RNA–Protein interactions for RNA: ENST00000552678.1

ACVRL1-208, Transcript of activin A receptor like type 1, humanhuman

TSL 2

Gene ACVRL1, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACVRL1-208ENST00000552678 NISCHQ9Y2I1 1504 aa45.44■■■■■ 4.86
ACVRL1-208ENST00000552678 CCDC180Q9P1Z9 1646 aa40.54■■■■■ 4.08
ACVRL1-208ENST00000552678 ABCC9O60706 1549 aa40.35■■■■■ 4.05
ACVRL1-208ENST00000552678 RB1CC1Q8TDY2 1594 aa38.43■■■■□ 3.74
ACVRL1-208ENST00000552678 DCAF8L2P0C7V8 631 aa38.31■■■■□ 3.72
ACVRL1-208ENST00000552678 NACADO15069 1562 aa38.23■■■■□ 3.71
ACVRL1-208ENST00000552678 MYO15BQ96JP2 1530 aa37.75■■■■□ 3.63
ACVRL1-208ENST00000552678 ZCCHC6Q5VYS8 1495 aaKnown RBP37.72■■■■□ 3.63
ACVRL1-208ENST00000552678 UNC13AQ9UPW8 1703 aa37.72■■■■□ 3.63
ACVRL1-208ENST00000552678 PABPN1Q86U42 306 aaKnown RBP eCLIP37.68■■■■□ 3.62
ACVRL1-208ENST00000552678 DNAJC5BQ9UF47 199 aa37.63■■■■□ 3.61
ACVRL1-208ENST00000552678 DCAF1Q9Y4B6 1507 aa37.45■■■■□ 3.59
ACVRL1-208ENST00000552678 BICRAQ9NZM4 1560 aa37.42■■■■□ 3.58
ACVRL1-208ENST00000552678 SCRIBQ14160 1630 aa37.11■■■■□ 3.53
ACVRL1-208ENST00000552678 SHROOM4Q9ULL8 1493 aa36.68■■■■□ 3.46
ACVRL1-208ENST00000552678 CC2D2AQ9P2K1 1620 aa36.44■■■■□ 3.42
ACVRL1-208ENST00000552678 EIF4G1Q04637 1599 aaKnown RBP36.41■■■■□ 3.42
ACVRL1-208ENST00000552678 CECR2Q9BXF3 1484 aa36.24■■■■□ 3.39
ACVRL1-208ENST00000552678 SMARCA4P51532 1647 aa35.38■■■■□ 3.25
ACVRL1-208ENST00000552678 NCAPD3P42695 1498 aa35.32■■■■□ 3.24
ACVRL1-208ENST00000552678 ATAD2BQ9ULI0 1458 aa35.32■■■■□ 3.24
ACVRL1-208ENST00000552678 BAZ1AQ9NRL2 1556 aaPredicted RBP35.19■■■■□ 3.22
ACVRL1-208ENST00000552678 SMARCA2P51531 1590 aa35.15■■■■□ 3.22
ACVRL1-208ENST00000552678 MROH2BQ7Z745 1585 aa35.09■■■■□ 3.21
ACVRL1-208ENST00000552678 HMGXB3Q12766 1538 aa35.06■■■■□ 3.2
ACVRL1-208ENST00000552678 BAZ1BQ9UIG0 1483 aaKnown RBP34.97■■■■□ 3.19
ACVRL1-208ENST00000552678 PEG3Q9GZU2 1588 aa34.96■■■■□ 3.19
ACVRL1-208ENST00000552678 NESP48681 1621 aa34.81■■■■□ 3.16
ACVRL1-208ENST00000552678 WIZO95785 1651 aa34.72■■■■□ 3.15
ACVRL1-208ENST00000552678 ERCC6Q03468 1493 aa34.71■■■■□ 3.15
ACVRL1-208ENST00000552678 RSF1Q96T23 1441 aaPredicted RBP34.46■■■■□ 3.11
ACVRL1-208ENST00000552678 CUX2O14529 1486 aa34.46■■■■□ 3.11
ACVRL1-208ENST00000552678 LAMC3Q9Y6N6 1575 aa34.45■■■■□ 3.11
ACVRL1-208ENST00000552678 KIF21AQ7Z4S6 1674 aa34.34■■■■□ 3.09
ACVRL1-208ENST00000552678 THOC2Q8NI27 1593 aaKnown RBP34.3■■■■□ 3.08
ACVRL1-208ENST00000552678 CADPSQ9ULU8 1353 aa34.28■■■■□ 3.08
ACVRL1-208ENST00000552678 PDS5BQ9NTI5 1447 aa34.22■■■■□ 3.07
ACVRL1-208ENST00000552678 TOP2AP11388 1531 aaKnown RBP34.19■■■■□ 3.06
ACVRL1-208ENST00000552678 DNAJC5Q9H3Z4 198 aa34.12■■■■□ 3.05
ACVRL1-208ENST00000552678 CFTRP13569 1480 aa33.96■■■■□ 3.03
ACVRL1-208ENST00000552678 MRC2Q9UBG0 1479 aa33.95■■■■□ 3.03
ACVRL1-208ENST00000552678 FANCD2Q9BXW9 1451 aa33.92■■■■□ 3.02
ACVRL1-208ENST00000552678 CEP164Q9UPV0 1460 aa33.88■■■■□ 3.01
ACVRL1-208ENST00000552678 CCDC88BA6NC98 1476 aa33.87■■■■□ 3.01
ACVRL1-208ENST00000552678 WDR62O43379 1518 aa33.86■■■■□ 3.01
ACVRL1-208ENST00000552678 URB2Q14146 1524 aaKnown RBP33.67■■■□□ 2.98
ACVRL1-208ENST00000552678 PRDM2Q13029 1718 aa33.67■■■□□ 2.98
ACVRL1-208ENST00000552678 TOPBP1Q92547 1522 aa33.33■■■□□ 2.93
ACVRL1-208ENST00000552678 SUPT5HO00267 1087 aaKnown RBP33.3■■■□□ 2.92
ACVRL1-208ENST00000552678 ZNF608Q9ULD9 1512 aaPredicted RBP33.23■■■□□ 2.91
ACVRL1-208ENST00000552678 DNMBPQ6XZF7 1577 aa33.21■■■□□ 2.91
ACVRL1-208ENST00000552678 IFT140Q96RY7 1462 aa33.18■■■□□ 2.9
ACVRL1-208ENST00000552678 ABCC8Q09428 1581 aa33.15■■■□□ 2.9
ACVRL1-208ENST00000552678 TARBP1Q13395 1621 aaKnown RBP33.02■■■□□ 2.88
ACVRL1-208ENST00000552678 POLA1P09884 1462 aaPredicted RBP33.01■■■□□ 2.88
ACVRL1-208ENST00000552678 EIF4G3O43432 1585 aaKnown RBP33■■■□□ 2.87
ACVRL1-208ENST00000552678 OSCARQ8IYS5 282 aa33■■■□□ 2.87
ACVRL1-208ENST00000552678 RAD54L2Q9Y4B4 1467 aa32.97■■■□□ 2.87
ACVRL1-208ENST00000552678 AQRO60306 1485 aaKnown RBP eCLIP32.96■■■□□ 2.87
ACVRL1-208ENST00000552678 CUX1P39880 1505 aa32.93■■■□□ 2.86
ACVRL1-208ENST00000552678 FGD5Q6ZNL6 1462 aa32.87■■■□□ 2.85
ACVRL1-208ENST00000552678 SOGA1O94964 1423 aa32.87■■■□□ 2.85
ACVRL1-208ENST00000552678 TRIM41Q8WV44 630 aa32.87■■■□□ 2.85
ACVRL1-208ENST00000552678 TDRD9Q8NDG6 1382 aaKnown RBP32.81■■■□□ 2.84
ACVRL1-208ENST00000552678 CHD1O14646 1710 aa32.73■■■□□ 2.83
ACVRL1-208ENST00000552678 FBLN2P98095 1184 aa32.65■■■□□ 2.82
ACVRL1-208ENST00000552678 WDR97A6NE52 1622 aa32.62■■■□□ 2.81
ACVRL1-208ENST00000552678 RIMBP3CA6NJZ7 1639 aa32.62■■■□□ 2.81
ACVRL1-208ENST00000552678 RIMBP3BA6NNM3 1639 aa32.62■■■□□ 2.81
ACVRL1-208ENST00000552678 RIMBP3Q9UFD9 1639 aa32.62■■■□□ 2.81
ACVRL1-208ENST00000552678 SNAPC4Q5SXM2 1469 aa32.6■■■□□ 2.81
ACVRL1-208ENST00000552678 ARHGEF11O15085 1522 aa32.51■■■□□ 2.8
ACVRL1-208ENST00000552678 SYNJ1O43426 1573 aa32.5■■■□□ 2.79
ACVRL1-208ENST00000552678 GRIN2BQ13224 1484 aa32.49■■■□□ 2.79
ACVRL1-208ENST00000552678 PBRM1Q86U86 1689 aa32.46■■■□□ 2.79
ACVRL1-208ENST00000552678 ABCA10Q8WWZ4 1543 aa32.46■■■□□ 2.79
ACVRL1-208ENST00000552678 WRNQ14191 1432 aaPredicted RBP eCLIP32.46■■■□□ 2.79
ACVRL1-208ENST00000552678 GAPVD1Q14C86 1478 aa32.46■■■□□ 2.79
ACVRL1-208ENST00000552678 BIVM-ERCC5R4GMW8 1640 aa32.45■■■□□ 2.79
ACVRL1-208ENST00000552678 TOP2BQ02880 1626 aa32.44■■■□□ 2.78
ACVRL1-208ENST00000552678 MAGI1Q96QZ7 1491 aaPredicted RBP32.42■■■□□ 2.78
ACVRL1-208ENST00000552678 ABCA5Q8WWZ7 1642 aa32.42■■■□□ 2.78
ACVRL1-208ENST00000552678 CHMP7Q8WUX9 453 aaPredicted RBP32.41■■■□□ 2.78
ACVRL1-208ENST00000552678 SYNJ2O15056 1496 aa32.34■■■□□ 2.77
ACVRL1-208ENST00000552678 CLASP1Q7Z460 1538 aa32.31■■■□□ 2.76
ACVRL1-208ENST00000552678 CYB5RLQ6IPT4 315 aa32.3■■■□□ 2.76
ACVRL1-208ENST00000552678 ARAP1Q96P48 1450 aa32.25■■■□□ 2.75
ACVRL1-208ENST00000552678 ADAMTS12P58397 1594 aa32.15■■■□□ 2.74
ACVRL1-208ENST00000552678 GRIN2AQ12879 1464 aa32.1■■■□□ 2.73
ACVRL1-208ENST00000552678 CEP170Q5SW79 1584 aa32.04■■■□□ 2.72
ACVRL1-208ENST00000552678 ERICH3Q5RHP9 1530 aa32.04■■■□□ 2.72
ACVRL1-208ENST00000552678 FHAD1B1AJZ9 1412 aa32.03■■■□□ 2.72
ACVRL1-208ENST00000552678 NUP160Q12769 1436 aa31.97■■■□□ 2.71
ACVRL1-208ENST00000552678 ERCC6L2Q5T890 1561 aa31.96■■■□□ 2.71
ACVRL1-208ENST00000552678 SHROOM2Q13796 1616 aa31.8■■■□□ 2.68
ACVRL1-208ENST00000552678 TRHP20396 242 aaPredicted RBP31.8■■■□□ 2.68
ACVRL1-208ENST00000552678 IGF1RP08069 1367 aa31.8■■■□□ 2.68
ACVRL1-208ENST00000552678 KIF27Q86VH2 1401 aa31.77■■■□□ 2.68
ACVRL1-208ENST00000552678 RUSC2Q8N2Y8 1516 aa31.69■■■□□ 2.66
ACVRL1-208ENST00000552678 JPH4Q96JJ6 628 aa31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms