RNA–Protein interactions for RNA: ENST00000550925.2

SH2B3-203, Transcript of SH2B adaptor protein 3, humanhuman

TSL 5

Gene SH2B3, Length 648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-203ENST00000550925 NISCHQ9Y2I1 1504 aa49.51■■■■■ 5.52
SH2B3-203ENST00000550925 CCDC180Q9P1Z9 1646 aa43.84■■■■■ 4.61
SH2B3-203ENST00000550925 ABCC9O60706 1549 aa42.07■■■■■ 4.33
SH2B3-203ENST00000550925 ZCCHC6Q5VYS8 1495 aaKnown RBP41.43■■■■■ 4.22
SH2B3-203ENST00000550925 DCAF1Q9Y4B6 1507 aa41.09■■■■■ 4.17
SH2B3-203ENST00000550925 MYO15BQ96JP2 1530 aa41.04■■■■■ 4.16
SH2B3-203ENST00000550925 NACADO15069 1562 aa41■■■■■ 4.15
SH2B3-203ENST00000550925 RB1CC1Q8TDY2 1594 aa40.87■■■■■ 4.13
SH2B3-203ENST00000550925 DCAF8L2P0C7V8 631 aa40.83■■■■■ 4.13
SH2B3-203ENST00000550925 UNC13AQ9UPW8 1703 aa39.96■■■■□ 3.99
SH2B3-203ENST00000550925 SCRIBQ14160 1630 aa39.92■■■■□ 3.98
SH2B3-203ENST00000550925 BICRAQ9NZM4 1560 aa39.6■■■■□ 3.93
SH2B3-203ENST00000550925 SHROOM4Q9ULL8 1493 aa39.37■■■■□ 3.89
SH2B3-203ENST00000550925 PABPN1Q86U42 306 aaKnown RBP eCLIP39.33■■■■□ 3.89
SH2B3-203ENST00000550925 EIF4G1Q04637 1599 aaKnown RBP38.5■■■■□ 3.75
SH2B3-203ENST00000550925 CECR2Q9BXF3 1484 aa38.43■■■■□ 3.74
SH2B3-203ENST00000550925 BAZ1AQ9NRL2 1556 aaPredicted RBP38.36■■■■□ 3.73
SH2B3-203ENST00000550925 SMARCA4P51532 1647 aa38.3■■■■□ 3.72
SH2B3-203ENST00000550925 CC2D2AQ9P2K1 1620 aa38.16■■■■□ 3.7
SH2B3-203ENST00000550925 MROH2BQ7Z745 1585 aa38.14■■■■□ 3.7
SH2B3-203ENST00000550925 PEG3Q9GZU2 1588 aa37.98■■■■□ 3.67
SH2B3-203ENST00000550925 RSF1Q96T23 1441 aaPredicted RBP37.94■■■■□ 3.66
SH2B3-203ENST00000550925 DNAJC5BQ9UF47 199 aa37.93■■■■□ 3.66
SH2B3-203ENST00000550925 SMARCA2P51531 1590 aa37.93■■■■□ 3.66
SH2B3-203ENST00000550925 ATAD2BQ9ULI0 1458 aa37.9■■■■□ 3.66
SH2B3-203ENST00000550925 NCAPD3P42695 1498 aa37.79■■■■□ 3.64
SH2B3-203ENST00000550925 WIZO95785 1651 aa37.76■■■■□ 3.63
SH2B3-203ENST00000550925 HMGXB3Q12766 1538 aa37.73■■■■□ 3.63
SH2B3-203ENST00000550925 BAZ1BQ9UIG0 1483 aaKnown RBP37.62■■■■□ 3.61
SH2B3-203ENST00000550925 TOP2AP11388 1531 aaKnown RBP37.46■■■■□ 3.59
SH2B3-203ENST00000550925 SUPT5HO00267 1087 aaKnown RBP37.29■■■■□ 3.56
SH2B3-203ENST00000550925 CCDC88BA6NC98 1476 aa36.94■■■■□ 3.5
SH2B3-203ENST00000550925 LAMC3Q9Y6N6 1575 aa36.72■■■■□ 3.47
SH2B3-203ENST00000550925 CADPSQ9ULU8 1353 aa36.68■■■■□ 3.46
SH2B3-203ENST00000550925 CFTRP13569 1480 aa36.65■■■■□ 3.46
SH2B3-203ENST00000550925 NESP48681 1621 aa36.6■■■■□ 3.45
SH2B3-203ENST00000550925 PRDM2Q13029 1718 aa36.51■■■■□ 3.44
SH2B3-203ENST00000550925 PDS5BQ9NTI5 1447 aa36.39■■■■□ 3.42
SH2B3-203ENST00000550925 FANCD2Q9BXW9 1451 aa36.27■■■■□ 3.4
SH2B3-203ENST00000550925 KIF21AQ7Z4S6 1674 aa36.26■■■■□ 3.4
SH2B3-203ENST00000550925 ERCC6Q03468 1493 aa36.23■■■■□ 3.39
SH2B3-203ENST00000550925 CEP164Q9UPV0 1460 aa36.18■■■■□ 3.38
SH2B3-203ENST00000550925 THOC2Q8NI27 1593 aaKnown RBP36.03■■■■□ 3.36
SH2B3-203ENST00000550925 MRC2Q9UBG0 1479 aa36.01■■■■□ 3.36
SH2B3-203ENST00000550925 WDR62O43379 1518 aa35.91■■■■□ 3.34
SH2B3-203ENST00000550925 URB2Q14146 1524 aaKnown RBP35.88■■■■□ 3.33
SH2B3-203ENST00000550925 ABCC8Q09428 1581 aa35.85■■■■□ 3.33
SH2B3-203ENST00000550925 DNMBPQ6XZF7 1577 aa35.84■■■■□ 3.33
SH2B3-203ENST00000550925 TOPBP1Q92547 1522 aa35.78■■■■□ 3.32
SH2B3-203ENST00000550925 WRNQ14191 1432 aaPredicted RBP eCLIP35.75■■■■□ 3.313e-6■■■■□ 26.3
SH2B3-203ENST00000550925 CUX1P39880 1505 aa35.75■■■■□ 3.31
SH2B3-203ENST00000550925 CUX2O14529 1486 aa35.7■■■■□ 3.31
SH2B3-203ENST00000550925 BIVM-ERCC5R4GMW8 1640 aa35.68■■■■□ 3.3
SH2B3-203ENST00000550925 TOP2BQ02880 1626 aa35.66■■■■□ 3.3
SH2B3-203ENST00000550925 SYNJ1O43426 1573 aa35.66■■■■□ 3.3
SH2B3-203ENST00000550925 POLA1P09884 1462 aaPredicted RBP35.53■■■■□ 3.28
SH2B3-203ENST00000550925 FGD5Q6ZNL6 1462 aa35.52■■■■□ 3.28
SH2B3-203ENST00000550925 IFT140Q96RY7 1462 aa35.41■■■■□ 3.26
SH2B3-203ENST00000550925 TARBP1Q13395 1621 aaKnown RBP35.38■■■■□ 3.25
SH2B3-203ENST00000550925 SOGA1O94964 1423 aa35.33■■■■□ 3.25
SH2B3-203ENST00000550925 RAD54L2Q9Y4B4 1467 aa35.29■■■■□ 3.24
SH2B3-203ENST00000550925 WDR97A6NE52 1622 aa35.29■■■■□ 3.24
SH2B3-203ENST00000550925 CHIC1Q5VXU3 224 aa35.26■■■■□ 3.24
SH2B3-203ENST00000550925 ABCA10Q8WWZ4 1543 aa35.26■■■■□ 3.23
SH2B3-203ENST00000550925 TRIM41Q8WV44 630 aa35.24■■■■□ 3.23
SH2B3-203ENST00000550925 ZNF608Q9ULD9 1512 aaPredicted RBP35.13■■■■□ 3.21
SH2B3-203ENST00000550925 EIF4G3O43432 1585 aaKnown RBP35.11■■■■□ 3.21
SH2B3-203ENST00000550925 ABCA5Q8WWZ7 1642 aa35.09■■■■□ 3.21
SH2B3-203ENST00000550925 TDRD9Q8NDG6 1382 aaKnown RBP35.01■■■■□ 3.2
SH2B3-203ENST00000550925 AQRO60306 1485 aaKnown RBP eCLIP34.99■■■■□ 3.19
SH2B3-203ENST00000550925 GAPVD1Q14C86 1478 aa34.97■■■■□ 3.19
SH2B3-203ENST00000550925 KIF27Q86VH2 1401 aa34.96■■■■□ 3.19
SH2B3-203ENST00000550925 PBRM1Q86U86 1689 aa34.92■■■■□ 3.18
SH2B3-203ENST00000550925 GRIN2BQ13224 1484 aa34.9■■■■□ 3.18
SH2B3-203ENST00000550925 ERICH3Q5RHP9 1530 aa34.86■■■■□ 3.17
SH2B3-203ENST00000550925 EEA1Q15075 1411 aa34.78■■■■□ 3.16
SH2B3-203ENST00000550925 MAGI1Q96QZ7 1491 aaPredicted RBP34.78■■■■□ 3.16
SH2B3-203ENST00000550925 RUSC2Q8N2Y8 1516 aa34.76■■■■□ 3.16
SH2B3-203ENST00000550925 SNAPC4Q5SXM2 1469 aa34.74■■■■□ 3.15
SH2B3-203ENST00000550925 IGF1RP08069 1367 aa34.7■■■■□ 3.15
SH2B3-203ENST00000550925 ADAMTS12P58397 1594 aa34.7■■■■□ 3.14
SH2B3-203ENST00000550925 CUL7Q14999 1698 aa34.69■■■■□ 3.14
SH2B3-203ENST00000550925 DNAJC5Q9H3Z4 198 aa34.65■■■■□ 3.14
SH2B3-203ENST00000550925 SYNJ2O15056 1496 aa34.61■■■■□ 3.13
SH2B3-203ENST00000550925 FHAD1B1AJZ9 1412 aa34.61■■■■□ 3.13
SH2B3-203ENST00000550925 CHD1O14646 1710 aa34.52■■■■□ 3.12
SH2B3-203ENST00000550925 CARMIL1Q5VZK9 1371 aa34.5■■■■□ 3.11
SH2B3-203ENST00000550925 CSRNP3Q8WYN3 585 aa34.5■■■■□ 3.11
SH2B3-203ENST00000550925 PRXQ9BXM0 1461 aa34.48■■■■□ 3.11
SH2B3-203ENST00000550925 GRIN2AQ12879 1464 aa34.46■■■■□ 3.11
SH2B3-203ENST00000550925 RAPGEF2Q9Y4G8 1499 aa34.41■■■■□ 3.1
SH2B3-203ENST00000550925 FAM9AQ8IZU1 332 aaPredicted RBP34.41■■■■□ 3.1
SH2B3-203ENST00000550925 CHMP7Q8WUX9 453 aaPredicted RBP34.41■■■■□ 3.1
SH2B3-203ENST00000550925 KIF21BO75037 1637 aa34.39■■■■□ 3.1
SH2B3-203ENST00000550925 FBLN2P98095 1184 aa34.34■■■■□ 3.09
SH2B3-203ENST00000550925 NUP160Q12769 1436 aa34.3■■■■□ 3.08
SH2B3-203ENST00000550925 CEP170Q5SW79 1584 aa34.26■■■■□ 3.07
SH2B3-203ENST00000550925 OSCARQ8IYS5 282 aa34.2■■■■□ 3.07
SH2B3-203ENST00000550925 CLASP1Q7Z460 1538 aa34.2■■■■□ 3.06
SH2B3-203ENST00000550925 GOLGA3Q08378 1498 aa34.18■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms