RNA–Protein interactions for RNA: ENST00000551041.6

RPL6-209, Transcript of ribosomal protein L6, humanhuman

TSL 2

Gene RPL6, Length 1,082 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL6-209ENST00000551041 AEBP2Q6ZN18 517 aaPredicted RBP34.73■■■■□ 3.15
RPL6-209ENST00000551041 CHIC1Q5VXU3 224 aa32.79■■■□□ 2.84
RPL6-209ENST00000551041 SENP3Q9H4L4 574 aaPredicted RBP29.31■■■□□ 2.28
RPL6-209ENST00000551041 PHF23Q9BUL5 403 aaPredicted RBP29.06■■■□□ 2.24
RPL6-209ENST00000551041 FOXD1Q16676 465 aa27.53■■■□□ 2
RPL6-209ENST00000551041 NISCHQ9Y2I1 1504 aa26.22■■□□□ 1.79
RPL6-209ENST00000551041 PLPPR3Q6T4P5 718 aa26.06■■□□□ 1.76
RPL6-209ENST00000551041 PPP6R1Q9UPN7 881 aa25.84■■□□□ 1.73
RPL6-209ENST00000551041 ADRA2BP18089 450 aa25.68■■□□□ 1.7
RPL6-209ENST00000551041 PIAS4Q8N2W9 510 aaPredicted RBP25.58■■□□□ 1.69
RPL6-209ENST00000551041 MSH5O43196 834 aa25.52■■□□□ 1.68
RPL6-209ENST00000551041 POTEDQ86YR6 584 aa25.14■■□□□ 1.62
RPL6-209ENST00000551041 MAPK8IP2Q13387 824 aaPredicted RBP23.64■■□□□ 1.37
RPL6-209ENST00000551041 DMRT2Q9Y5R5 561 aa23.34■■□□□ 1.33
RPL6-209ENST00000551041 CCDC180Q9P1Z9 1646 aa23.33■■□□□ 1.33
RPL6-209ENST00000551041 SCAF1Q9H7N4 1312 aaKnown RBP23.14■■□□□ 1.3
RPL6-209ENST00000551041 ABCC9O60706 1549 aa23.04■■□□□ 1.28
RPL6-209ENST00000551041 PPP4R3CPQ6ZMV5 832 aa22.93■■□□□ 1.26
RPL6-209ENST00000551041 HOXD11P31277 338 aaPredicted RBP22.49■■□□□ 1.19
RPL6-209ENST00000551041 CNKSR2Q8WXI2 1034 aa22.43■■□□□ 1.18
RPL6-209ENST00000551041 DCAF8L1A6NGE4 600 aa22.26■■□□□ 1.15
RPL6-209ENST00000551041 RNF216Q9NWF9 866 aaPredicted RBP22.25■■□□□ 1.15
RPL6-209ENST00000551041 RB1CC1Q8TDY2 1594 aa22.07■■□□□ 1.12
RPL6-209ENST00000551041 NACADO15069 1562 aa22.02■■□□□ 1.12
RPL6-209ENST00000551041 DCAF8L2P0C7V8 631 aa22.01■■□□□ 1.11
RPL6-209ENST00000551041 CACNB1Q02641 598 aaPredicted RBP21.95■■□□□ 1.1
RPL6-209ENST00000551041 RNF39Q9H2S5 420 aa21.94■■□□□ 1.1
RPL6-209ENST00000551041 MYO15BQ96JP2 1530 aa21.85■■□□□ 1.09
RPL6-209ENST00000551041 NCBP3Q53F19 620 aaKnown RBP21.84■■□□□ 1.09
RPL6-209ENST00000551041 ZCCHC6Q5VYS8 1495 aaKnown RBP21.78■■□□□ 1.08
RPL6-209ENST00000551041 NPM3O75607 178 aaKnown RBP21.78■■□□□ 1.08
RPL6-209ENST00000551041 DCAF1Q9Y4B6 1507 aa21.69■■□□□ 1.06
RPL6-209ENST00000551041 DNAJC5BQ9UF47 199 aa21.59■■□□□ 1.05
RPL6-209ENST00000551041 PABPN1Q86U42 306 aaKnown RBP eCLIP21.54■■□□□ 1.04
RPL6-209ENST00000551041 UNC13AQ9UPW8 1703 aa21.52■■□□□ 1.04
RPL6-209ENST00000551041 C1QBPQ07021 282 aaKnown RBP21.48■■□□□ 1.03
RPL6-209ENST00000551041 BICRAQ9NZM4 1560 aa21.44■■□□□ 1.02
RPL6-209ENST00000551041 KCNA4P22459 653 aa21.41■■□□□ 1.02
RPL6-209ENST00000551041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.29■■□□□ 16e-13■□□□□ 9.8
RPL6-209ENST00000551041 SCRIBQ14160 1630 aa21.28■■□□□ 1
RPL6-209ENST00000551041 SHROOM4Q9ULL8 1493 aa21.18■□□□□ 0.98
RPL6-209ENST00000551041 U3KPZ7 1027 aaPredicted RBP21.03■□□□□ 0.96
RPL6-209ENST00000551041 SLC4A2P04920 1241 aa20.9■□□□□ 0.94
RPL6-209ENST00000551041 EIF4G1Q04637 1599 aaKnown RBP20.86■□□□□ 0.93
RPL6-209ENST00000551041 CC2D2AQ9P2K1 1620 aa20.82■□□□□ 0.92
RPL6-209ENST00000551041 SPINK5Q9NQ38 1064 aaPredicted RBP20.76■□□□□ 0.91
RPL6-209ENST00000551041 CECR2Q9BXF3 1484 aa20.73■□□□□ 0.91
RPL6-209ENST00000551041 DSG3P32926 999 aa20.55■□□□□ 0.88
RPL6-209ENST00000551041 CAPN15O75808 1086 aa20.53■□□□□ 0.88
RPL6-209ENST00000551041 NCAPD3P42695 1498 aa20.36■□□□□ 0.85
RPL6-209ENST00000551041 SMARCA4P51532 1647 aa20.35■□□□□ 0.85
RPL6-209ENST00000551041 ATAD2BQ9ULI0 1458 aa20.32■□□□□ 0.84
RPL6-209ENST00000551041 BAZ1AQ9NRL2 1556 aaPredicted RBP20.31■□□□□ 0.84
RPL6-209ENST00000551041 SMARCA2P51531 1590 aa20.27■□□□□ 0.84
RPL6-209ENST00000551041 TRHP20396 242 aaPredicted RBP20.23■□□□□ 0.83
RPL6-209ENST00000551041 MROH2BQ7Z745 1585 aa20.21■□□□□ 0.83
RPL6-209ENST00000551041 HMGXB3Q12766 1538 aa20.19■□□□□ 0.82
RPL6-209ENST00000551041 ABCB7O75027 752 aa20.18■□□□□ 0.82
RPL6-209ENST00000551041 PEG3Q9GZU2 1588 aa20.17■□□□□ 0.82
RPL6-209ENST00000551041 BAZ1BQ9UIG0 1483 aaKnown RBP20.12■□□□□ 0.81
RPL6-209ENST00000551041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.1■□□□□ 0.81
RPL6-209ENST00000551041 HNRNPUL2Q1KMD3 747 aaKnown RBP20.1■□□□□ 0.81
RPL6-209ENST00000551041 ZNF219Q9P2Y4 722 aaPredicted RBP20.1■□□□□ 0.81
RPL6-209ENST00000551041 SAMD1Q6SPF0 538 aaPredicted RBP20.07■□□□□ 0.8
RPL6-209ENST00000551041 SLC4A1APQ9BWU0 796 aaKnown RBP20.06■□□□□ 0.8
RPL6-209ENST00000551041 APLP2Q06481 763 aa20.03■□□□□ 0.8
RPL6-209ENST00000551041 MYCNP04198 464 aaPredicted RBP20■□□□□ 0.79
RPL6-209ENST00000551041 WIZO95785 1651 aa19.95■□□□□ 0.78
RPL6-209ENST00000551041 RSF1Q96T23 1441 aaPredicted RBP19.93■□□□□ 0.78
RPL6-209ENST00000551041 NESP48681 1621 aa19.9■□□□□ 0.78
RPL6-209ENST00000551041 ERCC6Q03468 1493 aa19.86■□□□□ 0.77
RPL6-209ENST00000551041 FOXD4L1Q9NU39 408 aa19.83■□□□□ 0.77
RPL6-209ENST00000551041 ATF5Q9Y2D1 282 aaPredicted RBP19.83■□□□□ 0.77
RPL6-209ENST00000551041 ZBTB22O15209 634 aa19.82■□□□□ 0.76
RPL6-209ENST00000551041 EHMT2Q96KQ7 1210 aa19.81■□□□□ 0.76
RPL6-209ENST00000551041 LAMC3Q9Y6N6 1575 aa19.79■□□□□ 0.76
RPL6-209ENST00000551041 CADPSQ9ULU8 1353 aa19.75■□□□□ 0.75
RPL6-209ENST00000551041 TOP2AP11388 1531 aaKnown RBP19.73■□□□□ 0.75
RPL6-209ENST00000551041 POLA2Q14181 598 aa19.73■□□□□ 0.75
RPL6-209ENST00000551041 CUX2O14529 1486 aa19.73■□□□□ 0.75
RPL6-209ENST00000551041 PDS5BQ9NTI5 1447 aa19.7■□□□□ 0.74
RPL6-209ENST00000551041 POTEHQ6S545 545 aa19.63■□□□□ 0.73
RPL6-209ENST00000551041 KIF21AQ7Z4S6 1674 aa19.6■□□□□ 0.73
RPL6-209ENST00000551041 THOC2Q8NI27 1593 aaKnown RBP19.59■□□□□ 0.73
RPL6-209ENST00000551041 CFTRP13569 1480 aa19.59■□□□□ 0.73
RPL6-209ENST00000551041 CCDC88BA6NC98 1476 aa19.54■□□□□ 0.72
RPL6-209ENST00000551041 CSRNP3Q8WYN3 585 aa19.52■□□□□ 0.72
RPL6-209ENST00000551041 FANCD2Q9BXW9 1451 aa19.49■□□□□ 0.71
RPL6-209ENST00000551041 MRC2Q9UBG0 1479 aa19.49■□□□□ 0.71
RPL6-209ENST00000551041 CEP164Q9UPV0 1460 aa19.48■□□□□ 0.71
RPL6-209ENST00000551041 WDR62O43379 1518 aa19.42■□□□□ 0.7
RPL6-209ENST00000551041 DNAJC5Q9H3Z4 198 aa19.4■□□□□ 0.7
RPL6-209ENST00000551041 RBM42Q9BTD8 480 aaKnown RBP19.36■□□□□ 0.69
RPL6-209ENST00000551041 PRDM2Q13029 1718 aa19.33■□□□□ 0.68
RPL6-209ENST00000551041 URB2Q14146 1524 aaKnown RBP19.32■□□□□ 0.68
RPL6-209ENST00000551041 SUPT5HO00267 1087 aaKnown RBP19.3■□□□□ 0.68
RPL6-209ENST00000551041 TOPBP1Q92547 1522 aa19.16■□□□□ 0.66
RPL6-209ENST00000551041 ABCC8Q09428 1581 aa19.16■□□□□ 0.66
RPL6-209ENST00000551041 ATXN8OSP0DMR3 200 aa19.16■□□□□ 0.66
RPL6-209ENST00000551041 OSCARQ8IYS5 282 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms