RNA–Protein interactions for RNA: ENST00000552138.5

PACS2-214, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 2

Gene PACS2, Length 765 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-214ENST00000552138 NISCHQ9Y2I1 1504 aa34.65■■■■□ 3.14
PACS2-214ENST00000552138 CCDC180Q9P1Z9 1646 aa30.91■■■□□ 2.54
PACS2-214ENST00000552138 ABCC9O60706 1549 aa30.27■■■□□ 2.44
PACS2-214ENST00000552138 DCAF8L2P0C7V8 631 aa29.12■■■□□ 2.25
PACS2-214ENST00000552138 RB1CC1Q8TDY2 1594 aa29.06■■■□□ 2.24
PACS2-214ENST00000552138 NACADO15069 1562 aa29.02■■■□□ 2.24
PACS2-214ENST00000552138 ZCCHC6Q5VYS8 1495 aaKnown RBP28.86■■■□□ 2.21
PACS2-214ENST00000552138 MYO15BQ96JP2 1530 aa28.83■■■□□ 2.21
PACS2-214ENST00000552138 DCAF1Q9Y4B6 1507 aa28.68■■■□□ 2.18
PACS2-214ENST00000552138 UNC13AQ9UPW8 1703 aa28.59■■■□□ 2.17
PACS2-214ENST00000552138 PABPN1Q86U42 306 aaKnown RBP eCLIP28.34■■■□□ 2.13
PACS2-214ENST00000552138 BICRAQ9NZM4 1560 aa28.28■■■□□ 2.12
PACS2-214ENST00000552138 SCRIBQ14160 1630 aa28.15■■■□□ 2.1
PACS2-214ENST00000552138 DNAJC5BQ9UF47 199 aa27.94■■■□□ 2.06
PACS2-214ENST00000552138 SHROOM4Q9ULL8 1493 aa27.89■■■□□ 2.05
PACS2-214ENST00000552138 EIF4G1Q04637 1599 aaKnown RBP27.49■■□□□ 1.99
PACS2-214ENST00000552138 CC2D2AQ9P2K1 1620 aa27.41■■□□□ 1.98
PACS2-214ENST00000552138 CECR2Q9BXF3 1484 aa27.19■■□□□ 1.94
PACS2-214ENST00000552138 SMARCA4P51532 1647 aa26.94■■□□□ 1.9
PACS2-214ENST00000552138 BAZ1AQ9NRL2 1556 aaPredicted RBP26.84■■□□□ 1.89
PACS2-214ENST00000552138 ATAD2BQ9ULI0 1458 aa26.77■■□□□ 1.88
PACS2-214ENST00000552138 NCAPD3P42695 1498 aa26.76■■□□□ 1.87
PACS2-214ENST00000552138 SMARCA2P51531 1590 aa26.73■■□□□ 1.87
PACS2-214ENST00000552138 MROH2BQ7Z745 1585 aa26.71■■□□□ 1.87
PACS2-214ENST00000552138 PEG3Q9GZU2 1588 aa26.69■■□□□ 1.86
PACS2-214ENST00000552138 HMGXB3Q12766 1538 aa26.66■■□□□ 1.86
PACS2-214ENST00000552138 BAZ1BQ9UIG0 1483 aaKnown RBP26.52■■□□□ 1.84
PACS2-214ENST00000552138 WIZO95785 1651 aa26.46■■□□□ 1.83
PACS2-214ENST00000552138 RSF1Q96T23 1441 aaPredicted RBP26.33■■□□□ 1.81
PACS2-214ENST00000552138 NESP48681 1621 aa26.17■■□□□ 1.78
PACS2-214ENST00000552138 TOP2AP11388 1531 aaKnown RBP26.13■■□□□ 1.77
PACS2-214ENST00000552138 ERCC6Q03468 1493 aa26.11■■□□□ 1.77
PACS2-214ENST00000552138 LAMC3Q9Y6N6 1575 aa26.1■■□□□ 1.77
PACS2-214ENST00000552138 CADPSQ9ULU8 1353 aa25.95■■□□□ 1.75
PACS2-214ENST00000552138 KIF21AQ7Z4S6 1674 aa25.95■■□□□ 1.74
PACS2-214ENST00000552138 PDS5BQ9NTI5 1447 aa25.88■■□□□ 1.73
PACS2-214ENST00000552138 THOC2Q8NI27 1593 aaKnown RBP25.86■■□□□ 1.73
PACS2-214ENST00000552138 CUX2O14529 1486 aa25.84■■□□□ 1.73
PACS2-214ENST00000552138 CFTRP13569 1480 aa25.81■■□□□ 1.72
PACS2-214ENST00000552138 CCDC88BA6NC98 1476 aa25.8■■□□□ 1.72
PACS2-214ENST00000552138 PRDM2Q13029 1718 aa25.76■■□□□ 1.71
PACS2-214ENST00000552138 SUPT5HO00267 1087 aaKnown RBP25.66■■□□□ 1.7
PACS2-214ENST00000552138 FANCD2Q9BXW9 1451 aa25.66■■□□□ 1.7
PACS2-214ENST00000552138 CEP164Q9UPV0 1460 aa25.64■■□□□ 1.69
PACS2-214ENST00000552138 MRC2Q9UBG0 1479 aa25.63■■□□□ 1.69
PACS2-214ENST00000552138 WDR62O43379 1518 aa25.6■■□□□ 1.69
PACS2-214ENST00000552138 URB2Q14146 1524 aaKnown RBP25.45■■□□□ 1.66
PACS2-214ENST00000552138 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
PACS2-214ENST00000552138 DNAJC5Q9H3Z4 198 aa25.27■■□□□ 1.64
PACS2-214ENST00000552138 DNMBPQ6XZF7 1577 aa25.25■■□□□ 1.63
PACS2-214ENST00000552138 ABCC8Q09428 1581 aa25.21■■□□□ 1.63
PACS2-214ENST00000552138 IFT140Q96RY7 1462 aa25.1■■□□□ 1.61
PACS2-214ENST00000552138 CUX1P39880 1505 aa25.07■■□□□ 1.6
PACS2-214ENST00000552138 TARBP1Q13395 1621 aaKnown RBP25.06■■□□□ 1.6
PACS2-214ENST00000552138 POLA1P09884 1462 aaPredicted RBP25.05■■□□□ 1.6
PACS2-214ENST00000552138 ZNF608Q9ULD9 1512 aaPredicted RBP25.03■■□□□ 1.6
PACS2-214ENST00000552138 EIF4G3O43432 1585 aaKnown RBP24.97■■□□□ 1.59
PACS2-214ENST00000552138 FGD5Q6ZNL6 1462 aa24.96■■□□□ 1.59
PACS2-214ENST00000552138 SOGA1O94964 1423 aa24.94■■□□□ 1.58
PACS2-214ENST00000552138 RAD54L2Q9Y4B4 1467 aa24.93■■□□□ 1.58
PACS2-214ENST00000552138 WDR97A6NE52 1622 aa24.89■■□□□ 1.57
PACS2-214ENST00000552138 AQRO60306 1485 aaKnown RBP eCLIP24.88■■□□□ 1.57
PACS2-214ENST00000552138 BIVM-ERCC5R4GMW8 1640 aa24.87■■□□□ 1.57
PACS2-214ENST00000552138 OSCARQ8IYS5 282 aa24.84■■□□□ 1.57
PACS2-214ENST00000552138 SYNJ1O43426 1573 aa24.84■■□□□ 1.57
PACS2-214ENST00000552138 TOP2BQ02880 1626 aa24.83■■□□□ 1.57
PACS2-214ENST00000552138 TDRD9Q8NDG6 1382 aaKnown RBP24.83■■□□□ 1.57
PACS2-214ENST00000552138 WRNQ14191 1432 aaPredicted RBP eCLIP24.8■■□□□ 1.56
PACS2-214ENST00000552138 ABCA10Q8WWZ4 1543 aa24.73■■□□□ 1.55
PACS2-214ENST00000552138 CHD1O14646 1710 aa24.72■■□□□ 1.55
PACS2-214ENST00000552138 FBLN2P98095 1184 aa24.71■■□□□ 1.55
PACS2-214ENST00000552138 PBRM1Q86U86 1689 aa24.7■■□□□ 1.54
PACS2-214ENST00000552138 ABCA5Q8WWZ7 1642 aa24.7■■□□□ 1.54
PACS2-214ENST00000552138 GRIN2BQ13224 1484 aa24.63■■□□□ 1.53
PACS2-214ENST00000552138 GAPVD1Q14C86 1478 aa24.63■■□□□ 1.53
PACS2-214ENST00000552138 SNAPC4Q5SXM2 1469 aa24.63■■□□□ 1.53
PACS2-214ENST00000552138 MAGI1Q96QZ7 1491 aaPredicted RBP24.58■■□□□ 1.53
PACS2-214ENST00000552138 CHMP7Q8WUX9 453 aaPredicted RBP24.58■■□□□ 1.53
PACS2-214ENST00000552138 SYNJ2O15056 1496 aa24.49■■□□□ 1.51
PACS2-214ENST00000552138 TRIM41Q8WV44 630 aa24.46■■□□□ 1.51
PACS2-214ENST00000552138 ADAMTS12P58397 1594 aa24.45■■□□□ 1.5
PACS2-214ENST00000552138 ERICH3Q5RHP9 1530 aa24.43■■□□□ 1.5
PACS2-214ENST00000552138 RIMBP3CA6NJZ7 1639 aa24.43■■□□□ 1.5
PACS2-214ENST00000552138 RIMBP3BA6NNM3 1639 aa24.43■■□□□ 1.5
PACS2-214ENST00000552138 RIMBP3Q9UFD9 1639 aa24.43■■□□□ 1.5
PACS2-214ENST00000552138 CLASP1Q7Z460 1538 aa24.4■■□□□ 1.5
PACS2-214ENST00000552138 ARHGEF11O15085 1522 aa24.36■■□□□ 1.49
PACS2-214ENST00000552138 GRIN2AQ12879 1464 aa24.33■■□□□ 1.49
PACS2-214ENST00000552138 FHAD1B1AJZ9 1412 aa24.32■■□□□ 1.48
PACS2-214ENST00000552138 KIF27Q86VH2 1401 aa24.28■■□□□ 1.48
PACS2-214ENST00000552138 CEP170Q5SW79 1584 aa24.27■■□□□ 1.48
PACS2-214ENST00000552138 CYB5RLQ6IPT4 315 aa24.25■■□□□ 1.47
PACS2-214ENST00000552138 NUP160Q12769 1436 aa24.25■■□□□ 1.47
PACS2-214ENST00000552138 IGF1RP08069 1367 aa24.22■■□□□ 1.47
PACS2-214ENST00000552138 CUL7Q14999 1698 aa24.21■■□□□ 1.47
PACS2-214ENST00000552138 ARAP1Q96P48 1450 aa24.18■■□□□ 1.46
PACS2-214ENST00000552138 SHROOM2Q13796 1616 aa24.14■■□□□ 1.46
PACS2-214ENST00000552138 RUSC2Q8N2Y8 1516 aa24.1■■□□□ 1.45
PACS2-214ENST00000552138 CARMIL1Q5VZK9 1371 aa24.08■■□□□ 1.45
PACS2-214ENST00000552138 ERCC6L2Q5T890 1561 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms