RNA–Protein interactions for RNA: ENST00000551236.5

MTA1-219, Transcript of metastasis associated 1, humanhuman

TSL 3

Gene MTA1, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-219ENST00000551236 NISCHQ9Y2I1 1504 aa29.41■■■□□ 2.3
MTA1-219ENST00000551236 CCDC180Q9P1Z9 1646 aa26.19■■□□□ 1.78
MTA1-219ENST00000551236 ABCC9O60706 1549 aa25.82■■□□□ 1.72
MTA1-219ENST00000551236 RB1CC1Q8TDY2 1594 aa24.76■■□□□ 1.55
MTA1-219ENST00000551236 DCAF8L2P0C7V8 631 aa24.71■■□□□ 1.55
MTA1-219ENST00000551236 NACADO15069 1562 aa24.68■■□□□ 1.54
MTA1-219ENST00000551236 ZCCHC6Q5VYS8 1495 aaKnown RBP24.49■■□□□ 1.51
MTA1-219ENST00000551236 MYO15BQ96JP2 1530 aa24.48■■□□□ 1.51
MTA1-219ENST00000551236 DCAF1Q9Y4B6 1507 aa24.32■■□□□ 1.48
MTA1-219ENST00000551236 PABPN1Q86U42 306 aaKnown RBP eCLIP24.1■■□□□ 1.45
MTA1-219ENST00000551236 UNC13AQ9UPW8 1703 aa24.08■■□□□ 1.45
MTA1-219ENST00000551236 BICRAQ9NZM4 1560 aa23.96■■□□□ 1.43
MTA1-219ENST00000551236 SCRIBQ14160 1630 aa23.92■■□□□ 1.42
MTA1-219ENST00000551236 DNAJC5BQ9UF47 199 aa23.77■■□□□ 1.4
MTA1-219ENST00000551236 SHROOM4Q9ULL8 1493 aa23.76■■□□□ 1.39
MTA1-219ENST00000551236 EIF4G1Q04637 1599 aaKnown RBP23.38■■□□□ 1.33
MTA1-219ENST00000551236 CC2D2AQ9P2K1 1620 aa23.31■■□□□ 1.32
MTA1-219ENST00000551236 CECR2Q9BXF3 1484 aa23.22■■□□□ 1.31
MTA1-219ENST00000551236 SMARCA4P51532 1647 aa22.85■■□□□ 1.25
MTA1-219ENST00000551236 BAZ1AQ9NRL2 1556 aaPredicted RBP22.83■■□□□ 1.25
MTA1-219ENST00000551236 NCAPD3P42695 1498 aa22.78■■□□□ 1.24
MTA1-219ENST00000551236 ATAD2BQ9ULI0 1458 aa22.78■■□□□ 1.24
MTA1-219ENST00000551236 SMARCA2P51531 1590 aa22.76■■□□□ 1.23
MTA1-219ENST00000551236 HMGXB3Q12766 1538 aa22.67■■□□□ 1.22
MTA1-219ENST00000551236 MROH2BQ7Z745 1585 aa22.66■■□□□ 1.22
MTA1-219ENST00000551236 BAZ1BQ9UIG0 1483 aaKnown RBP22.61■■□□□ 1.21
MTA1-219ENST00000551236 PEG3Q9GZU2 1588 aa22.61■■□□□ 1.21
MTA1-219ENST00000551236 WIZO95785 1651 aa22.39■■□□□ 1.17
MTA1-219ENST00000551236 RSF1Q96T23 1441 aaPredicted RBP22.36■■□□□ 1.17
MTA1-219ENST00000551236 ERCC6Q03468 1493 aa22.31■■□□□ 1.16
MTA1-219ENST00000551236 NESP48681 1621 aa22.27■■□□□ 1.16
MTA1-219ENST00000551236 LAMC3Q9Y6N6 1575 aa22.2■■□□□ 1.14
MTA1-219ENST00000551236 TOP2AP11388 1531 aaKnown RBP22.19■■□□□ 1.14
MTA1-219ENST00000551236 CADPSQ9ULU8 1353 aa22.12■■□□□ 1.13
MTA1-219ENST00000551236 PDS5BQ9NTI5 1447 aa22.1■■□□□ 1.13
MTA1-219ENST00000551236 CUX2O14529 1486 aa22.09■■□□□ 1.13
MTA1-219ENST00000551236 KIF21AQ7Z4S6 1674 aa21.97■■□□□ 1.11
MTA1-219ENST00000551236 THOC2Q8NI27 1593 aaKnown RBP21.96■■□□□ 1.11
MTA1-219ENST00000551236 CFTRP13569 1480 aa21.96■■□□□ 1.11
MTA1-219ENST00000551236 CCDC88BA6NC98 1476 aa21.91■■□□□ 1.1
MTA1-219ENST00000551236 CEP164Q9UPV0 1460 aa21.89■■□□□ 1.09
MTA1-219ENST00000551236 FANCD2Q9BXW9 1451 aa21.88■■□□□ 1.09
MTA1-219ENST00000551236 MRC2Q9UBG0 1479 aa21.87■■□□□ 1.09
MTA1-219ENST00000551236 WDR62O43379 1518 aa21.78■■□□□ 1.08
MTA1-219ENST00000551236 SUPT5HO00267 1087 aaKnown RBP21.75■■□□□ 1.07
MTA1-219ENST00000551236 PRDM2Q13029 1718 aa21.7■■□□□ 1.06
MTA1-219ENST00000551236 URB2Q14146 1524 aaKnown RBP21.65■■□□□ 1.06
MTA1-219ENST00000551236 DNAJC5Q9H3Z4 198 aa21.55■■□□□ 1.04
MTA1-219ENST00000551236 ABCC8Q09428 1581 aa21.51■■□□□ 1.03
MTA1-219ENST00000551236 TOPBP1Q92547 1522 aa21.5■■□□□ 1.03
MTA1-219ENST00000551236 DNMBPQ6XZF7 1577 aa21.46■■□□□ 1.03
MTA1-219ENST00000551236 IFT140Q96RY7 1462 aa21.43■■□□□ 1.02
MTA1-219ENST00000551236 POLA1P09884 1462 aaPredicted RBP21.32■■□□□ 1
MTA1-219ENST00000551236 ZNF608Q9ULD9 1512 aaPredicted RBP21.31■■□□□ 1
MTA1-219ENST00000551236 CUX1P39880 1505 aa21.28■■□□□ 1
MTA1-219ENST00000551236 FGD5Q6ZNL6 1462 aa21.25■□□□□ 0.99
MTA1-219ENST00000551236 SOGA1O94964 1423 aa21.23■□□□□ 0.99
MTA1-219ENST00000551236 TARBP1Q13395 1621 aaKnown RBP21.23■□□□□ 0.99
MTA1-219ENST00000551236 EIF4G3O43432 1585 aaKnown RBP21.23■□□□□ 0.99
MTA1-219ENST00000551236 RAD54L2Q9Y4B4 1467 aa21.22■□□□□ 0.99
MTA1-219ENST00000551236 AQRO60306 1485 aaKnown RBP eCLIP21.18■□□□□ 0.984e-8■■■■□ 22.9
MTA1-219ENST00000551236 OSCARQ8IYS5 282 aa21.15■□□□□ 0.98
MTA1-219ENST00000551236 TDRD9Q8NDG6 1382 aaKnown RBP21.13■□□□□ 0.97
MTA1-219ENST00000551236 WRNQ14191 1432 aaPredicted RBP eCLIP21.12■□□□□ 0.979e-6■■■■■ 50.1
MTA1-219ENST00000551236 WDR97A6NE52 1622 aa21.1■□□□□ 0.97
MTA1-219ENST00000551236 TOP2BQ02880 1626 aa21.04■□□□□ 0.96
MTA1-219ENST00000551236 SYNJ1O43426 1573 aa21.03■□□□□ 0.96
MTA1-219ENST00000551236 BIVM-ERCC5R4GMW8 1640 aa21.03■□□□□ 0.96
MTA1-219ENST00000551236 ABCA10Q8WWZ4 1543 aa21.03■□□□□ 0.96
MTA1-219ENST00000551236 GRIN2BQ13224 1484 aa21.01■□□□□ 0.95
MTA1-219ENST00000551236 FBLN2P98095 1184 aa21.01■□□□□ 0.95
MTA1-219ENST00000551236 SNAPC4Q5SXM2 1469 aa21.01■□□□□ 0.95
MTA1-219ENST00000551236 GAPVD1Q14C86 1478 aa20.99■□□□□ 0.95
MTA1-219ENST00000551236 MAGI1Q96QZ7 1491 aaPredicted RBP20.97■□□□□ 0.95
MTA1-219ENST00000551236 CHD1O14646 1710 aa20.94■□□□□ 0.94
MTA1-219ENST00000551236 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
MTA1-219ENST00000551236 CHMP7Q8WUX9 453 aaPredicted RBP20.92■□□□□ 0.94
MTA1-219ENST00000551236 PBRM1Q86U86 1689 aa20.89■□□□□ 0.94
MTA1-219ENST00000551236 SYNJ2O15056 1496 aa20.88■□□□□ 0.93
MTA1-219ENST00000551236 TRIM41Q8WV44 630 aa20.85■□□□□ 0.93
MTA1-219ENST00000551236 ARHGEF11O15085 1522 aa20.79■□□□□ 0.92
MTA1-219ENST00000551236 RIMBP3CA6NJZ7 1639 aa20.78■□□□□ 0.92
MTA1-219ENST00000551236 RIMBP3BA6NNM3 1639 aa20.78■□□□□ 0.92
MTA1-219ENST00000551236 RIMBP3Q9UFD9 1639 aa20.78■□□□□ 0.92
MTA1-219ENST00000551236 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
MTA1-219ENST00000551236 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
MTA1-219ENST00000551236 FHAD1B1AJZ9 1412 aa20.75■□□□□ 0.91
MTA1-219ENST00000551236 CLASP1Q7Z460 1538 aa20.74■□□□□ 0.91
MTA1-219ENST00000551236 GRIN2AQ12879 1464 aa20.73■□□□□ 0.91
MTA1-219ENST00000551236 KIF27Q86VH2 1401 aa20.7■□□□□ 0.9
MTA1-219ENST00000551236 NUP160Q12769 1436 aa20.64■□□□□ 0.89
MTA1-219ENST00000551236 CYB5RLQ6IPT4 315 aa20.63■□□□□ 0.89
MTA1-219ENST00000551236 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
MTA1-219ENST00000551236 CEP170Q5SW79 1584 aa20.61■□□□□ 0.89
MTA1-219ENST00000551236 IGF1RP08069 1367 aa20.59■□□□□ 0.89
MTA1-219ENST00000551236 CUL7Q14999 1698 aa20.55■□□□□ 0.88
MTA1-219ENST00000551236 CARMIL1Q5VZK9 1371 aa20.5■□□□□ 0.87
MTA1-219ENST00000551236 RUSC2Q8N2Y8 1516 aa20.46■□□□□ 0.87
MTA1-219ENST00000551236 SHROOM2Q13796 1616 aa20.45■□□□□ 0.87
MTA1-219ENST00000551236 ERCC6L2Q5T890 1561 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms