RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 NISCHQ9Y2I1 1504 aa28.99■■■□□ 2.23
ERBB3-216ENST00000550869 CCDC180Q9P1Z9 1646 aa26.13■■□□□ 1.77
ERBB3-216ENST00000550869 ABCC9O60706 1549 aa25.98■■□□□ 1.75
ERBB3-216ENST00000550869 RB1CC1Q8TDY2 1594 aa24.84■■□□□ 1.57
ERBB3-216ENST00000550869 NACADO15069 1562 aa24.68■■□□□ 1.54
ERBB3-216ENST00000550869 MYO15BQ96JP2 1530 aa24.37■■□□□ 1.49
ERBB3-216ENST00000550869 DCAF8L2P0C7V8 631 aa24.33■■□□□ 1.49
ERBB3-216ENST00000550869 DNAJC5BQ9UF47 199 aa24.33■■□□□ 1.49
ERBB3-216ENST00000550869 UNC13AQ9UPW8 1703 aa24.27■■□□□ 1.48
ERBB3-216ENST00000550869 PABPN1Q86U42 306 aaKnown RBP eCLIP24.12■■□□□ 1.45
ERBB3-216ENST00000550869 BICRAQ9NZM4 1560 aa24.06■■□□□ 1.44
ERBB3-216ENST00000550869 ZCCHC6Q5VYS8 1495 aaKnown RBP24.03■■□□□ 1.44
ERBB3-216ENST00000550869 DCAF1Q9Y4B6 1507 aa24.03■■□□□ 1.44
ERBB3-216ENST00000550869 SHROOM4Q9ULL8 1493 aa23.88■■□□□ 1.41
ERBB3-216ENST00000550869 SCRIBQ14160 1630 aa23.68■■□□□ 1.38
ERBB3-216ENST00000550869 CC2D2AQ9P2K1 1620 aa23.54■■□□□ 1.36
ERBB3-216ENST00000550869 EIF4G1Q04637 1599 aaKnown RBP23.5■■□□□ 1.35
ERBB3-216ENST00000550869 CECR2Q9BXF3 1484 aa23.46■■□□□ 1.35
ERBB3-216ENST00000550869 NCAPD3P42695 1498 aa22.74■■□□□ 1.23
ERBB3-216ENST00000550869 SMARCA4P51532 1647 aa22.64■■□□□ 1.22
ERBB3-216ENST00000550869 ATAD2BQ9ULI0 1458 aa22.64■■□□□ 1.21
ERBB3-216ENST00000550869 SMARCA2P51531 1590 aa22.63■■□□□ 1.21
ERBB3-216ENST00000550869 HMGXB3Q12766 1538 aa22.62■■□□□ 1.21
ERBB3-216ENST00000550869 BAZ1AQ9NRL2 1556 aaPredicted RBP22.55■■□□□ 1.2
ERBB3-216ENST00000550869 CUX2O14529 1486 aa22.53■■□□□ 1.2
ERBB3-216ENST00000550869 ERCC6Q03468 1493 aa22.49■■□□□ 1.19
ERBB3-216ENST00000550869 PEG3Q9GZU2 1588 aa22.47■■□□□ 1.19
ERBB3-216ENST00000550869 DNAJC5Q9H3Z4 198 aa22.46■■□□□ 1.19
ERBB3-216ENST00000550869 BAZ1BQ9UIG0 1483 aaKnown RBP22.44■■□□□ 1.18
ERBB3-216ENST00000550869 NESP48681 1621 aa22.3■■□□□ 1.16
ERBB3-216ENST00000550869 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
ERBB3-216ENST00000550869 LAMC3Q9Y6N6 1575 aa22.28■■□□□ 1.16
ERBB3-216ENST00000550869 THOC2Q8NI27 1593 aaKnown RBP22.18■■□□□ 1.14
ERBB3-216ENST00000550869 PDS5BQ9NTI5 1447 aa22.12■■□□□ 1.13
ERBB3-216ENST00000550869 KIF21AQ7Z4S6 1674 aa22.11■■□□□ 1.13
ERBB3-216ENST00000550869 WIZO95785 1651 aa22.03■■□□□ 1.12
ERBB3-216ENST00000550869 CADPSQ9ULU8 1353 aa22.02■■□□□ 1.12
ERBB3-216ENST00000550869 MRC2Q9UBG0 1479 aa21.91■■□□□ 1.1
ERBB3-216ENST00000550869 WDR62O43379 1518 aa21.89■■□□□ 1.09
ERBB3-216ENST00000550869 RSF1Q96T23 1441 aaPredicted RBP21.83■■□□□ 1.09
ERBB3-216ENST00000550869 CEP164Q9UPV0 1460 aa21.82■■□□□ 1.08
ERBB3-216ENST00000550869 TOP2AP11388 1531 aaKnown RBP21.8■■□□□ 1.08
ERBB3-216ENST00000550869 CFTRP13569 1480 aa21.79■■□□□ 1.08
ERBB3-216ENST00000550869 FANCD2Q9BXW9 1451 aa21.77■■□□□ 1.08
ERBB3-216ENST00000550869 PRDM2Q13029 1718 aa21.66■■□□□ 1.06
ERBB3-216ENST00000550869 SUPT5HO00267 1087 aaKnown RBP21.6■■□□□ 1.05
ERBB3-216ENST00000550869 URB2Q14146 1524 aaKnown RBP21.58■■□□□ 1.04
ERBB3-216ENST00000550869 CCDC88BA6NC98 1476 aa21.5■■□□□ 1.03
ERBB3-216ENST00000550869 OSCARQ8IYS5 282 aa21.42■■□□□ 1.02
ERBB3-216ENST00000550869 IFT140Q96RY7 1462 aa21.39■■□□□ 1.02
ERBB3-216ENST00000550869 TRIM41Q8WV44 630 aa21.39■■□□□ 1.01
ERBB3-216ENST00000550869 ABCC8Q09428 1581 aa21.39■■□□□ 1.01
ERBB3-216ENST00000550869 TOPBP1Q92547 1522 aa21.35■■□□□ 1.01
ERBB3-216ENST00000550869 DNMBPQ6XZF7 1577 aa21.31■■□□□ 1
ERBB3-216ENST00000550869 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
ERBB3-216ENST00000550869 EIF4G3O43432 1585 aaKnown RBP21.24■□□□□ 0.99
ERBB3-216ENST00000550869 TARBP1Q13395 1621 aaKnown RBP21.2■□□□□ 0.98
ERBB3-216ENST00000550869 RIMBP3CA6NJZ7 1639 aa21.16■□□□□ 0.98
ERBB3-216ENST00000550869 RIMBP3BA6NNM3 1639 aa21.16■□□□□ 0.98
ERBB3-216ENST00000550869 RIMBP3Q9UFD9 1639 aa21.16■□□□□ 0.98
ERBB3-216ENST00000550869 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
ERBB3-216ENST00000550869 ARHGEF11O15085 1522 aa21.09■□□□□ 0.97
ERBB3-216ENST00000550869 CHD1O14646 1710 aa21.09■□□□□ 0.97
ERBB3-216ENST00000550869 WDR97A6NE52 1622 aa21.08■□□□□ 0.97
ERBB3-216ENST00000550869 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.968e-7■■■■□ 21.5
ERBB3-216ENST00000550869 SOGA1O94964 1423 aa21.02■□□□□ 0.96
ERBB3-216ENST00000550869 RAD54L2Q9Y4B4 1467 aa21■□□□□ 0.95
ERBB3-216ENST00000550869 FGD5Q6ZNL6 1462 aa20.99■□□□□ 0.95
ERBB3-216ENST00000550869 CUX1P39880 1505 aa20.96■□□□□ 0.95
ERBB3-216ENST00000550869 TDRD9Q8NDG6 1382 aaKnown RBP20.94■□□□□ 0.94
ERBB3-216ENST00000550869 FBLN2P98095 1184 aa20.92■□□□□ 0.94
ERBB3-216ENST00000550869 MAGI1Q96QZ7 1491 aaPredicted RBP20.91■□□□□ 0.94
ERBB3-216ENST00000550869 SNAPC4Q5SXM2 1469 aa20.9■□□□□ 0.94
ERBB3-216ENST00000550869 GRIN2BQ13224 1484 aa20.88■□□□□ 0.93
ERBB3-216ENST00000550869 ARAP1Q96P48 1450 aa20.87■□□□□ 0.93
ERBB3-216ENST00000550869 CYB5RLQ6IPT4 315 aa20.86■□□□□ 0.93
ERBB3-216ENST00000550869 SYNJ1O43426 1573 aa20.85■□□□□ 0.93
ERBB3-216ENST00000550869 CLASP1Q7Z460 1538 aa20.85■□□□□ 0.93
ERBB3-216ENST00000550869 PBRM1Q86U86 1689 aa20.83■□□□□ 0.92
ERBB3-216ENST00000550869 SYNJ2O15056 1496 aa20.82■□□□□ 0.92
ERBB3-216ENST00000550869 CHMP7Q8WUX9 453 aaPredicted RBP20.81■□□□□ 0.92
ERBB3-216ENST00000550869 GAPVD1Q14C86 1478 aa20.79■□□□□ 0.92
ERBB3-216ENST00000550869 ABCA10Q8WWZ4 1543 aa20.78■□□□□ 0.92
ERBB3-216ENST00000550869 ABCA5Q8WWZ7 1642 aa20.77■□□□□ 0.92
ERBB3-216ENST00000550869 WRNQ14191 1432 aaPredicted RBP eCLIP20.69■□□□□ 0.9
ERBB3-216ENST00000550869 BIVM-ERCC5R4GMW8 1640 aa20.68■□□□□ 0.9
ERBB3-216ENST00000550869 TOP2BQ02880 1626 aa20.67■□□□□ 0.9
ERBB3-216ENST00000550869 TRHP20396 242 aaPredicted RBP20.64■□□□□ 0.89
ERBB3-216ENST00000550869 GRIN2AQ12879 1464 aa20.61■□□□□ 0.89
ERBB3-216ENST00000550869 ADAMTS12P58397 1594 aa20.6■□□□□ 0.89
ERBB3-216ENST00000550869 CHIC1Q5VXU3 224 aa20.59■□□□□ 0.89
ERBB3-216ENST00000550869 ERICH3Q5RHP9 1530 aa20.56■□□□□ 0.88
ERBB3-216ENST00000550869 NUP160Q12769 1436 aa20.54■□□□□ 0.88
ERBB3-216ENST00000550869 FHAD1B1AJZ9 1412 aa20.53■□□□□ 0.88
ERBB3-216ENST00000550869 CEP170Q5SW79 1584 aa20.51■□□□□ 0.87
ERBB3-216ENST00000550869 SHROOM2Q13796 1616 aa20.49■□□□□ 0.87
ERBB3-216ENST00000550869 ERCC6L2Q5T890 1561 aa20.44■□□□□ 0.86
ERBB3-216ENST00000550869 RUSC2Q8N2Y8 1516 aa20.32■□□□□ 0.84
ERBB3-216ENST00000550869 PRG4Q92954 1404 aaPredicted RBP20.31■□□□□ 0.84
ERBB3-216ENST00000550869 CUL7Q14999 1698 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms