RNA–Protein interactions for RNA: ENST00000550554.5

AL928654.4-205, humanhuman

APPRIS ALT2 TSL 3

Gene AL928654.4, Length 613 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL928654.4-205ENST00000550554 NISCHQ9Y2I1 1504 aa41.07■■■■■ 4.16
AL928654.4-205ENST00000550554 ABCC9O60706 1549 aa36.98■■■■□ 3.51
AL928654.4-205ENST00000550554 CCDC180Q9P1Z9 1646 aa36.92■■■■□ 3.5
AL928654.4-205ENST00000550554 RB1CC1Q8TDY2 1594 aa35.17■■■■□ 3.22
AL928654.4-205ENST00000550554 NACADO15069 1562 aa34.88■■■■□ 3.17
AL928654.4-205ENST00000550554 DCAF8L2P0C7V8 631 aa34.8■■■■□ 3.16
AL928654.4-205ENST00000550554 DNAJC5BQ9UF47 199 aa34.69■■■■□ 3.14
AL928654.4-205ENST00000550554 UNC13AQ9UPW8 1703 aa34.46■■■■□ 3.11
AL928654.4-205ENST00000550554 PABPN1Q86U42 306 aaKnown RBP eCLIP34.42■■■■□ 3.1
AL928654.4-205ENST00000550554 MYO15BQ96JP2 1530 aa34.32■■■■□ 3.08
AL928654.4-205ENST00000550554 BICRAQ9NZM4 1560 aa34.12■■■■□ 3.05
AL928654.4-205ENST00000550554 ZCCHC6Q5VYS8 1495 aaKnown RBP34.01■■■■□ 3.04
AL928654.4-205ENST00000550554 DCAF1Q9Y4B6 1507 aa33.89■■■■□ 3.02
AL928654.4-205ENST00000550554 SCRIBQ14160 1630 aa33.68■■■□□ 2.98
AL928654.4-205ENST00000550554 SHROOM4Q9ULL8 1493 aa33.6■■■□□ 2.97
AL928654.4-205ENST00000550554 CC2D2AQ9P2K1 1620 aa33.41■■■□□ 2.94
AL928654.4-205ENST00000550554 EIF4G1Q04637 1599 aaKnown RBP33.3■■■□□ 2.92
AL928654.4-205ENST00000550554 CECR2Q9BXF3 1484 aa33.3■■■□□ 2.92
AL928654.4-205ENST00000550554 NCAPD3P42695 1498 aa32.16■■■□□ 2.74
AL928654.4-205ENST00000550554 ATAD2BQ9ULI0 1458 aa32.09■■■□□ 2.73
AL928654.4-205ENST00000550554 SMARCA4P51532 1647 aa32.08■■■□□ 2.73
AL928654.4-205ENST00000550554 SMARCA2P51531 1590 aa32.02■■■□□ 2.72
AL928654.4-205ENST00000550554 ERCC6Q03468 1493 aa31.95■■■□□ 2.7
AL928654.4-205ENST00000550554 HMGXB3Q12766 1538 aa31.95■■■□□ 2.7
AL928654.4-205ENST00000550554 BAZ1AQ9NRL2 1556 aaPredicted RBP31.9■■■□□ 2.7
AL928654.4-205ENST00000550554 DNAJC5Q9H3Z4 198 aa31.89■■■□□ 2.7
AL928654.4-205ENST00000550554 CUX2O14529 1486 aa31.85■■■□□ 2.69
AL928654.4-205ENST00000550554 BAZ1BQ9UIG0 1483 aaKnown RBP31.81■■■□□ 2.68
AL928654.4-205ENST00000550554 NESP48681 1621 aa31.75■■■□□ 2.67
AL928654.4-205ENST00000550554 PEG3Q9GZU2 1588 aa31.72■■■□□ 2.67
AL928654.4-205ENST00000550554 MROH2BQ7Z745 1585 aa31.66■■■□□ 2.66
AL928654.4-205ENST00000550554 LAMC3Q9Y6N6 1575 aa31.51■■■□□ 2.63
AL928654.4-205ENST00000550554 THOC2Q8NI27 1593 aaKnown RBP31.43■■■□□ 2.62
AL928654.4-205ENST00000550554 KIF21AQ7Z4S6 1674 aa31.4■■■□□ 2.62
AL928654.4-205ENST00000550554 WIZO95785 1651 aa31.33■■■□□ 2.61
AL928654.4-205ENST00000550554 PDS5BQ9NTI5 1447 aa31.32■■■□□ 2.6
AL928654.4-205ENST00000550554 CADPSQ9ULU8 1353 aa31.21■■■□□ 2.59
AL928654.4-205ENST00000550554 MRC2Q9UBG0 1479 aa31.05■■■□□ 2.56
AL928654.4-205ENST00000550554 WDR62O43379 1518 aa30.96■■■□□ 2.55
AL928654.4-205ENST00000550554 RSF1Q96T23 1441 aaPredicted RBP30.96■■■□□ 2.55
AL928654.4-205ENST00000550554 CEP164Q9UPV0 1460 aa30.94■■■□□ 2.54
AL928654.4-205ENST00000550554 FANCD2Q9BXW9 1451 aa30.89■■■□□ 2.53
AL928654.4-205ENST00000550554 TOP2AP11388 1531 aaKnown RBP30.88■■■□□ 2.53
AL928654.4-205ENST00000550554 CFTRP13569 1480 aa30.83■■■□□ 2.53
AL928654.4-205ENST00000550554 PRDM2Q13029 1718 aa30.66■■■□□ 2.5
AL928654.4-205ENST00000550554 URB2Q14146 1524 aaKnown RBP30.63■■■□□ 2.49
AL928654.4-205ENST00000550554 TRIM41Q8WV44 630 aa30.57■■■□□ 2.48
AL928654.4-205ENST00000550554 CCDC88BA6NC98 1476 aa30.53■■■□□ 2.48
AL928654.4-205ENST00000550554 OSCARQ8IYS5 282 aa30.42■■■□□ 2.46
AL928654.4-205ENST00000550554 IFT140Q96RY7 1462 aa30.3■■■□□ 2.44
AL928654.4-205ENST00000550554 TOPBP1Q92547 1522 aa30.29■■■□□ 2.44
AL928654.4-205ENST00000550554 ZNF608Q9ULD9 1512 aaPredicted RBP30.27■■■□□ 2.44
AL928654.4-205ENST00000550554 ABCC8Q09428 1581 aa30.22■■■□□ 2.43
AL928654.4-205ENST00000550554 DNMBPQ6XZF7 1577 aa30.19■■■□□ 2.42
AL928654.4-205ENST00000550554 EIF4G3O43432 1585 aaKnown RBP30.12■■■□□ 2.41
AL928654.4-205ENST00000550554 RIMBP3CA6NJZ7 1639 aa30.07■■■□□ 2.4
AL928654.4-205ENST00000550554 RIMBP3BA6NNM3 1639 aa30.07■■■□□ 2.4
AL928654.4-205ENST00000550554 RIMBP3Q9UFD9 1639 aa30.07■■■□□ 2.4
AL928654.4-205ENST00000550554 TARBP1Q13395 1621 aaKnown RBP30.04■■■□□ 2.4
AL928654.4-205ENST00000550554 AQRO60306 1485 aaKnown RBP eCLIP29.99■■■□□ 2.39
AL928654.4-205ENST00000550554 CHD1O14646 1710 aa29.97■■■□□ 2.39
AL928654.4-205ENST00000550554 POLA1P09884 1462 aaPredicted RBP29.97■■■□□ 2.39
AL928654.4-205ENST00000550554 ARHGEF11O15085 1522 aa29.92■■■□□ 2.38
AL928654.4-205ENST00000550554 RAD54L2Q9Y4B4 1467 aa29.88■■■□□ 2.37
AL928654.4-205ENST00000550554 FBLN2P98095 1184 aa29.86■■■□□ 2.37
AL928654.4-205ENST00000550554 SOGA1O94964 1423 aa29.85■■■□□ 2.37
AL928654.4-205ENST00000550554 FGD5Q6ZNL6 1462 aa29.8■■■□□ 2.36
AL928654.4-205ENST00000550554 TDRD9Q8NDG6 1382 aaKnown RBP29.79■■■□□ 2.36
AL928654.4-205ENST00000550554 CUX1P39880 1505 aa29.76■■■□□ 2.35
AL928654.4-205ENST00000550554 CYB5RLQ6IPT4 315 aa29.74■■■□□ 2.35
AL928654.4-205ENST00000550554 WDR97A6NE52 1622 aa29.71■■■□□ 2.35
AL928654.4-205ENST00000550554 SNAPC4Q5SXM2 1469 aa29.69■■■□□ 2.34
AL928654.4-205ENST00000550554 SUPT5HO00267 1087 aaKnown RBP29.65■■■□□ 2.34
AL928654.4-205ENST00000550554 ARAP1Q96P48 1450 aa29.61■■■□□ 2.33
AL928654.4-205ENST00000550554 CHMP7Q8WUX9 453 aaPredicted RBP29.61■■■□□ 2.33
AL928654.4-205ENST00000550554 GRIN2BQ13224 1484 aa29.59■■■□□ 2.33
AL928654.4-205ENST00000550554 MAGI1Q96QZ7 1491 aaPredicted RBP29.59■■■□□ 2.33
AL928654.4-205ENST00000550554 PBRM1Q86U86 1689 aa29.56■■■□□ 2.32
AL928654.4-205ENST00000550554 SYNJ1O43426 1573 aa29.55■■■□□ 2.32
AL928654.4-205ENST00000550554 CLASP1Q7Z460 1538 aa29.53■■■□□ 2.32
AL928654.4-205ENST00000550554 GAPVD1Q14C86 1478 aa29.49■■■□□ 2.31
AL928654.4-205ENST00000550554 SYNJ2O15056 1496 aa29.48■■■□□ 2.31
AL928654.4-205ENST00000550554 TRHP20396 242 aaPredicted RBP29.47■■■□□ 2.31
AL928654.4-205ENST00000550554 ABCA10Q8WWZ4 1543 aa29.43■■■□□ 2.3
AL928654.4-205ENST00000550554 ABCA5Q8WWZ7 1642 aa29.41■■■□□ 2.3
AL928654.4-205ENST00000550554 WRNQ14191 1432 aaPredicted RBP eCLIP29.3■■■□□ 2.28
AL928654.4-205ENST00000550554 BIVM-ERCC5R4GMW8 1640 aa29.29■■■□□ 2.28
AL928654.4-205ENST00000550554 TOP2BQ02880 1626 aa29.27■■■□□ 2.28
AL928654.4-205ENST00000550554 GRIN2AQ12879 1464 aa29.21■■■□□ 2.27
AL928654.4-205ENST00000550554 ADAMTS12P58397 1594 aa29.2■■■□□ 2.26
AL928654.4-205ENST00000550554 CEP170Q5SW79 1584 aa29.12■■■□□ 2.25
AL928654.4-205ENST00000550554 FHAD1B1AJZ9 1412 aa29.1■■■□□ 2.25
AL928654.4-205ENST00000550554 ERCC6L2Q5T890 1561 aa29.09■■■□□ 2.25
AL928654.4-205ENST00000550554 NUP160Q12769 1436 aa29.09■■■□□ 2.25
AL928654.4-205ENST00000550554 ERICH3Q5RHP9 1530 aa29.07■■■□□ 2.24
AL928654.4-205ENST00000550554 SHROOM2Q13796 1616 aa28.99■■■□□ 2.23
AL928654.4-205ENST00000550554 PRG4Q92954 1404 aaPredicted RBP28.85■■■□□ 2.21
AL928654.4-205ENST00000550554 JPH4Q96JJ6 628 aa28.83■■■□□ 2.21
AL928654.4-205ENST00000550554 RUSC2Q8N2Y8 1516 aa28.79■■■□□ 2.2
AL928654.4-205ENST00000550554 KIF13AQ9H1H9 1805 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms