RNA–Protein interactions for RNA: ENST00000550035.1

AC025254.1-201, humanhuman

TSL 5 BASIC

Gene AC025254.1, Length 247 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025254.1-201ENST00000550035 AEBP2Q6ZN18 517 aaPredicted RBP11.87□□□□□ -0.51
AC025254.1-201ENST00000550035 CHIC1Q5VXU3 224 aa11.41□□□□□ -0.58
AC025254.1-201ENST00000550035 SENP3Q9H4L4 574 aaPredicted RBP10.25□□□□□ -0.77
AC025254.1-201ENST00000550035 PHF23Q9BUL5 403 aaPredicted RBP10.07□□□□□ -0.8
AC025254.1-201ENST00000550035 FOXD1Q16676 465 aa9.46□□□□□ -0.9
AC025254.1-201ENST00000550035 NISCHQ9Y2I1 1504 aa9.3□□□□□ -0.92
AC025254.1-201ENST00000550035 PLPPR3Q6T4P5 718 aa9.21□□□□□ -0.94
AC025254.1-201ENST00000550035 POTEDQ86YR6 584 aa8.96□□□□□ -0.98
AC025254.1-201ENST00000550035 MSH5O43196 834 aa8.94□□□□□ -0.98
AC025254.1-201ENST00000550035 PIAS4Q8N2W9 510 aaPredicted RBP8.93□□□□□ -0.98
AC025254.1-201ENST00000550035 ADRA2BP18089 450 aa8.86□□□□□ -0.99
AC025254.1-201ENST00000550035 PPP6R1Q9UPN7 881 aa8.84□□□□□ -0.99
AC025254.1-201ENST00000550035 ABCC9O60706 1549 aa8.56□□□□□ -1.04
AC025254.1-201ENST00000550035 CCDC180Q9P1Z9 1646 aa8.38□□□□□ -1.07
AC025254.1-201ENST00000550035 SCAF1Q9H7N4 1312 aaKnown RBP8.25□□□□□ -1.09
AC025254.1-201ENST00000550035 DNAJC5BQ9UF47 199 aa8.23□□□□□ -1.09
AC025254.1-201ENST00000550035 MAPK8IP2Q13387 824 aaPredicted RBP8.1□□□□□ -1.11
AC025254.1-201ENST00000550035 DMRT2Q9Y5R5 561 aa8.1□□□□□ -1.11
AC025254.1-201ENST00000550035 RB1CC1Q8TDY2 1594 aa8.09□□□□□ -1.11
AC025254.1-201ENST00000550035 PPP4R3CPQ6ZMV5 832 aa8.04□□□□□ -1.12
AC025254.1-201ENST00000550035 NACADO15069 1562 aa8.01□□□□□ -1.13
AC025254.1-201ENST00000550035 PABPN1Q86U42 306 aaKnown RBP eCLIP7.97□□□□□ -1.13
AC025254.1-201ENST00000550035 DCAF8L2P0C7V8 631 aa7.93□□□□□ -1.14
AC025254.1-201ENST00000550035 CNKSR2Q8WXI2 1034 aa7.9□□□□□ -1.14
AC025254.1-201ENST00000550035 MYO15BQ96JP2 1530 aa7.88□□□□□ -1.15
AC025254.1-201ENST00000550035 DCAF8L1A6NGE4 600 aa7.85□□□□□ -1.15
AC025254.1-201ENST00000550035 NCBP3Q53F19 620 aaKnown RBP7.84□□□□□ -1.15
AC025254.1-201ENST00000550035 BICRAQ9NZM4 1560 aa7.84□□□□□ -1.15
AC025254.1-201ENST00000550035 UNC13AQ9UPW8 1703 aa7.81□□□□□ -1.16
AC025254.1-201ENST00000550035 HOXD11P31277 338 aaPredicted RBP7.81□□□□□ -1.16
AC025254.1-201ENST00000550035 RNF216Q9NWF9 866 aaPredicted RBP7.8□□□□□ -1.16
AC025254.1-201ENST00000550035 SHROOM4Q9ULL8 1493 aa7.78□□□□□ -1.16
AC025254.1-201ENST00000550035 CECR2Q9BXF3 1484 aa7.75□□□□□ -1.17
AC025254.1-201ENST00000550035 DNAJC5Q9H3Z4 198 aa7.74□□□□□ -1.17
AC025254.1-201ENST00000550035 CC2D2AQ9P2K1 1620 aa7.72□□□□□ -1.17
AC025254.1-201ENST00000550035 DCAF1Q9Y4B6 1507 aa7.69□□□□□ -1.18
AC025254.1-201ENST00000550035 EIF4G1Q04637 1599 aaKnown RBP7.67□□□□□ -1.18
AC025254.1-201ENST00000550035 ZCCHC6Q5VYS8 1495 aaKnown RBP7.65□□□□□ -1.18
AC025254.1-201ENST00000550035 NPM3O75607 178 aaKnown RBP7.62□□□□□ -1.19
AC025254.1-201ENST00000550035 CACNB1Q02641 598 aaPredicted RBP7.62□□□□□ -1.19
AC025254.1-201ENST00000550035 SCRIBQ14160 1630 aa7.6□□□□□ -1.19
AC025254.1-201ENST00000550035 RNF39Q9H2S5 420 aa7.56□□□□□ -1.2
AC025254.1-201ENST00000550035 KCNA4P22459 653 aa7.52□□□□□ -1.21
AC025254.1-201ENST00000550035 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.52□□□□□ -1.21
AC025254.1-201ENST00000550035 C1QBPQ07021 282 aaKnown RBP7.5□□□□□ -1.21
AC025254.1-201ENST00000550035 CUX2O14529 1486 aa7.49□□□□□ -1.21
AC025254.1-201ENST00000550035 NCAPD3P42695 1498 aa7.43□□□□□ -1.22
AC025254.1-201ENST00000550035 ERCC6Q03468 1493 aa7.42□□□□□ -1.22
AC025254.1-201ENST00000550035 ATAD2BQ9ULI0 1458 aa7.35□□□□□ -1.23
AC025254.1-201ENST00000550035 SMARCA2P51531 1590 aa7.31□□□□□ -1.24
AC025254.1-201ENST00000550035 HMGXB3Q12766 1538 aa7.31□□□□□ -1.24
AC025254.1-201ENST00000550035 NESP48681 1621 aa7.3□□□□□ -1.24
AC025254.1-201ENST00000550035 U3KPZ7 1027 aaPredicted RBP7.29□□□□□ -1.24
AC025254.1-201ENST00000550035 APLP2Q06481 763 aa7.26□□□□□ -1.25
AC025254.1-201ENST00000550035 TRIM41Q8WV44 630 aa7.26□□□□□ -1.25
AC025254.1-201ENST00000550035 BAZ1BQ9UIG0 1483 aaKnown RBP7.25□□□□□ -1.25
AC025254.1-201ENST00000550035 SMARCA4P51532 1647 aa7.25□□□□□ -1.25
AC025254.1-201ENST00000550035 PDS5BQ9NTI5 1447 aa7.25□□□□□ -1.25
AC025254.1-201ENST00000550035 THOC2Q8NI27 1593 aaKnown RBP7.25□□□□□ -1.25
AC025254.1-201ENST00000550035 LAMC3Q9Y6N6 1575 aa7.25□□□□□ -1.25
AC025254.1-201ENST00000550035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.23□□□□□ -1.25
AC025254.1-201ENST00000550035 CAPN15O75808 1086 aa7.23□□□□□ -1.25
AC025254.1-201ENST00000550035 HNRNPUL2Q1KMD3 747 aaKnown RBP7.23□□□□□ -1.25
AC025254.1-201ENST00000550035 PEG3Q9GZU2 1588 aa7.22□□□□□ -1.25
AC025254.1-201ENST00000550035 BAZ1AQ9NRL2 1556 aaPredicted RBP7.22□□□□□ -1.25
AC025254.1-201ENST00000550035 SLC4A2P04920 1241 aa7.22□□□□□ -1.25
AC025254.1-201ENST00000550035 CADPSQ9ULU8 1353 aa7.19□□□□□ -1.26
AC025254.1-201ENST00000550035 SAMD1Q6SPF0 538 aaPredicted RBP7.17□□□□□ -1.26
AC025254.1-201ENST00000550035 SLC4A1APQ9BWU0 796 aaKnown RBP7.17□□□□□ -1.26
AC025254.1-201ENST00000550035 OSCARQ8IYS5 282 aa7.16□□□□□ -1.26
AC025254.1-201ENST00000550035 SPINK5Q9NQ38 1064 aaPredicted RBP7.16□□□□□ -1.26
AC025254.1-201ENST00000550035 MRC2Q9UBG0 1479 aa7.16□□□□□ -1.26
AC025254.1-201ENST00000550035 WDR62O43379 1518 aa7.14□□□□□ -1.27
AC025254.1-201ENST00000550035 KIF21AQ7Z4S6 1674 aa7.14□□□□□ -1.27
AC025254.1-201ENST00000550035 MROH2BQ7Z745 1585 aa7.13□□□□□ -1.27
AC025254.1-201ENST00000550035 ZNF219Q9P2Y4 722 aaPredicted RBP7.13□□□□□ -1.27
AC025254.1-201ENST00000550035 MYCNP04198 464 aaPredicted RBP7.11□□□□□ -1.27
AC025254.1-201ENST00000550035 TRHP20396 242 aaPredicted RBP7.11□□□□□ -1.27
AC025254.1-201ENST00000550035 DSG3P32926 999 aa7.09□□□□□ -1.27
AC025254.1-201ENST00000550035 CEP164Q9UPV0 1460 aa7.09□□□□□ -1.27
AC025254.1-201ENST00000550035 FANCD2Q9BXW9 1451 aa7.07□□□□□ -1.28
AC025254.1-201ENST00000550035 FOXD4L1Q9NU39 408 aa7.06□□□□□ -1.28
AC025254.1-201ENST00000550035 CFTRP13569 1480 aa7.05□□□□□ -1.28
AC025254.1-201ENST00000550035 ABCB7O75027 752 aa7.03□□□□□ -1.28
AC025254.1-201ENST00000550035 URB2Q14146 1524 aaKnown RBP7.01□□□□□ -1.29
AC025254.1-201ENST00000550035 WIZO95785 1651 aa7□□□□□ -1.29
AC025254.1-201ENST00000550035 RIMBP3CA6NJZ7 1639 aa6.99□□□□□ -1.29
AC025254.1-201ENST00000550035 RIMBP3BA6NNM3 1639 aa6.99□□□□□ -1.29
AC025254.1-201ENST00000550035 RIMBP3Q9UFD9 1639 aa6.99□□□□□ -1.29
AC025254.1-201ENST00000550035 ARHGEF11O15085 1522 aa6.98□□□□□ -1.29
AC025254.1-201ENST00000550035 CYB5RLQ6IPT4 315 aa6.98□□□□□ -1.29
AC025254.1-201ENST00000550035 IFT140Q96RY7 1462 aa6.98□□□□□ -1.29
AC025254.1-201ENST00000550035 RSF1Q96T23 1441 aaPredicted RBP6.95□□□□□ -1.3
AC025254.1-201ENST00000550035 ZNF608Q9ULD9 1512 aaPredicted RBP6.95□□□□□ -1.3
AC025254.1-201ENST00000550035 POTEHQ6S545 545 aa6.94□□□□□ -1.3
AC025254.1-201ENST00000550035 TOP2AP11388 1531 aaKnown RBP6.94□□□□□ -1.3
AC025254.1-201ENST00000550035 ABCC8Q09428 1581 aa6.93□□□□□ -1.3
AC025254.1-201ENST00000550035 TOPBP1Q92547 1522 aa6.91□□□□□ -1.3
AC025254.1-201ENST00000550035 POLA2Q14181 598 aa6.91□□□□□ -1.3
AC025254.1-201ENST00000550035 ARAP1Q96P48 1450 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms