RNA–Protein interactions for RNA: ENST00000551506.1

SLC38A1-209, Transcript of solute carrier family 38 member 1, humanhuman

TSL 3

Gene SLC38A1, Length 586 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-209ENST00000551506 NISCHQ9Y2I1 1504 aa44.68■■■■■ 4.74
SLC38A1-209ENST00000551506 CCDC180Q9P1Z9 1646 aa39.86■■■■□ 3.97
SLC38A1-209ENST00000551506 ABCC9O60706 1549 aa39.41■■■■□ 3.9
SLC38A1-209ENST00000551506 RB1CC1Q8TDY2 1594 aa37.68■■■■□ 3.62
SLC38A1-209ENST00000551506 NACADO15069 1562 aa37.56■■■■□ 3.6
SLC38A1-209ENST00000551506 DCAF8L2P0C7V8 631 aa37.38■■■■□ 3.57
SLC38A1-209ENST00000551506 MYO15BQ96JP2 1530 aa37.23■■■■□ 3.55
SLC38A1-209ENST00000551506 ZCCHC6Q5VYS8 1495 aaKnown RBP37.14■■■■□ 3.54
SLC38A1-209ENST00000551506 DCAF1Q9Y4B6 1507 aa36.93■■■■□ 3.5
SLC38A1-209ENST00000551506 UNC13AQ9UPW8 1703 aa36.92■■■■□ 3.5
SLC38A1-209ENST00000551506 PABPN1Q86U42 306 aaKnown RBP eCLIP36.76■■■■□ 3.48
SLC38A1-209ENST00000551506 BICRAQ9NZM4 1560 aa36.68■■■■□ 3.46
SLC38A1-209ENST00000551506 DNAJC5BQ9UF47 199 aa36.64■■■■□ 3.46
SLC38A1-209ENST00000551506 SCRIBQ14160 1630 aa36.35■■■■□ 3.41
SLC38A1-209ENST00000551506 SHROOM4Q9ULL8 1493 aa36.13■■■■□ 3.37
SLC38A1-209ENST00000551506 EIF4G1Q04637 1599 aaKnown RBP35.68■■■■□ 3.3
SLC38A1-209ENST00000551506 CC2D2AQ9P2K1 1620 aa35.64■■■■□ 3.3
SLC38A1-209ENST00000551506 CECR2Q9BXF3 1484 aa35.43■■■■□ 3.26
SLC38A1-209ENST00000551506 SMARCA4P51532 1647 aa34.75■■■■□ 3.15
SLC38A1-209ENST00000551506 NCAPD3P42695 1498 aa34.71■■■■□ 3.15
SLC38A1-209ENST00000551506 ATAD2BQ9ULI0 1458 aa34.67■■■■□ 3.14
SLC38A1-209ENST00000551506 BAZ1AQ9NRL2 1556 aaPredicted RBP34.61■■■■□ 3.13
SLC38A1-209ENST00000551506 SMARCA2P51531 1590 aa34.55■■■■□ 3.12
SLC38A1-209ENST00000551506 HMGXB3Q12766 1538 aa34.47■■■■□ 3.11
SLC38A1-209ENST00000551506 MROH2BQ7Z745 1585 aa34.45■■■■□ 3.11
SLC38A1-209ENST00000551506 PEG3Q9GZU2 1588 aa34.43■■■■□ 3.1
SLC38A1-209ENST00000551506 BAZ1BQ9UIG0 1483 aaKnown RBP34.31■■■■□ 3.08
SLC38A1-209ENST00000551506 WIZO95785 1651 aa34.05■■■■□ 3.04
SLC38A1-209ENST00000551506 NESP48681 1621 aa34.03■■■■□ 3.04
SLC38A1-209ENST00000551506 ERCC6Q03468 1493 aa33.91■■■■□ 3.02
SLC38A1-209ENST00000551506 RSF1Q96T23 1441 aaPredicted RBP33.9■■■■□ 3.02
SLC38A1-209ENST00000551506 LAMC3Q9Y6N6 1575 aa33.81■■■■□ 3
SLC38A1-209ENST00000551506 CUX2O14529 1486 aa33.74■■■□□ 2.99
SLC38A1-209ENST00000551506 CADPSQ9ULU8 1353 aa33.64■■■□□ 2.98
SLC38A1-209ENST00000551506 TOP2AP11388 1531 aaKnown RBP33.63■■■□□ 2.97
SLC38A1-209ENST00000551506 THOC2Q8NI27 1593 aaKnown RBP33.59■■■□□ 2.97
SLC38A1-209ENST00000551506 KIF21AQ7Z4S6 1674 aa33.58■■■□□ 2.97
SLC38A1-209ENST00000551506 PDS5BQ9NTI5 1447 aa33.56■■■□□ 2.96
SLC38A1-209ENST00000551506 CFTRP13569 1480 aa33.38■■■□□ 2.93
SLC38A1-209ENST00000551506 MRC2Q9UBG0 1479 aa33.28■■■□□ 2.92
SLC38A1-209ENST00000551506 CCDC88BA6NC98 1476 aa33.26■■■□□ 2.92
SLC38A1-209ENST00000551506 FANCD2Q9BXW9 1451 aa33.26■■■□□ 2.92
SLC38A1-209ENST00000551506 CEP164Q9UPV0 1460 aa33.23■■■□□ 2.91
SLC38A1-209ENST00000551506 WDR62O43379 1518 aa33.22■■■□□ 2.91
SLC38A1-209ENST00000551506 DNAJC5Q9H3Z4 198 aa33.21■■■□□ 2.91
SLC38A1-209ENST00000551506 PRDM2Q13029 1718 aa33.07■■■□□ 2.88
SLC38A1-209ENST00000551506 URB2Q14146 1524 aaKnown RBP33.01■■■□□ 2.87
SLC38A1-209ENST00000551506 TOPBP1Q92547 1522 aa32.71■■■□□ 2.83
SLC38A1-209ENST00000551506 SUPT5HO00267 1087 aaKnown RBP32.67■■■□□ 2.82
SLC38A1-209ENST00000551506 DNMBPQ6XZF7 1577 aa32.61■■■□□ 2.81
SLC38A1-209ENST00000551506 ABCC8Q09428 1581 aa32.6■■■□□ 2.81
SLC38A1-209ENST00000551506 IFT140Q96RY7 1462 aa32.55■■■□□ 2.8
SLC38A1-209ENST00000551506 ZNF608Q9ULD9 1512 aaPredicted RBP32.51■■■□□ 2.8
SLC38A1-209ENST00000551506 TARBP1Q13395 1621 aaKnown RBP32.41■■■□□ 2.78
SLC38A1-209ENST00000551506 POLA1P09884 1462 aaPredicted RBP32.41■■■□□ 2.78
SLC38A1-209ENST00000551506 CUX1P39880 1505 aa32.34■■■□□ 2.77
SLC38A1-209ENST00000551506 EIF4G3O43432 1585 aaKnown RBP32.33■■■□□ 2.77
SLC38A1-209ENST00000551506 RAD54L2Q9Y4B4 1467 aa32.29■■■□□ 2.76
SLC38A1-209ENST00000551506 AQRO60306 1485 aaKnown RBP eCLIP32.26■■■□□ 2.752e-6■■■□□ 15.2
SLC38A1-209ENST00000551506 FGD5Q6ZNL6 1462 aa32.26■■■□□ 2.75
SLC38A1-209ENST00000551506 OSCARQ8IYS5 282 aa32.24■■■□□ 2.75
SLC38A1-209ENST00000551506 SOGA1O94964 1423 aa32.23■■■□□ 2.75
SLC38A1-209ENST00000551506 TDRD9Q8NDG6 1382 aaKnown RBP32.12■■■□□ 2.73
SLC38A1-209ENST00000551506 WDR97A6NE52 1622 aa32.04■■■□□ 2.72
SLC38A1-209ENST00000551506 CHD1O14646 1710 aa32■■■□□ 2.71
SLC38A1-209ENST00000551506 ABCA10Q8WWZ4 1543 aa31.93■■■□□ 2.7
SLC38A1-209ENST00000551506 SYNJ1O43426 1573 aa31.93■■■□□ 2.7
SLC38A1-209ENST00000551506 BIVM-ERCC5R4GMW8 1640 aa31.93■■■□□ 2.7
SLC38A1-209ENST00000551506 WRNQ14191 1432 aaPredicted RBP eCLIP31.92■■■□□ 2.7
SLC38A1-209ENST00000551506 SNAPC4Q5SXM2 1469 aa31.92■■■□□ 2.7
SLC38A1-209ENST00000551506 TOP2BQ02880 1626 aa31.92■■■□□ 2.7
SLC38A1-209ENST00000551506 TRIM41Q8WV44 630 aa31.89■■■□□ 2.7
SLC38A1-209ENST00000551506 GRIN2BQ13224 1484 aa31.89■■■□□ 2.7
SLC38A1-209ENST00000551506 ABCA5Q8WWZ7 1642 aa31.86■■■□□ 2.69
SLC38A1-209ENST00000551506 GAPVD1Q14C86 1478 aa31.85■■■□□ 2.69
SLC38A1-209ENST00000551506 FBLN2P98095 1184 aa31.85■■■□□ 2.69
SLC38A1-209ENST00000551506 MAGI1Q96QZ7 1491 aaPredicted RBP31.84■■■□□ 2.69
SLC38A1-209ENST00000551506 RIMBP3CA6NJZ7 1639 aa31.84■■■□□ 2.69
SLC38A1-209ENST00000551506 RIMBP3BA6NNM3 1639 aa31.84■■■□□ 2.69
SLC38A1-209ENST00000551506 RIMBP3Q9UFD9 1639 aa31.84■■■□□ 2.69
SLC38A1-209ENST00000551506 PBRM1Q86U86 1689 aa31.82■■■□□ 2.68
SLC38A1-209ENST00000551506 ARHGEF11O15085 1522 aa31.79■■■□□ 2.68
SLC38A1-209ENST00000551506 SYNJ2O15056 1496 aa31.74■■■□□ 2.67
SLC38A1-209ENST00000551506 CHMP7Q8WUX9 453 aaPredicted RBP31.7■■■□□ 2.67
SLC38A1-209ENST00000551506 CLASP1Q7Z460 1538 aa31.68■■■□□ 2.66
SLC38A1-209ENST00000551506 ADAMTS12P58397 1594 aa31.56■■■□□ 2.64
SLC38A1-209ENST00000551506 ARAP1Q96P48 1450 aa31.53■■■□□ 2.64
SLC38A1-209ENST00000551506 ERICH3Q5RHP9 1530 aa31.51■■■□□ 2.63
SLC38A1-209ENST00000551506 GRIN2AQ12879 1464 aa31.5■■■□□ 2.63
SLC38A1-209ENST00000551506 CYB5RLQ6IPT4 315 aa31.48■■■□□ 2.63
SLC38A1-209ENST00000551506 FHAD1B1AJZ9 1412 aa31.46■■■□□ 2.63
SLC38A1-209ENST00000551506 NUP160Q12769 1436 aa31.41■■■□□ 2.62
SLC38A1-209ENST00000551506 CEP170Q5SW79 1584 aa31.4■■■□□ 2.62
SLC38A1-209ENST00000551506 KIF27Q86VH2 1401 aa31.26■■■□□ 2.6
SLC38A1-209ENST00000551506 IGF1RP08069 1367 aa31.26■■■□□ 2.59
SLC38A1-209ENST00000551506 ERCC6L2Q5T890 1561 aa31.25■■■□□ 2.59
SLC38A1-209ENST00000551506 SHROOM2Q13796 1616 aa31.22■■■□□ 2.59
SLC38A1-209ENST00000551506 CUL7Q14999 1698 aa31.13■■■□□ 2.57
SLC38A1-209ENST00000551506 RUSC2Q8N2Y8 1516 aa31.11■■■□□ 2.57
SLC38A1-209ENST00000551506 JPH4Q96JJ6 628 aa31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms