RNA–Protein interactions for RNA: ENST00000552429.5

PPHLN1-220, Transcript of periphilin 1, humanhuman

TSL 2

Gene PPHLN1, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPHLN1-220ENST00000552429 NISCHQ9Y2I1 1504 aa30.94■■■□□ 2.54
PPHLN1-220ENST00000552429 CCDC180Q9P1Z9 1646 aa27.56■■■□□ 2
PPHLN1-220ENST00000552429 ABCC9O60706 1549 aa27.01■■□□□ 1.91
PPHLN1-220ENST00000552429 DCAF8L2P0C7V8 631 aa26.02■■□□□ 1.76
PPHLN1-220ENST00000552429 RB1CC1Q8TDY2 1594 aa26.01■■□□□ 1.75
PPHLN1-220ENST00000552429 NACADO15069 1562 aa25.96■■□□□ 1.75
PPHLN1-220ENST00000552429 MYO15BQ96JP2 1530 aa25.77■■□□□ 1.72
PPHLN1-220ENST00000552429 ZCCHC6Q5VYS8 1495 aaKnown RBP25.72■■□□□ 1.71
PPHLN1-220ENST00000552429 DCAF1Q9Y4B6 1507 aa25.62■■□□□ 1.69
PPHLN1-220ENST00000552429 UNC13AQ9UPW8 1703 aa25.36■■□□□ 1.65
PPHLN1-220ENST00000552429 PABPN1Q86U42 306 aaKnown RBP eCLIP25.26■■□□□ 1.63
PPHLN1-220ENST00000552429 BICRAQ9NZM4 1560 aa25.12■■□□□ 1.61
PPHLN1-220ENST00000552429 SCRIBQ14160 1630 aa25.09■■□□□ 1.61
PPHLN1-220ENST00000552429 SHROOM4Q9ULL8 1493 aa24.95■■□□□ 1.58
PPHLN1-220ENST00000552429 DNAJC5BQ9UF47 199 aa24.84■■□□□ 1.57
PPHLN1-220ENST00000552429 EIF4G1Q04637 1599 aaKnown RBP24.51■■□□□ 1.51
PPHLN1-220ENST00000552429 CC2D2AQ9P2K1 1620 aa24.44■■□□□ 1.5
PPHLN1-220ENST00000552429 CECR2Q9BXF3 1484 aa24.31■■□□□ 1.48
PPHLN1-220ENST00000552429 BAZ1AQ9NRL2 1556 aaPredicted RBP24.02■■□□□ 1.44
PPHLN1-220ENST00000552429 SMARCA4P51532 1647 aa24.01■■□□□ 1.43
PPHLN1-220ENST00000552429 NCAPD3P42695 1498 aa23.94■■□□□ 1.42
PPHLN1-220ENST00000552429 SMARCA2P51531 1590 aa23.92■■□□□ 1.42
PPHLN1-220ENST00000552429 ATAD2BQ9ULI0 1458 aa23.91■■□□□ 1.42
PPHLN1-220ENST00000552429 MROH2BQ7Z745 1585 aa23.81■■□□□ 1.4
PPHLN1-220ENST00000552429 HMGXB3Q12766 1538 aa23.79■■□□□ 1.4
PPHLN1-220ENST00000552429 PEG3Q9GZU2 1588 aa23.78■■□□□ 1.4
PPHLN1-220ENST00000552429 BAZ1BQ9UIG0 1483 aaKnown RBP23.74■■□□□ 1.39
PPHLN1-220ENST00000552429 WIZO95785 1651 aa23.57■■□□□ 1.36
PPHLN1-220ENST00000552429 RSF1Q96T23 1441 aaPredicted RBP23.53■■□□□ 1.36
PPHLN1-220ENST00000552429 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
PPHLN1-220ENST00000552429 LAMC3Q9Y6N6 1575 aa23.33■■□□□ 1.33
PPHLN1-220ENST00000552429 NESP48681 1621 aa23.32■■□□□ 1.32
PPHLN1-220ENST00000552429 TOP2AP11388 1531 aaKnown RBP23.32■■□□□ 1.32
PPHLN1-220ENST00000552429 CADPSQ9ULU8 1353 aa23.26■■□□□ 1.31
PPHLN1-220ENST00000552429 PDS5BQ9NTI5 1447 aa23.22■■□□□ 1.31
PPHLN1-220ENST00000552429 CUX2O14529 1486 aa23.11■■□□□ 1.29
PPHLN1-220ENST00000552429 KIF21AQ7Z4S6 1674 aa23.07■■□□□ 1.28
PPHLN1-220ENST00000552429 CCDC88BA6NC98 1476 aa23.06■■□□□ 1.28
PPHLN1-220ENST00000552429 CFTRP13569 1480 aa23.06■■□□□ 1.28
PPHLN1-220ENST00000552429 SUPT5HO00267 1087 aaKnown RBP23.02■■□□□ 1.28
PPHLN1-220ENST00000552429 THOC2Q8NI27 1593 aaKnown RBP22.97■■□□□ 1.27
PPHLN1-220ENST00000552429 FANCD2Q9BXW9 1451 aa22.96■■□□□ 1.27
PPHLN1-220ENST00000552429 CEP164Q9UPV0 1460 aa22.95■■□□□ 1.26
PPHLN1-220ENST00000552429 MRC2Q9UBG0 1479 aa22.92■■□□□ 1.26
PPHLN1-220ENST00000552429 PRDM2Q13029 1718 aa22.91■■□□□ 1.26
PPHLN1-220ENST00000552429 WDR62O43379 1518 aa22.82■■□□□ 1.24
PPHLN1-220ENST00000552429 URB2Q14146 1524 aaKnown RBP22.69■■□□□ 1.22
PPHLN1-220ENST00000552429 ABCC8Q09428 1581 aa22.67■■□□□ 1.22
PPHLN1-220ENST00000552429 TOPBP1Q92547 1522 aa22.57■■□□□ 1.2
PPHLN1-220ENST00000552429 DNMBPQ6XZF7 1577 aa22.55■■□□□ 1.2
PPHLN1-220ENST00000552429 DNAJC5Q9H3Z4 198 aa22.53■■□□□ 1.2
PPHLN1-220ENST00000552429 IFT140Q96RY7 1462 aa22.48■■□□□ 1.19
PPHLN1-220ENST00000552429 POLA1P09884 1462 aaPredicted RBP22.36■■□□□ 1.17
PPHLN1-220ENST00000552429 SOGA1O94964 1423 aa22.34■■□□□ 1.17
PPHLN1-220ENST00000552429 CUX1P39880 1505 aa22.34■■□□□ 1.17
PPHLN1-220ENST00000552429 ZNF608Q9ULD9 1512 aaPredicted RBP22.31■■□□□ 1.16
PPHLN1-220ENST00000552429 TARBP1Q13395 1621 aaKnown RBP22.31■■□□□ 1.16
PPHLN1-220ENST00000552429 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
PPHLN1-220ENST00000552429 RAD54L2Q9Y4B4 1467 aa22.26■■□□□ 1.15
PPHLN1-220ENST00000552429 OSCARQ8IYS5 282 aa22.24■■□□□ 1.15
PPHLN1-220ENST00000552429 EIF4G3O43432 1585 aaKnown RBP22.23■■□□□ 1.15
PPHLN1-220ENST00000552429 WRNQ14191 1432 aaPredicted RBP eCLIP22.23■■□□□ 1.15
PPHLN1-220ENST00000552429 AQRO60306 1485 aaKnown RBP eCLIP22.22■■□□□ 1.15
PPHLN1-220ENST00000552429 WDR97A6NE52 1622 aa22.2■■□□□ 1.14
PPHLN1-220ENST00000552429 TDRD9Q8NDG6 1382 aaKnown RBP22.19■■□□□ 1.14
PPHLN1-220ENST00000552429 TOP2BQ02880 1626 aa22.17■■□□□ 1.14
PPHLN1-220ENST00000552429 BIVM-ERCC5R4GMW8 1640 aa22.16■■□□□ 1.14
PPHLN1-220ENST00000552429 SYNJ1O43426 1573 aa22.11■■□□□ 1.13
PPHLN1-220ENST00000552429 ABCA10Q8WWZ4 1543 aa22.1■■□□□ 1.13
PPHLN1-220ENST00000552429 FBLN2P98095 1184 aa22.08■■□□□ 1.13
PPHLN1-220ENST00000552429 GRIN2BQ13224 1484 aa22.07■■□□□ 1.12
PPHLN1-220ENST00000552429 GAPVD1Q14C86 1478 aa22.06■■□□□ 1.12
PPHLN1-220ENST00000552429 CHMP7Q8WUX9 453 aaPredicted RBP22.02■■□□□ 1.12
PPHLN1-220ENST00000552429 MAGI1Q96QZ7 1491 aaPredicted RBP22.02■■□□□ 1.12
PPHLN1-220ENST00000552429 SNAPC4Q5SXM2 1469 aa22■■□□□ 1.11
PPHLN1-220ENST00000552429 CHD1O14646 1710 aa22■■□□□ 1.11
PPHLN1-220ENST00000552429 PBRM1Q86U86 1689 aa21.98■■□□□ 1.11
PPHLN1-220ENST00000552429 ABCA5Q8WWZ7 1642 aa21.98■■□□□ 1.11
PPHLN1-220ENST00000552429 SYNJ2O15056 1496 aa21.92■■□□□ 1.1
PPHLN1-220ENST00000552429 ERICH3Q5RHP9 1530 aa21.85■■□□□ 1.09
PPHLN1-220ENST00000552429 FHAD1B1AJZ9 1412 aa21.8■■□□□ 1.08
PPHLN1-220ENST00000552429 KIF27Q86VH2 1401 aa21.8■■□□□ 1.08
PPHLN1-220ENST00000552429 ADAMTS12P58397 1594 aa21.77■■□□□ 1.08
PPHLN1-220ENST00000552429 TRIM41Q8WV44 630 aa21.76■■□□□ 1.07
PPHLN1-220ENST00000552429 RIMBP3CA6NJZ7 1639 aa21.76■■□□□ 1.07
PPHLN1-220ENST00000552429 RIMBP3BA6NNM3 1639 aa21.76■■□□□ 1.07
PPHLN1-220ENST00000552429 RIMBP3Q9UFD9 1639 aa21.76■■□□□ 1.07
PPHLN1-220ENST00000552429 GRIN2AQ12879 1464 aa21.75■■□□□ 1.07
PPHLN1-220ENST00000552429 ARHGEF11O15085 1522 aa21.75■■□□□ 1.07
PPHLN1-220ENST00000552429 CLASP1Q7Z460 1538 aa21.72■■□□□ 1.07
PPHLN1-220ENST00000552429 IGF1RP08069 1367 aa21.7■■□□□ 1.06
PPHLN1-220ENST00000552429 CYB5RLQ6IPT4 315 aa21.65■■□□□ 1.06
PPHLN1-220ENST00000552429 CUL7Q14999 1698 aa21.65■■□□□ 1.06
PPHLN1-220ENST00000552429 NUP160Q12769 1436 aa21.64■■□□□ 1.06
PPHLN1-220ENST00000552429 CEP170Q5SW79 1584 aa21.61■■□□□ 1.05
PPHLN1-220ENST00000552429 CARMIL1Q5VZK9 1371 aa21.6■■□□□ 1.05
PPHLN1-220ENST00000552429 ARAP1Q96P48 1450 aa21.53■■□□□ 1.04
PPHLN1-220ENST00000552429 JPH4Q96JJ6 628 aa21.53■■□□□ 1.04
PPHLN1-220ENST00000552429 RUSC2Q8N2Y8 1516 aa21.5■■□□□ 1.03
PPHLN1-220ENST00000552429 SHROOM2Q13796 1616 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms