RNA–Protein interactions for RNA: ENST00000552387.1

ITGA5-209, Transcript of integrin subunit alpha 5, humanhuman

TSL 2

Gene ITGA5, Length 1,333 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-209ENST00000552387 NISCHQ9Y2I1 1504 aa27.7■■■□□ 2.02
ITGA5-209ENST00000552387 CCDC180Q9P1Z9 1646 aa24.52■■□□□ 1.52
ITGA5-209ENST00000552387 ABCC9O60706 1549 aa23.75■■□□□ 1.39
ITGA5-209ENST00000552387 ZCCHC6Q5VYS8 1495 aaKnown RBP23.17■■□□□ 1.3
ITGA5-209ENST00000552387 NACADO15069 1562 aa22.95■■□□□ 1.26
ITGA5-209ENST00000552387 DCAF1Q9Y4B6 1507 aa22.91■■□□□ 1.26
ITGA5-209ENST00000552387 RB1CC1Q8TDY2 1594 aa22.91■■□□□ 1.26
ITGA5-209ENST00000552387 MYO15BQ96JP2 1530 aa22.9■■□□□ 1.26
ITGA5-209ENST00000552387 DCAF8L2P0C7V8 631 aa22.89■■□□□ 1.26
ITGA5-209ENST00000552387 UNC13AQ9UPW8 1703 aa22.52■■□□□ 1.2
ITGA5-209ENST00000552387 SCRIBQ14160 1630 aa22.43■■□□□ 1.18
ITGA5-209ENST00000552387 BICRAQ9NZM4 1560 aa22.33■■□□□ 1.16
ITGA5-209ENST00000552387 PABPN1Q86U42 306 aaKnown RBP eCLIP22.2■■□□□ 1.14
ITGA5-209ENST00000552387 SHROOM4Q9ULL8 1493 aa22.03■■□□□ 1.12
ITGA5-209ENST00000552387 AEBP2Q6ZN18 517 aaPredicted RBP21.76■■□□□ 1.07
ITGA5-209ENST00000552387 EIF4G1Q04637 1599 aaKnown RBP21.66■■□□□ 1.06
ITGA5-209ENST00000552387 CECR2Q9BXF3 1484 aa21.6■■□□□ 1.05
ITGA5-209ENST00000552387 DNAJC5BQ9UF47 199 aa21.59■■□□□ 1.05
ITGA5-209ENST00000552387 CC2D2AQ9P2K1 1620 aa21.51■■□□□ 1.03
ITGA5-209ENST00000552387 SMARCA4P51532 1647 aa21.46■■□□□ 1.03
ITGA5-209ENST00000552387 BAZ1AQ9NRL2 1556 aaPredicted RBP21.42■■□□□ 1.02
ITGA5-209ENST00000552387 MROH2BQ7Z745 1585 aa21.4■■□□□ 1.02
ITGA5-209ENST00000552387 ATAD2BQ9ULI0 1458 aa21.26■□□□□ 0.99
ITGA5-209ENST00000552387 PEG3Q9GZU2 1588 aa21.24■□□□□ 0.99
ITGA5-209ENST00000552387 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
ITGA5-209ENST00000552387 SMARCA2P51531 1590 aa21.2■□□□□ 0.98
ITGA5-209ENST00000552387 WIZO95785 1651 aa21.18■□□□□ 0.98
ITGA5-209ENST00000552387 NCAPD3P42695 1498 aa21.18■□□□□ 0.98
ITGA5-209ENST00000552387 HMGXB3Q12766 1538 aa21.13■□□□□ 0.97
ITGA5-209ENST00000552387 BAZ1BQ9UIG0 1483 aaKnown RBP21.07■□□□□ 0.96
ITGA5-209ENST00000552387 TOP2AP11388 1531 aaKnown RBP20.94■□□□□ 0.94
ITGA5-209ENST00000552387 SUPT5HO00267 1087 aaKnown RBP20.77■□□□□ 0.91
ITGA5-209ENST00000552387 CCDC88BA6NC98 1476 aa20.68■□□□□ 0.9
ITGA5-209ENST00000552387 NESP48681 1621 aa20.67■□□□□ 0.9
ITGA5-209ENST00000552387 LAMC3Q9Y6N6 1575 aa20.58■□□□□ 0.89
ITGA5-209ENST00000552387 CADPSQ9ULU8 1353 aa20.56■□□□□ 0.88
ITGA5-209ENST00000552387 CFTRP13569 1480 aa20.52■□□□□ 0.88
ITGA5-209ENST00000552387 KIF21AQ7Z4S6 1674 aa20.44■□□□□ 0.86
ITGA5-209ENST00000552387 CHIC1Q5VXU3 224 aa20.44■□□□□ 0.86
ITGA5-209ENST00000552387 PRDM2Q13029 1718 aa20.43■□□□□ 0.86
ITGA5-209ENST00000552387 ERCC6Q03468 1493 aa20.38■□□□□ 0.85
ITGA5-209ENST00000552387 PDS5BQ9NTI5 1447 aa20.37■□□□□ 0.85
ITGA5-209ENST00000552387 FANCD2Q9BXW9 1451 aa20.35■□□□□ 0.85
ITGA5-209ENST00000552387 THOC2Q8NI27 1593 aaKnown RBP20.32■□□□□ 0.84
ITGA5-209ENST00000552387 CEP164Q9UPV0 1460 aa20.28■□□□□ 0.84
ITGA5-209ENST00000552387 MRC2Q9UBG0 1479 aa20.22■□□□□ 0.83
ITGA5-209ENST00000552387 URB2Q14146 1524 aaKnown RBP20.19■□□□□ 0.82
ITGA5-209ENST00000552387 WDR62O43379 1518 aa20.18■□□□□ 0.82
ITGA5-209ENST00000552387 CUX2O14529 1486 aa20.1■□□□□ 0.81
ITGA5-209ENST00000552387 TOPBP1Q92547 1522 aa20.08■□□□□ 0.81
ITGA5-209ENST00000552387 DNMBPQ6XZF7 1577 aa20.07■□□□□ 0.8
ITGA5-209ENST00000552387 CUX1P39880 1505 aa20.06■□□□□ 0.8
ITGA5-209ENST00000552387 ABCC8Q09428 1581 aa20.05■□□□□ 0.8
ITGA5-209ENST00000552387 SYNJ1O43426 1573 aa19.98■□□□□ 0.79
ITGA5-209ENST00000552387 WRNQ14191 1432 aaPredicted RBP eCLIP19.95■□□□□ 0.78
ITGA5-209ENST00000552387 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
ITGA5-209ENST00000552387 POLA1P09884 1462 aaPredicted RBP19.93■□□□□ 0.78
ITGA5-209ENST00000552387 TOP2BQ02880 1626 aa19.92■□□□□ 0.78
ITGA5-209ENST00000552387 FGD5Q6ZNL6 1462 aa19.91■□□□□ 0.78
ITGA5-209ENST00000552387 TARBP1Q13395 1621 aaKnown RBP19.87■□□□□ 0.77
ITGA5-209ENST00000552387 RAD54L2Q9Y4B4 1467 aa19.85■□□□□ 0.77
ITGA5-209ENST00000552387 IFT140Q96RY7 1462 aa19.85■□□□□ 0.77
ITGA5-209ENST00000552387 WDR97A6NE52 1622 aa19.81■□□□□ 0.76
ITGA5-209ENST00000552387 ZNF608Q9ULD9 1512 aaPredicted RBP19.81■□□□□ 0.76
ITGA5-209ENST00000552387 SOGA1O94964 1423 aa19.79■□□□□ 0.76
ITGA5-209ENST00000552387 EIF4G3O43432 1585 aaKnown RBP19.74■□□□□ 0.75
ITGA5-209ENST00000552387 ABCA10Q8WWZ4 1543 aa19.72■□□□□ 0.75
ITGA5-209ENST00000552387 AQRO60306 1485 aaKnown RBP eCLIP19.68■□□□□ 0.741e-6■■■■□ 26.1
ITGA5-209ENST00000552387 TDRD9Q8NDG6 1382 aaKnown RBP19.67■□□□□ 0.74
ITGA5-209ENST00000552387 ABCA5Q8WWZ7 1642 aa19.67■□□□□ 0.74
ITGA5-209ENST00000552387 PBRM1Q86U86 1689 aa19.59■□□□□ 0.73
ITGA5-209ENST00000552387 GAPVD1Q14C86 1478 aa19.58■□□□□ 0.73
ITGA5-209ENST00000552387 TRIM41Q8WV44 630 aa19.55■□□□□ 0.72
ITGA5-209ENST00000552387 GRIN2BQ13224 1484 aa19.54■□□□□ 0.72
ITGA5-209ENST00000552387 SNAPC4Q5SXM2 1469 aa19.52■□□□□ 0.72
ITGA5-209ENST00000552387 RUSC2Q8N2Y8 1516 aa19.49■□□□□ 0.71
ITGA5-209ENST00000552387 KIF27Q86VH2 1401 aa19.48■□□□□ 0.71
ITGA5-209ENST00000552387 ERICH3Q5RHP9 1530 aa19.47■□□□□ 0.71
ITGA5-209ENST00000552387 ADAMTS12P58397 1594 aa19.47■□□□□ 0.71
ITGA5-209ENST00000552387 MAGI1Q96QZ7 1491 aaPredicted RBP19.46■□□□□ 0.71
ITGA5-209ENST00000552387 CHD1O14646 1710 aa19.46■□□□□ 0.71
ITGA5-209ENST00000552387 IGF1RP08069 1367 aa19.4■□□□□ 0.7
ITGA5-209ENST00000552387 SYNJ2O15056 1496 aa19.39■□□□□ 0.69
ITGA5-209ENST00000552387 FHAD1B1AJZ9 1412 aa19.35■□□□□ 0.69
ITGA5-209ENST00000552387 CUL7Q14999 1698 aa19.35■□□□□ 0.69
ITGA5-209ENST00000552387 GRIN2AQ12879 1464 aa19.31■□□□□ 0.68
ITGA5-209ENST00000552387 FBLN2P98095 1184 aa19.29■□□□□ 0.68
ITGA5-209ENST00000552387 CHMP7Q8WUX9 453 aaPredicted RBP19.27■□□□□ 0.68
ITGA5-209ENST00000552387 CARMIL1Q5VZK9 1371 aa19.26■□□□□ 0.67
ITGA5-209ENST00000552387 CEP170Q5SW79 1584 aa19.26■□□□□ 0.67
ITGA5-209ENST00000552387 EEA1Q15075 1411 aa19.25■□□□□ 0.67
ITGA5-209ENST00000552387 CLASP1Q7Z460 1538 aa19.24■□□□□ 0.67
ITGA5-209ENST00000552387 NUP160Q12769 1436 aa19.23■□□□□ 0.67
ITGA5-209ENST00000552387 PRXQ9BXM0 1461 aa19.23■□□□□ 0.67
ITGA5-209ENST00000552387 OSCARQ8IYS5 282 aa19.23■□□□□ 0.67
ITGA5-209ENST00000552387 FAM9AQ8IZU1 332 aaPredicted RBP19.21■□□□□ 0.67
ITGA5-209ENST00000552387 RAPGEF2Q9Y4G8 1499 aa19.19■□□□□ 0.66
ITGA5-209ENST00000552387 CSRNP3Q8WYN3 585 aa19.18■□□□□ 0.66
ITGA5-209ENST00000552387 DNAJC5Q9H3Z4 198 aa19.15■□□□□ 0.66
ITGA5-209ENST00000552387 KIF21BO75037 1637 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms