RNA–Protein interactions for RNA: ENST00000551092.5

ARL1-208, Transcript of ADP ribosylation factor like GTPase 1, humanhuman

TSL 5

Gene ARL1, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARL1-208ENST00000551092 NISCHQ9Y2I1 1504 aa36.09■■■■□ 3.37
ARL1-208ENST00000551092 ABCC9O60706 1549 aa32.49■■■□□ 2.79
ARL1-208ENST00000551092 CCDC180Q9P1Z9 1646 aa32.32■■■□□ 2.76
ARL1-208ENST00000551092 RB1CC1Q8TDY2 1594 aa30.83■■■□□ 2.53
ARL1-208ENST00000551092 DCAF8L2P0C7V8 631 aa30.66■■■□□ 2.5
ARL1-208ENST00000551092 NACADO15069 1562 aa30.61■■■□□ 2.49
ARL1-208ENST00000551092 DNAJC5BQ9UF47 199 aa30.58■■■□□ 2.49
ARL1-208ENST00000551092 PABPN1Q86U42 306 aaKnown RBP eCLIP30.32■■■□□ 2.44
ARL1-208ENST00000551092 UNC13AQ9UPW8 1703 aa30.14■■■□□ 2.42
ARL1-208ENST00000551092 MYO15BQ96JP2 1530 aa30.14■■■□□ 2.42
ARL1-208ENST00000551092 BICRAQ9NZM4 1560 aa29.96■■■□□ 2.39
ARL1-208ENST00000551092 ZCCHC6Q5VYS8 1495 aaKnown RBP29.87■■■□□ 2.37
ARL1-208ENST00000551092 DCAF1Q9Y4B6 1507 aa29.76■■■□□ 2.35
ARL1-208ENST00000551092 SCRIBQ14160 1630 aa29.53■■■□□ 2.32
ARL1-208ENST00000551092 SHROOM4Q9ULL8 1493 aa29.46■■■□□ 2.31
ARL1-208ENST00000551092 CC2D2AQ9P2K1 1620 aa29.31■■■□□ 2.28
ARL1-208ENST00000551092 CECR2Q9BXF3 1484 aa29.24■■■□□ 2.27
ARL1-208ENST00000551092 EIF4G1Q04637 1599 aaKnown RBP29.22■■■□□ 2.27
ARL1-208ENST00000551092 NCAPD3P42695 1498 aa28.29■■■□□ 2.12
ARL1-208ENST00000551092 ATAD2BQ9ULI0 1458 aa28.21■■■□□ 2.11
ARL1-208ENST00000551092 SMARCA4P51532 1647 aa28.14■■■□□ 2.1
ARL1-208ENST00000551092 SMARCA2P51531 1590 aa28.09■■■□□ 2.09
ARL1-208ENST00000551092 DNAJC5Q9H3Z4 198 aa28.07■■■□□ 2.08
ARL1-208ENST00000551092 ERCC6Q03468 1493 aa28.03■■■□□ 2.08
ARL1-208ENST00000551092 HMGXB3Q12766 1538 aa28.02■■■□□ 2.08
ARL1-208ENST00000551092 BAZ1AQ9NRL2 1556 aaPredicted RBP27.99■■■□□ 2.07
ARL1-208ENST00000551092 CUX2O14529 1486 aa27.95■■■□□ 2.06
ARL1-208ENST00000551092 BAZ1BQ9UIG0 1483 aaKnown RBP27.93■■■□□ 2.06
ARL1-208ENST00000551092 NESP48681 1621 aa27.9■■■□□ 2.06
ARL1-208ENST00000551092 MROH2BQ7Z745 1585 aa27.84■■■□□ 2.05
ARL1-208ENST00000551092 PEG3Q9GZU2 1588 aa27.83■■■□□ 2.05
ARL1-208ENST00000551092 LAMC3Q9Y6N6 1575 aa27.63■■■□□ 2.01
ARL1-208ENST00000551092 THOC2Q8NI27 1593 aaKnown RBP27.54■■■□□ 2
ARL1-208ENST00000551092 PDS5BQ9NTI5 1447 aa27.51■■□□□ 1.99
ARL1-208ENST00000551092 WIZO95785 1651 aa27.5■■□□□ 1.99
ARL1-208ENST00000551092 KIF21AQ7Z4S6 1674 aa27.49■■□□□ 1.99
ARL1-208ENST00000551092 CADPSQ9ULU8 1353 aa27.47■■□□□ 1.99
ARL1-208ENST00000551092 RSF1Q96T23 1441 aaPredicted RBP27.26■■□□□ 1.95
ARL1-208ENST00000551092 MRC2Q9UBG0 1479 aa27.25■■□□□ 1.95
ARL1-208ENST00000551092 WDR62O43379 1518 aa27.17■■□□□ 1.94
ARL1-208ENST00000551092 CEP164Q9UPV0 1460 aa27.14■■□□□ 1.94
ARL1-208ENST00000551092 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
ARL1-208ENST00000551092 CFTRP13569 1480 aa27.11■■□□□ 1.93
ARL1-208ENST00000551092 TOP2AP11388 1531 aaKnown RBP27.1■■□□□ 1.93
ARL1-208ENST00000551092 URB2Q14146 1524 aaKnown RBP26.91■■□□□ 1.9
ARL1-208ENST00000551092 TRIM41Q8WV44 630 aa26.87■■□□□ 1.89
ARL1-208ENST00000551092 CCDC88BA6NC98 1476 aa26.86■■□□□ 1.89
ARL1-208ENST00000551092 OSCARQ8IYS5 282 aa26.77■■□□□ 1.88
ARL1-208ENST00000551092 PRDM2Q13029 1718 aa26.76■■□□□ 1.88
ARL1-208ENST00000551092 TOPBP1Q92547 1522 aa26.61■■□□□ 1.85
ARL1-208ENST00000551092 IFT140Q96RY7 1462 aa26.61■■□□□ 1.85
ARL1-208ENST00000551092 ZNF608Q9ULD9 1512 aaPredicted RBP26.6■■□□□ 1.85
ARL1-208ENST00000551092 ABCC8Q09428 1581 aa26.53■■□□□ 1.84
ARL1-208ENST00000551092 DNMBPQ6XZF7 1577 aa26.48■■□□□ 1.83
ARL1-208ENST00000551092 EIF4G3O43432 1585 aaKnown RBP26.39■■□□□ 1.82
ARL1-208ENST00000551092 AQRO60306 1485 aaKnown RBP eCLIP26.39■■□□□ 1.828e-6■■■■□ 23.2
ARL1-208ENST00000551092 TARBP1Q13395 1621 aaKnown RBP26.36■■□□□ 1.81
ARL1-208ENST00000551092 RIMBP3CA6NJZ7 1639 aa26.35■■□□□ 1.81
ARL1-208ENST00000551092 RIMBP3BA6NNM3 1639 aa26.35■■□□□ 1.81
ARL1-208ENST00000551092 RIMBP3Q9UFD9 1639 aa26.35■■□□□ 1.81
ARL1-208ENST00000551092 POLA1P09884 1462 aaPredicted RBP26.33■■□□□ 1.81
ARL1-208ENST00000551092 RAD54L2Q9Y4B4 1467 aa26.29■■□□□ 1.8
ARL1-208ENST00000551092 FBLN2P98095 1184 aa26.28■■□□□ 1.8
ARL1-208ENST00000551092 ARHGEF11O15085 1522 aa26.26■■□□□ 1.79
ARL1-208ENST00000551092 SOGA1O94964 1423 aa26.26■■□□□ 1.79
ARL1-208ENST00000551092 TDRD9Q8NDG6 1382 aaKnown RBP26.23■■□□□ 1.79
ARL1-208ENST00000551092 CHD1O14646 1710 aa26.22■■□□□ 1.79
ARL1-208ENST00000551092 CYB5RLQ6IPT4 315 aa26.18■■□□□ 1.78
ARL1-208ENST00000551092 FGD5Q6ZNL6 1462 aa26.17■■□□□ 1.78
ARL1-208ENST00000551092 CUX1P39880 1505 aa26.14■■□□□ 1.78
ARL1-208ENST00000551092 SUPT5HO00267 1087 aaKnown RBP26.13■■□□□ 1.77
ARL1-208ENST00000551092 SNAPC4Q5SXM2 1469 aa26.07■■□□□ 1.76
ARL1-208ENST00000551092 CHMP7Q8WUX9 453 aaPredicted RBP26.05■■□□□ 1.76
ARL1-208ENST00000551092 WDR97A6NE52 1622 aa26.02■■□□□ 1.76
ARL1-208ENST00000551092 ARAP1Q96P48 1450 aa26■■□□□ 1.75
ARL1-208ENST00000551092 GRIN2BQ13224 1484 aa25.99■■□□□ 1.75
ARL1-208ENST00000551092 MAGI1Q96QZ7 1491 aaPredicted RBP25.97■■□□□ 1.75
ARL1-208ENST00000551092 GAPVD1Q14C86 1478 aa25.91■■□□□ 1.74
ARL1-208ENST00000551092 CLASP1Q7Z460 1538 aa25.91■■□□□ 1.74
ARL1-208ENST00000551092 TRHP20396 242 aaPredicted RBP25.9■■□□□ 1.74
ARL1-208ENST00000551092 SYNJ2O15056 1496 aa25.9■■□□□ 1.74
ARL1-208ENST00000551092 SYNJ1O43426 1573 aa25.89■■□□□ 1.73
ARL1-208ENST00000551092 ABCA10Q8WWZ4 1543 aa25.85■■□□□ 1.73
ARL1-208ENST00000551092 PBRM1Q86U86 1689 aa25.85■■□□□ 1.73
ARL1-208ENST00000551092 ABCA5Q8WWZ7 1642 aa25.79■■□□□ 1.72
ARL1-208ENST00000551092 WRNQ14191 1432 aaPredicted RBP eCLIP25.77■■□□□ 1.72
ARL1-208ENST00000551092 TOP2BQ02880 1626 aa25.68■■□□□ 1.7
ARL1-208ENST00000551092 BIVM-ERCC5R4GMW8 1640 aa25.67■■□□□ 1.7
ARL1-208ENST00000551092 GRIN2AQ12879 1464 aa25.65■■□□□ 1.7
ARL1-208ENST00000551092 ADAMTS12P58397 1594 aa25.6■■□□□ 1.69
ARL1-208ENST00000551092 FHAD1B1AJZ9 1412 aa25.57■■□□□ 1.68
ARL1-208ENST00000551092 NUP160Q12769 1436 aa25.56■■□□□ 1.68
ARL1-208ENST00000551092 CEP170Q5SW79 1584 aa25.56■■□□□ 1.68
ARL1-208ENST00000551092 ERCC6L2Q5T890 1561 aa25.56■■□□□ 1.68
ARL1-208ENST00000551092 ERICH3Q5RHP9 1530 aa25.52■■□□□ 1.68
ARL1-208ENST00000551092 SHROOM2Q13796 1616 aa25.42■■□□□ 1.66
ARL1-208ENST00000551092 JPH4Q96JJ6 628 aa25.39■■□□□ 1.66
ARL1-208ENST00000551092 PRG4Q92954 1404 aaPredicted RBP25.37■■□□□ 1.65
ARL1-208ENST00000551092 IGF1RP08069 1367 aa25.27■■□□□ 1.64
ARL1-208ENST00000551092 RUSC2Q8N2Y8 1516 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms