RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 NISCHQ9Y2I1 1504 aa24.47■■□□□ 1.51
PFDN5-216ENST00000552341 CCDC180Q9P1Z9 1646 aa21.26■□□□□ 0.99
PFDN5-216ENST00000552341 ZCCHC6Q5VYS8 1495 aaKnown RBP20.58■□□□□ 0.89
PFDN5-216ENST00000552341 DCAF1Q9Y4B6 1507 aa20.23■□□□□ 0.83
PFDN5-216ENST00000552341 DCAF8L2P0C7V8 631 aa20.09■□□□□ 0.81
PFDN5-216ENST00000552341 SHROOM4Q9ULL8 1493 aa20.01■□□□□ 0.79
PFDN5-216ENST00000552341 ABCC9O60706 1549 aa19.99■□□□□ 0.79
PFDN5-216ENST00000552341 MYO15BQ96JP2 1530 aa19.94■□□□□ 0.78
PFDN5-216ENST00000552341 NACADO15069 1562 aa19.76■□□□□ 0.75
PFDN5-216ENST00000552341 SCRIBQ14160 1630 aa19.57■□□□□ 0.72
PFDN5-216ENST00000552341 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
PFDN5-216ENST00000552341 SUPT5HO00267 1087 aaKnown RBP19.29■□□□□ 0.68
PFDN5-216ENST00000552341 UNC13AQ9UPW8 1703 aa19.25■□□□□ 0.67
PFDN5-216ENST00000552341 BICRAQ9NZM4 1560 aa19.05■□□□□ 0.64
PFDN5-216ENST00000552341 RSF1Q96T23 1441 aaPredicted RBP19.04■□□□□ 0.64
PFDN5-216ENST00000552341 CECR2Q9BXF3 1484 aa19.02■□□□□ 0.64
PFDN5-216ENST00000552341 MROH2BQ7Z745 1585 aa18.92■□□□□ 0.62
PFDN5-216ENST00000552341 PABPN1Q86U42 306 aaKnown RBP eCLIP18.88■□□□□ 0.61
PFDN5-216ENST00000552341 BAZ1AQ9NRL2 1556 aaPredicted RBP18.86■□□□□ 0.61
PFDN5-216ENST00000552341 SMARCA4P51532 1647 aa18.78■□□□□ 0.6
PFDN5-216ENST00000552341 WIZO95785 1651 aa18.78■□□□□ 0.6
PFDN5-216ENST00000552341 CHIC1Q5VXU3 224 aa18.58■□□□□ 0.56
PFDN5-216ENST00000552341 PEG3Q9GZU2 1588 aa18.57■□□□□ 0.56
PFDN5-216ENST00000552341 TOP2AP11388 1531 aaKnown RBP18.55■□□□□ 0.56
PFDN5-216ENST00000552341 ATAD2BQ9ULI0 1458 aa18.44■□□□□ 0.54
PFDN5-216ENST00000552341 EIF4G1Q04637 1599 aaKnown RBP18.42■□□□□ 0.54
PFDN5-216ENST00000552341 SMARCA2P51531 1590 aa18.41■□□□□ 0.54
PFDN5-216ENST00000552341 CCDC88BA6NC98 1476 aa18.38■□□□□ 0.53
PFDN5-216ENST00000552341 BAZ1BQ9UIG0 1483 aaKnown RBP18.31■□□□□ 0.52
PFDN5-216ENST00000552341 NCAPD3P42695 1498 aa18.27■□□□□ 0.52
PFDN5-216ENST00000552341 HMGXB3Q12766 1538 aa18.24■□□□□ 0.51
PFDN5-216ENST00000552341 TRIM41Q8WV44 630 aa18.12■□□□□ 0.49
PFDN5-216ENST00000552341 CC2D2AQ9P2K1 1620 aa18.11■□□□□ 0.49
PFDN5-216ENST00000552341 ABCC8Q09428 1581 aa18.04■□□□□ 0.48
PFDN5-216ENST00000552341 CFTRP13569 1480 aa17.9■□□□□ 0.46
PFDN5-216ENST00000552341 WRNQ14191 1432 aaPredicted RBP eCLIP17.88■□□□□ 0.453e-8■□□□□ 9.6
PFDN5-216ENST00000552341 LOC105371045A0A1W2PR82 267 aa17.88■□□□□ 0.45
PFDN5-216ENST00000552341 SYNJ1O43426 1573 aa17.84■□□□□ 0.45
PFDN5-216ENST00000552341 PRDM2Q13029 1718 aa17.81■□□□□ 0.44
PFDN5-216ENST00000552341 FAM9AQ8IZU1 332 aaPredicted RBP17.8■□□□□ 0.44
PFDN5-216ENST00000552341 CADPSQ9ULU8 1353 aa17.79■□□□□ 0.44
PFDN5-216ENST00000552341 TOP2BQ02880 1626 aa17.75■□□□□ 0.43
PFDN5-216ENST00000552341 SOGA1O94964 1423 aa17.73■□□□□ 0.43
PFDN5-216ENST00000552341 BIVM-ERCC5R4GMW8 1640 aa17.73■□□□□ 0.43
PFDN5-216ENST00000552341 DNAJC5BQ9UF47 199 aa17.7■□□□□ 0.42
PFDN5-216ENST00000552341 CUX1P39880 1505 aa17.68■□□□□ 0.42
PFDN5-216ENST00000552341 RUSC2Q8N2Y8 1516 aa17.68■□□□□ 0.42
PFDN5-216ENST00000552341 EEA1Q15075 1411 aa17.66■□□□□ 0.42
PFDN5-216ENST00000552341 NESP48681 1621 aa17.63■□□□□ 0.41
PFDN5-216ENST00000552341 LAMC3Q9Y6N6 1575 aa17.61■□□□□ 0.41
PFDN5-216ENST00000552341 FANCD2Q9BXW9 1451 aa17.59■□□□□ 0.41
PFDN5-216ENST00000552341 CSRNP3Q8WYN3 585 aa17.57■□□□□ 0.4
PFDN5-216ENST00000552341 EHMT2Q96KQ7 1210 aa17.53■□□□□ 0.4
PFDN5-216ENST00000552341 KIF21BO75037 1637 aa17.46■□□□□ 0.39
PFDN5-216ENST00000552341 DNMBPQ6XZF7 1577 aa17.46■□□□□ 0.38
PFDN5-216ENST00000552341 CEP164Q9UPV0 1460 aa17.45■□□□□ 0.38
PFDN5-216ENST00000552341 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
PFDN5-216ENST00000552341 PDS5BQ9NTI5 1447 aa17.44■□□□□ 0.38
PFDN5-216ENST00000552341 GOLGA3Q08378 1498 aa17.43■□□□□ 0.38
PFDN5-216ENST00000552341 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
PFDN5-216ENST00000552341 TNIKQ9UKE5 1360 aa17.41■□□□□ 0.38
PFDN5-216ENST00000552341 KIF21AQ7Z4S6 1674 aa17.41■□□□□ 0.38
PFDN5-216ENST00000552341 KIF27Q86VH2 1401 aa17.4■□□□□ 0.38
PFDN5-216ENST00000552341 URB2Q14146 1524 aaKnown RBP17.39■□□□□ 0.37
PFDN5-216ENST00000552341 POLA1P09884 1462 aaPredicted RBP17.36■□□□□ 0.37
PFDN5-216ENST00000552341 PRXQ9BXM0 1461 aa17.36■□□□□ 0.37
PFDN5-216ENST00000552341 RAPGEF2Q9Y4G8 1499 aa17.35■□□□□ 0.37
PFDN5-216ENST00000552341 CUX2O14529 1486 aa17.33■□□□□ 0.37
PFDN5-216ENST00000552341 CEP162Q5TB80 1403 aa17.33■□□□□ 0.36
PFDN5-216ENST00000552341 UBTFP17480 764 aaKnown RBP17.32■□□□□ 0.36
PFDN5-216ENST00000552341 ERICH3Q5RHP9 1530 aa17.31■□□□□ 0.36
PFDN5-216ENST00000552341 RAD54L2Q9Y4B4 1467 aa17.3■□□□□ 0.36
PFDN5-216ENST00000552341 ABCA10Q8WWZ4 1543 aa17.3■□□□□ 0.36
PFDN5-216ENST00000552341 IGF1RP08069 1367 aa17.28■□□□□ 0.36
PFDN5-216ENST00000552341 WDR97A6NE52 1622 aa17.26■□□□□ 0.35
PFDN5-216ENST00000552341 MRC2Q9UBG0 1479 aa17.22■□□□□ 0.35
PFDN5-216ENST00000552341 TARBP1Q13395 1621 aaKnown RBP17.19■□□□□ 0.34
PFDN5-216ENST00000552341 CARMIL1Q5VZK9 1371 aa17.16■□□□□ 0.34
PFDN5-216ENST00000552341 ABCA5Q8WWZ7 1642 aa17.16■□□□□ 0.34
PFDN5-216ENST00000552341 CLIP1P30622 1438 aa17.16■□□□□ 0.34
PFDN5-216ENST00000552341 WDR62O43379 1518 aa17.15■□□□□ 0.34
PFDN5-216ENST00000552341 PCGF6Q9BYE7 350 aa17.13■□□□□ 0.33
PFDN5-216ENST00000552341 TDRD9Q8NDG6 1382 aaKnown RBP17.11■□□□□ 0.33
PFDN5-216ENST00000552341 TRIM26Q12899 539 aaPredicted RBP17.1■□□□□ 0.33
PFDN5-216ENST00000552341 CUL7Q14999 1698 aa17.1■□□□□ 0.33
PFDN5-216ENST00000552341 GAPVD1Q14C86 1478 aa17.09■□□□□ 0.33
PFDN5-216ENST00000552341 THOC2Q8NI27 1593 aaKnown RBP17.09■□□□□ 0.33
PFDN5-216ENST00000552341 ERCC6Q03468 1493 aa17.08■□□□□ 0.33
PFDN5-216ENST00000552341 VPS8Q8N3P4 1428 aa17.03■□□□□ 0.32
PFDN5-216ENST00000552341 ARAP1Q96P48 1450 aa17.02■□□□□ 0.32
PFDN5-216ENST00000552341 IFT140Q96RY7 1462 aa17.02■□□□□ 0.32
PFDN5-216ENST00000552341 PBRM1Q86U86 1689 aa17■□□□□ 0.31
PFDN5-216ENST00000552341 RANGAP1P46060 587 aaPredicted RBP17■□□□□ 0.31
PFDN5-216ENST00000552341 PPARGC1BQ86YN6 1023 aaKnown RBP17■□□□□ 0.31
PFDN5-216ENST00000552341 AQRO60306 1485 aaKnown RBP eCLIP16.99■□□□□ 0.316e-7■■■■■ 32.7
PFDN5-216ENST00000552341 ARHGAP35Q9NRY4 1499 aa16.99■□□□□ 0.31
PFDN5-216ENST00000552341 ZNF608Q9ULD9 1512 aaPredicted RBP16.97■□□□□ 0.31
PFDN5-216ENST00000552341 CTTNBP2Q8WZ74 1663 aa16.94■□□□□ 0.3
PFDN5-216ENST00000552341 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
PFDN5-216ENST00000552341 ADAMTS12P58397 1594 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms