RNA–Protein interactions for RNA: ENST00000550268.2

AC027288.3-202, humanhuman

TSL 2 BASIC

Gene AC027288.3, Length 1,820 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027288.3-202ENST00000550268 NISCHQ9Y2I1 1504 aa30.16■■■□□ 2.42
AC027288.3-202ENST00000550268 CCDC180Q9P1Z9 1646 aa26.87■■□□□ 1.89
AC027288.3-202ENST00000550268 ABCC9O60706 1549 aa26.61■■□□□ 1.85
AC027288.3-202ENST00000550268 ZCCHC6Q5VYS8 1495 aaKnown RBP25.54■■□□□ 1.68
AC027288.3-202ENST00000550268 RB1CC1Q8TDY2 1594 aa25.47■■□□□ 1.67
AC027288.3-202ENST00000550268 NACADO15069 1562 aa25.33■■□□□ 1.65
AC027288.3-202ENST00000550268 DCAF8L2P0C7V8 631 aa25.09■■□□□ 1.61
AC027288.3-202ENST00000550268 DCAF1Q9Y4B6 1507 aa25.07■■□□□ 1.6
AC027288.3-202ENST00000550268 MYO15BQ96JP2 1530 aa25.03■■□□□ 1.6
AC027288.3-202ENST00000550268 SHROOM4Q9ULL8 1493 aa25.03■■□□□ 1.6
AC027288.3-202ENST00000550268 AEBP2Q6ZN18 517 aaPredicted RBP25.02■■□□□ 1.6
AC027288.3-202ENST00000550268 UNC13AQ9UPW8 1703 aa24.89■■□□□ 1.58
AC027288.3-202ENST00000550268 DNAJC5BQ9UF47 199 aa24.77■■□□□ 1.56
AC027288.3-202ENST00000550268 PABPN1Q86U42 306 aaKnown RBP eCLIP24.75■■□□□ 1.55
AC027288.3-202ENST00000550268 BICRAQ9NZM4 1560 aa24.68■■□□□ 1.54
AC027288.3-202ENST00000550268 SUPT5HO00267 1087 aaKnown RBP24.6■■□□□ 1.53
AC027288.3-202ENST00000550268 SCRIBQ14160 1630 aa24.4■■□□□ 1.5
AC027288.3-202ENST00000550268 CHIC1Q5VXU3 224 aa24.19■■□□□ 1.46
AC027288.3-202ENST00000550268 CC2D2AQ9P2K1 1620 aa24.08■■□□□ 1.45
AC027288.3-202ENST00000550268 EIF4G1Q04637 1599 aaKnown RBP24.07■■□□□ 1.44
AC027288.3-202ENST00000550268 CECR2Q9BXF3 1484 aa23.97■■□□□ 1.43
AC027288.3-202ENST00000550268 RSF1Q96T23 1441 aaPredicted RBP23.73■■□□□ 1.39
AC027288.3-202ENST00000550268 HRCP23327 699 aa23.43■■□□□ 1.34
AC027288.3-202ENST00000550268 NCAPD3P42695 1498 aa23.34■■□□□ 1.33
AC027288.3-202ENST00000550268 SMARCA4P51532 1647 aa23.32■■□□□ 1.32
AC027288.3-202ENST00000550268 ATAD2BQ9ULI0 1458 aa23.28■■□□□ 1.32
AC027288.3-202ENST00000550268 MROH2BQ7Z745 1585 aa23.27■■□□□ 1.32
AC027288.3-202ENST00000550268 SMARCA2P51531 1590 aa23.27■■□□□ 1.32
AC027288.3-202ENST00000550268 BAZ1AQ9NRL2 1556 aaPredicted RBP23.23■■□□□ 1.31
AC027288.3-202ENST00000550268 HMGXB3Q12766 1538 aa23.22■■□□□ 1.31
AC027288.3-202ENST00000550268 LOC105371045A0A1W2PR82 267 aa23.18■■□□□ 1.3
AC027288.3-202ENST00000550268 PCGF6Q9BYE7 350 aa23.17■■□□□ 1.3
AC027288.3-202ENST00000550268 TRIM41Q8WV44 630 aa23.16■■□□□ 1.3
AC027288.3-202ENST00000550268 WIZO95785 1651 aa23.14■■□□□ 1.29
AC027288.3-202ENST00000550268 PEG3Q9GZU2 1588 aa23.1■■□□□ 1.29
AC027288.3-202ENST00000550268 TRIM26Q12899 539 aaPredicted RBP23.08■■□□□ 1.28
AC027288.3-202ENST00000550268 BAZ1BQ9UIG0 1483 aaKnown RBP23.08■■□□□ 1.28
AC027288.3-202ENST00000550268 TOP2AP11388 1531 aaKnown RBP23■■□□□ 1.27
AC027288.3-202ENST00000550268 ERCC6Q03468 1493 aa22.99■■□□□ 1.27
AC027288.3-202ENST00000550268 CUX2O14529 1486 aa22.95■■□□□ 1.26
AC027288.3-202ENST00000550268 NESP48681 1621 aa22.89■■□□□ 1.25
AC027288.3-202ENST00000550268 LAMC3Q9Y6N6 1575 aa22.83■■□□□ 1.25
AC027288.3-202ENST00000550268 ZEB1P37275 1124 aaPredicted RBP22.78■■□□□ 1.24
AC027288.3-202ENST00000550268 CCDC88BA6NC98 1476 aa22.72■■□□□ 1.23
AC027288.3-202ENST00000550268 DNAJC5Q9H3Z4 198 aa22.71■■□□□ 1.23
AC027288.3-202ENST00000550268 THOC2Q8NI27 1593 aaKnown RBP22.7■■□□□ 1.22
AC027288.3-202ENST00000550268 PDS5BQ9NTI5 1447 aa22.67■■□□□ 1.22
AC027288.3-202ENST00000550268 KIF21AQ7Z4S6 1674 aa22.67■■□□□ 1.22
AC027288.3-202ENST00000550268 EEA1Q15075 1411 aa22.63■■□□□ 1.21
AC027288.3-202ENST00000550268 CADPSQ9ULU8 1353 aa22.62■■□□□ 1.21
AC027288.3-202ENST00000550268 FAM9AQ8IZU1 332 aaPredicted RBP22.62■■□□□ 1.21
AC027288.3-202ENST00000550268 PPARGC1BQ86YN6 1023 aaKnown RBP22.5■■□□□ 1.19
AC027288.3-202ENST00000550268 WRNQ14191 1432 aaPredicted RBP eCLIP22.5■■□□□ 1.19
AC027288.3-202ENST00000550268 ABCC8Q09428 1581 aa22.48■■□□□ 1.19
AC027288.3-202ENST00000550268 MRC2Q9UBG0 1479 aa22.47■■□□□ 1.19
AC027288.3-202ENST00000550268 WDR62O43379 1518 aa22.42■■□□□ 1.18
AC027288.3-202ENST00000550268 TNIKQ9UKE5 1360 aa22.41■■□□□ 1.18
AC027288.3-202ENST00000550268 CFTRP13569 1480 aa22.4■■□□□ 1.18
AC027288.3-202ENST00000550268 CEP164Q9UPV0 1460 aa22.4■■□□□ 1.18
AC027288.3-202ENST00000550268 FANCD2Q9BXW9 1451 aa22.37■■□□□ 1.17
AC027288.3-202ENST00000550268 PRDM2Q13029 1718 aa22.3■■□□□ 1.16
AC027288.3-202ENST00000550268 CEP162Q5TB80 1403 aa22.28■■□□□ 1.16
AC027288.3-202ENST00000550268 CSRNP3Q8WYN3 585 aa22.28■■□□□ 1.16
AC027288.3-202ENST00000550268 SOGA1O94964 1423 aa22.27■■□□□ 1.16
AC027288.3-202ENST00000550268 GOLGA3Q08378 1498 aa22.27■■□□□ 1.16
AC027288.3-202ENST00000550268 KIF21BO75037 1637 aa22.24■■□□□ 1.15
AC027288.3-202ENST00000550268 URB2Q14146 1524 aaKnown RBP22.17■■□□□ 1.14
AC027288.3-202ENST00000550268 SYNJ1O43426 1573 aa22.15■■□□□ 1.14
AC027288.3-202ENST00000550268 EHMT2Q96KQ7 1210 aa22.14■■□□□ 1.13
AC027288.3-202ENST00000550268 RUSC2Q8N2Y8 1516 aa22.11■■□□□ 1.13
AC027288.3-202ENST00000550268 TOP2BQ02880 1626 aa22.07■■□□□ 1.12
AC027288.3-202ENST00000550268 BIVM-ERCC5R4GMW8 1640 aa22.06■■□□□ 1.12
AC027288.3-202ENST00000550268 UBTFP17480 764 aaKnown RBP22■■□□□ 1.11
AC027288.3-202ENST00000550268 TOPBP1Q92547 1522 aa21.97■■□□□ 1.11
AC027288.3-202ENST00000550268 IFT140Q96RY7 1462 aa21.96■■□□□ 1.11
AC027288.3-202ENST00000550268 DNMBPQ6XZF7 1577 aa21.94■■□□□ 1.1
AC027288.3-202ENST00000550268 ERICH3Q5RHP9 1530 aa21.93■■□□□ 1.1
AC027288.3-202ENST00000550268 CCER1Q8TC90 406 aaPredicted RBP21.91■■□□□ 1.1
AC027288.3-202ENST00000550268 CLIP1P30622 1438 aa21.9■■□□□ 1.1
AC027288.3-202ENST00000550268 VPS8Q8N3P4 1428 aa21.89■■□□□ 1.09
AC027288.3-202ENST00000550268 SLC24A1O60721 1099 aa21.89■■□□□ 1.09
AC027288.3-202ENST00000550268 OSCARQ8IYS5 282 aa21.86■■□□□ 1.09
AC027288.3-202ENST00000550268 ZNF608Q9ULD9 1512 aaPredicted RBP21.85■■□□□ 1.09
AC027288.3-202ENST00000550268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.82■■□□□ 1.08
AC027288.3-202ENST00000550268 PRXQ9BXM0 1461 aa21.8■■□□□ 1.08
AC027288.3-202ENST00000550268 RAPGEF2Q9Y4G8 1499 aa21.8■■□□□ 1.08
AC027288.3-202ENST00000550268 EIF4G3O43432 1585 aaKnown RBP21.79■■□□□ 1.08
AC027288.3-202ENST00000550268 TARBP1Q13395 1621 aaKnown RBP21.78■■□□□ 1.08
AC027288.3-202ENST00000550268 POLA1P09884 1462 aaPredicted RBP21.74■■□□□ 1.07
AC027288.3-202ENST00000550268 CUX1P39880 1505 aa21.72■■□□□ 1.07
AC027288.3-202ENST00000550268 KIF27Q86VH2 1401 aa21.68■■□□□ 1.06
AC027288.3-202ENST00000550268 AQRO60306 1485 aaKnown RBP eCLIP21.66■■□□□ 1.06
AC027288.3-202ENST00000550268 APLP2Q06481 763 aa21.65■■□□□ 1.06
AC027288.3-202ENST00000550268 WDR97A6NE52 1622 aa21.64■■□□□ 1.05
AC027288.3-202ENST00000550268 RAD54L2Q9Y4B4 1467 aa21.64■■□□□ 1.05
AC027288.3-202ENST00000550268 FGD5Q6ZNL6 1462 aa21.63■■□□□ 1.05
AC027288.3-202ENST00000550268 CHD1O14646 1710 aa21.63■■□□□ 1.05
AC027288.3-202ENST00000550268 RIMBP3CA6NJZ7 1639 aa21.6■■□□□ 1.05
AC027288.3-202ENST00000550268 RIMBP3BA6NNM3 1639 aa21.6■■□□□ 1.05
AC027288.3-202ENST00000550268 RIMBP3Q9UFD9 1639 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms