BXW9 1451 aa37■■■■□ 3.51
PPHLN1-222ENST00000552794 WDR62O43379 1518 aa37■■■■□ 3.51
PPHLN1-222ENST00000552794 CCDC88BA6NC98 1476 aa36.74■■■■□ 3.47
PPHLN1-222ENST00000552794 PRDM2Q13029 1718 aa36.69■■■■□ 3.46
PPHLN1-222ENST00000552794 URB2Q14146 1524 aaKnown RBP36.61■■■■□ 3.45
PPHLN1-222ENST00000552794 ABCC8Q09428 1581 aa36.35■■■■□ 3.41
PPHLN1-222ENST00000552794 TOPBP1Q92547 1522 aa36.31■■■■□ 3.4
PPHLN1-222ENST00000552794 IFT140Q96RY7 1462 aa36.3■■■■□ 3.4
PPHLN1-222ENST00000552794 DNMBPQ6XZF7 1577 aa36.23■■■■□ 3.39
PPHLN1-222ENST00000552794 OSCARQ8IYS5 282 aa36.17■■■■□ 3.38
PPHLN1-222ENST00000552794 ZNF608Q9ULD9 1512 aaPredicted RBP36.1■■■■□ 3.37
PPHLN1-222ENST00000552794 EIF4G3O43432 1585 aaKnown RBP35.98■■■■□ 3.35
PPHLN1-222ENST00000552794 POLA1P09884 1462 aaPredicted RBP35.96■■■■□ 3.35
PPHLN1-222ENST00000552794 SUPT5HO00267 1087 aaKnown RBP35.95■■■■□ 3.35
PPHLN1-222ENST00000552794 TRIM41Q8WV44 630 aa35.93■■■■□ 3.34
PPHLN1-222ENST00000552794 TARBP1Q13395 1621 aaKnown RBP35.92■■■■□ 3.34
PPHLN1-222ENST00000552794 AQRO60306 1485 aaKnown RBP eCLIP35.83■■■■□ 3.33
PPHLN1-222ENST00000552794 SOGA1O94964 1423 aa35.82■■■■□ 3.32
PPHLN1-222ENST00000552794 FGD5Q6ZNL6 1462 aa35.78■■■■□ 3.32
PPHLN1-222ENST00000552794 RAD54L2Q9Y4B4 1467 aa35.76■■■■□ 3.32
PPHLN1-222ENST00000552794 CUX1P39880 1505 aa35.74■■■■□ 3.31
PPHLN1-222ENST00000552794 WDR97A6NE52 1622 aa35.71■■■■□ 3.31
PPHLN1-222ENST00000552794 TDRD9Q8NDG6 1382 aaKnown RBP35.67■■■■□ 3.3
PPHLN1-222ENST00000552794 CHD1O14646 1710 aa35.61■■■■□ 3.29
PPHLN1-222ENST00000552794 FBLN2P98095 1184 aa35.61■■■■□ 3.29
PPHLN1-222ENST00000552794 RIMBP3CA6NJZ7 1639 aa35.58■■■■□ 3.29
PPHLN1-222ENST00000552794 RIMBP3BA6NNM3 1639 aa35.58■■■■□ 3.29
PPHLN1-222ENST00000552794 RIMBP3Q9UFD9 1639 aa35.58■■■■□ 3.29
PPHLN1-222ENST00000552794 ARHGEF11O15085 1522 aa35.54■■■■□ 3.28
PPHLN1-222ENST00000552794 SNAPC4Q5SXM2 1469 aa35.51■■■■□ 3.28
PPHLN1-222ENST00000552794 GRIN2BQ13224 1484 aa35.5■■■■□ 3.27
PPHLN1-222ENST00000552794 MAGI1Q96QZ7 1491 aaPredicted RBP35.5■■■■□ 3.27
PPHLN1-222ENST00000552794 CHMP7Q8WUX9 453 aaPredicted RBP35.42■■■■□ 3.26
PPHLN1-222ENST00000552794 ABCA10Q8WWZ4 1543 aa35.4■■■■□ 3.26
PPHLN1-222ENST00000552794 GAPVD1Q14C86 1478 aa35.4■■■■□ 3.26
PPHLN1-222ENST00000552794 WRNQ14191 1432 aaPredicted RBP eCLIP35.36■■■■□ 3.25
PPHLN1-222ENST00000552794 SYNJ2O15056 1496 aa35.35■■■■□ 3.25
PPHLN1-222ENST00000552794 SYNJ1O43426 1573 aa35.33■■■■□ 3.25
PPHLN1-222ENST00000552794 PBRM1Q86U86 1689 aa35.31■■■■□ 3.24
PPHLN1-222ENST00000552794 ABCA5Q8WWZ7 1642 aa35.29■■■■□ 3.24
PPHLN1-222ENST00000552794 TOP2BQ02880 1626 aa35.28■■■■□ 3.24
PPHLN1-222ENST00000552794 BIVM-ERCC5R4GMW8 1640 aa35.28■■■■□ 3.24
PPHLN1-222ENST00000552794 CYB5RLQ6IPT4 315 aa35.26■■■■□ 3.24
PPHLN1-222ENST00000552794 CLASP1Q7Z460 1538 aa35.23■■■■□ 3.23
PPHLN1-222ENST00000552794 ARAP1Q96P48 1450 aa35.18■■■■□ 3.22
PPHLN1-222ENST00000552794 GRIN2AQ12879 1464 aa35.03■■■■□ 3.2
PPHLN1-222ENST00000552794 ADAMTS12P58397 1594 aa35.02■■■■□ 3.2
PPHLN1-222ENST00000552794 ERICH3Q5RHP9 1530 aa34.99■■■■□ 3.19
PPHLN1-222ENST00000552794 FHAD1B1AJZ9 1412 aa34.98■■■■□ 3.19
PPHLN1-222ENST00000552794 NUP160Q12769 1436 aa34.89■■■■□ 3.18
PPHLN1-222ENST00000552794 CEP170Q5SW79 1584 aa34.83■■■■□ 3.17
PPHLN1-222ENST00000552794 TRHP20396 242 aaPredicted RBP34.83■■■■□ 3.17
PPHLN1-222ENST00000552794 KIF27Q86VH2 1401 aa34.68■■■■□ 3.14
PPHLN1-222ENST00000552794 SHROOM2Q13796 1616 aa34.67■■■■□ 3.14
PPHLN1-222ENST00000552794 ERCC6L2Q5T890 1561 aa34.62■■■■□ 3.13
PPHLN1-222ENST00000552794 CUL7Q14999 1698 aa34.54■■■■□ 3.12
PPHLN1-222ENST00000552794 IGF1RP08069 1367 aa34.53■■■■□ 3.12
PPHLN1-222ENST00000552794 JPH4Q96JJ6 628 aa34.53■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms