RNA–Protein interactions for RNA: ENST00000550024.1

AL110292.1-201, humanhuman

TSL 3 BASIC

Gene AL110292.1, Length 477 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL110292.1-201ENST00000550024 AEBP2Q6ZN18 517 aaPredicted RBP31.7■■■□□ 2.67
AL110292.1-201ENST00000550024 CHIC1Q5VXU3 224 aa29.94■■■□□ 2.38
AL110292.1-201ENST00000550024 SENP3Q9H4L4 574 aaPredicted RBP27.17■■□□□ 1.94
AL110292.1-201ENST00000550024 PHF23Q9BUL5 403 aaPredicted RBP26.76■■□□□ 1.87
AL110292.1-201ENST00000550024 FOXD1Q16676 465 aa25.29■■□□□ 1.64
AL110292.1-201ENST00000550024 PLPPR3Q6T4P5 718 aa23.87■■□□□ 1.41
AL110292.1-201ENST00000550024 MSH5O43196 834 aa23.84■■□□□ 1.41
AL110292.1-201ENST00000550024 PIAS4Q8N2W9 510 aaPredicted RBP23.63■■□□□ 1.37
AL110292.1-201ENST00000550024 POTEDQ86YR6 584 aa23.58■■□□□ 1.37
AL110292.1-201ENST00000550024 PPP6R1Q9UPN7 881 aa23.45■■□□□ 1.34
AL110292.1-201ENST00000550024 ADRA2BP18089 450 aa23.39■■□□□ 1.33
AL110292.1-201ENST00000550024 NISCHQ9Y2I1 1504 aa22.37■■□□□ 1.17
AL110292.1-201ENST00000550024 MAPK8IP2Q13387 824 aaPredicted RBP21.54■■□□□ 1.04
AL110292.1-201ENST00000550024 SCAF1Q9H7N4 1312 aaKnown RBP21.53■■□□□ 1.04
AL110292.1-201ENST00000550024 DMRT2Q9Y5R5 561 aa21.48■■□□□ 1.03
AL110292.1-201ENST00000550024 PPP4R3CPQ6ZMV5 832 aa20.87■□□□□ 0.93
AL110292.1-201ENST00000550024 DCAF8L1A6NGE4 600 aa20.68■□□□□ 0.9
AL110292.1-201ENST00000550024 CACNB1Q02641 598 aaPredicted RBP20.6■□□□□ 0.89
AL110292.1-201ENST00000550024 HOXD11P31277 338 aaPredicted RBP20.59■□□□□ 0.89
AL110292.1-201ENST00000550024 CNKSR2Q8WXI2 1034 aa20.55■□□□□ 0.88
AL110292.1-201ENST00000550024 RNF216Q9NWF9 866 aaPredicted RBP20.41■□□□□ 0.86
AL110292.1-201ENST00000550024 RNF39Q9H2S5 420 aa20.26■□□□□ 0.83
AL110292.1-201ENST00000550024 NCBP3Q53F19 620 aaKnown RBP20.07■□□□□ 0.8
AL110292.1-201ENST00000550024 C1QBPQ07021 282 aaKnown RBP20■□□□□ 0.79
AL110292.1-201ENST00000550024 CCDC180Q9P1Z9 1646 aa19.96■□□□□ 0.79
AL110292.1-201ENST00000550024 DNAJC5BQ9UF47 199 aa19.96■□□□□ 0.79
AL110292.1-201ENST00000550024 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.69■□□□□ 0.74
AL110292.1-201ENST00000550024 NPM3O75607 178 aaKnown RBP19.68■□□□□ 0.74
AL110292.1-201ENST00000550024 ABCC9O60706 1549 aa19.52■□□□□ 0.72
AL110292.1-201ENST00000550024 U3KPZ7 1027 aaPredicted RBP19.18■□□□□ 0.66
AL110292.1-201ENST00000550024 KCNA4P22459 653 aa19.1■□□□□ 0.65
AL110292.1-201ENST00000550024 CAPN15O75808 1086 aa19.02■□□□□ 0.64
AL110292.1-201ENST00000550024 SPINK5Q9NQ38 1064 aaPredicted RBP18.97■□□□□ 0.63
AL110292.1-201ENST00000550024 DSG3P32926 999 aa18.91■□□□□ 0.62
AL110292.1-201ENST00000550024 SLC4A2P04920 1241 aa18.83■□□□□ 0.6
AL110292.1-201ENST00000550024 RB1CC1Q8TDY2 1594 aa18.8■□□□□ 0.6
AL110292.1-201ENST00000550024 APLP2Q06481 763 aa18.76■□□□□ 0.59
AL110292.1-201ENST00000550024 DCAF8L2P0C7V8 631 aa18.73■□□□□ 0.59
AL110292.1-201ENST00000550024 NACADO15069 1562 aa18.72■□□□□ 0.59
AL110292.1-201ENST00000550024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.66■□□□□ 0.58
AL110292.1-201ENST00000550024 TRHP20396 242 aaPredicted RBP18.66■□□□□ 0.58
AL110292.1-201ENST00000550024 HNRNPUL2Q1KMD3 747 aaKnown RBP18.66■□□□□ 0.58
AL110292.1-201ENST00000550024 ZCCHC6Q5VYS8 1495 aaKnown RBP18.65■□□□□ 0.58
AL110292.1-201ENST00000550024 ZNF219Q9P2Y4 722 aaPredicted RBP18.63■□□□□ 0.57
AL110292.1-201ENST00000550024 MYO15BQ96JP2 1530 aa18.56■□□□□ 0.56
AL110292.1-201ENST00000550024 SAMD1Q6SPF0 538 aaPredicted RBP18.52■□□□□ 0.56
AL110292.1-201ENST00000550024 ABCB7O75027 752 aa18.51■□□□□ 0.55
AL110292.1-201ENST00000550024 DCAF1Q9Y4B6 1507 aa18.49■□□□□ 0.55
AL110292.1-201ENST00000550024 UNC13AQ9UPW8 1703 aa18.48■□□□□ 0.55
AL110292.1-201ENST00000550024 POTEHQ6S545 545 aa18.46■□□□□ 0.55
AL110292.1-201ENST00000550024 MYCNP04198 464 aaPredicted RBP18.26■□□□□ 0.51
AL110292.1-201ENST00000550024 BICRAQ9NZM4 1560 aa18.21■□□□□ 0.51
AL110292.1-201ENST00000550024 PABPN1Q86U42 306 aaKnown RBP eCLIP18.14■□□□□ 0.49
AL110292.1-201ENST00000550024 SCRIBQ14160 1630 aa18.12■□□□□ 0.49
AL110292.1-201ENST00000550024 RBM42Q9BTD8 480 aaKnown RBP18.12■□□□□ 0.49
AL110292.1-201ENST00000550024 POLA2Q14181 598 aa18.08■□□□□ 0.48
AL110292.1-201ENST00000550024 SHROOM4Q9ULL8 1493 aa18.04■□□□□ 0.48
AL110292.1-201ENST00000550024 SLC4A1APQ9BWU0 796 aaKnown RBP18.03■□□□□ 0.48
AL110292.1-201ENST00000550024 FOXD4L1Q9NU39 408 aa17.94■□□□□ 0.46
AL110292.1-201ENST00000550024 ATF5Q9Y2D1 282 aaPredicted RBP17.78■□□□□ 0.44
AL110292.1-201ENST00000550024 CHRDL2Q6WN34 429 aa17.76■□□□□ 0.43
AL110292.1-201ENST00000550024 ZBTB12Q9Y330 459 aaPredicted RBP17.75■□□□□ 0.43
AL110292.1-201ENST00000550024 EIF4G1Q04637 1599 aaKnown RBP17.74■□□□□ 0.43
AL110292.1-201ENST00000550024 CC2D2AQ9P2K1 1620 aa17.72■□□□□ 0.43
AL110292.1-201ENST00000550024 AKT1S1Q96B36 256 aa17.63■□□□□ 0.41
AL110292.1-201ENST00000550024 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
AL110292.1-201ENST00000550024 ZBTB22O15209 634 aa17.5■□□□□ 0.39
AL110292.1-201ENST00000550024 OSCARQ8IYS5 282 aa17.49■□□□□ 0.39
AL110292.1-201ENST00000550024 REM2Q8IYK8 340 aaPredicted RBP17.44■□□□□ 0.38
AL110292.1-201ENST00000550024 ATXN8OSP0DMR3 200 aa17.42■□□□□ 0.38
AL110292.1-201ENST00000550024 SMARCA4P51532 1647 aa17.34■□□□□ 0.37
AL110292.1-201ENST00000550024 BAZ1AQ9NRL2 1556 aaPredicted RBP17.31■□□□□ 0.36
AL110292.1-201ENST00000550024 PIP4P2Q8N4L2 257 aa17.27■□□□□ 0.36
AL110292.1-201ENST00000550024 MROH2BQ7Z745 1585 aa17.27■□□□□ 0.35
AL110292.1-201ENST00000550024 SMARCA2P51531 1590 aa17.23■□□□□ 0.35
AL110292.1-201ENST00000550024 PITPNM1O00562 1244 aa17.23■□□□□ 0.35
AL110292.1-201ENST00000550024 FBLN2P98095 1184 aa17.23■□□□□ 0.35
AL110292.1-201ENST00000550024 NCAPD3P42695 1498 aa17.22■□□□□ 0.35
AL110292.1-201ENST00000550024 ATAD2BQ9ULI0 1458 aa17.21■□□□□ 0.35
AL110292.1-201ENST00000550024 SP7Q8TDD2 431 aaPredicted RBP17.21■□□□□ 0.35
AL110292.1-201ENST00000550024 HMGXB3Q12766 1538 aa17.19■□□□□ 0.34
AL110292.1-201ENST00000550024 PEG3Q9GZU2 1588 aa17.17■□□□□ 0.34
AL110292.1-201ENST00000550024 SPDYE2BA6NHP3 402 aa17.15■□□□□ 0.34
AL110292.1-201ENST00000550024 SPDYE6P0CI01 402 aa17.15■□□□□ 0.34
AL110292.1-201ENST00000550024 SPDYE2Q495Y8 402 aa17.15■□□□□ 0.34
AL110292.1-201ENST00000550024 FXR2P51116 673 aaKnown RBP eCLIP17.14■□□□□ 0.33
AL110292.1-201ENST00000550024 RSF1Q96T23 1441 aaPredicted RBP17.12■□□□□ 0.33
AL110292.1-201ENST00000550024 WIZO95785 1651 aa17.09■□□□□ 0.33
AL110292.1-201ENST00000550024 BAZ1BQ9UIG0 1483 aaKnown RBP17.08■□□□□ 0.32
AL110292.1-201ENST00000550024 HAX1O00165 279 aa17.08■□□□□ 0.32
AL110292.1-201ENST00000550024 MKRN4PQ13434 485 aaPredicted RBP16.94■□□□□ 0.3
AL110292.1-201ENST00000550024 SPDYE1Q8NFV5 336 aaPredicted RBP16.93■□□□□ 0.3
AL110292.1-201ENST00000550024 ZNF692Q9BU19 519 aaPredicted RBP16.92■□□□□ 0.3
AL110292.1-201ENST00000550024 CLEC11AQ9Y240 323 aa16.91■□□□□ 0.3
AL110292.1-201ENST00000550024 TOP2AP11388 1531 aaKnown RBP16.88■□□□□ 0.29
AL110292.1-201ENST00000550024 LAMC3Q9Y6N6 1575 aa16.86■□□□□ 0.29
AL110292.1-201ENST00000550024 ERCC6Q03468 1493 aa16.86■□□□□ 0.29
AL110292.1-201ENST00000550024 NESP48681 1621 aa16.85■□□□□ 0.29
AL110292.1-201ENST00000550024 SSUH2Q9Y2M2 353 aa16.85■□□□□ 0.29
AL110292.1-201ENST00000550024 SUPT5HO00267 1087 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms