RNA–Protein interactions for RNA: ENST00000549938.5

TMPO-209, Transcript of thymopoietin, humanhuman

TSL 4

Gene TMPO, Length 696 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPO-209ENST00000549938 NISCHQ9Y2I1 1504 aa52.28■■■■■ 5.96
TMPO-209ENST00000549938 ABCC9O60706 1549 aa46.73■■■■■ 5.07
TMPO-209ENST00000549938 CCDC180Q9P1Z9 1646 aa46.71■■■■■ 5.07
TMPO-209ENST00000549938 RB1CC1Q8TDY2 1594 aa44.48■■■■■ 4.71
TMPO-209ENST00000549938 DCAF8L2P0C7V8 631 aa44.36■■■■■ 4.69
TMPO-209ENST00000549938 NACADO15069 1562 aa44.2■■■■■ 4.67
TMPO-209ENST00000549938 DNAJC5BQ9UF47 199 aa43.67■■■■■ 4.58
TMPO-209ENST00000549938 PABPN1Q86U42 306 aaKnown RBP eCLIP43.64■■■■■ 4.58
TMPO-209ENST00000549938 MYO15BQ96JP2 1530 aa43.59■■■■■ 4.57
TMPO-209ENST00000549938 ZCCHC6Q5VYS8 1495 aaKnown RBP43.33■■■■■ 4.53
TMPO-209ENST00000549938 UNC13AQ9UPW8 1703 aa43.31■■■■■ 4.52
TMPO-209ENST00000549938 DCAF1Q9Y4B6 1507 aa43.12■■■■■ 4.49
TMPO-209ENST00000549938 BICRAQ9NZM4 1560 aa43.11■■■■■ 4.49
TMPO-209ENST00000549938 SCRIBQ14160 1630 aa42.71■■■■■ 4.43
TMPO-209ENST00000549938 SHROOM4Q9ULL8 1493 aa42.54■■■■■ 4.4
TMPO-209ENST00000549938 CC2D2AQ9P2K1 1620 aa42.13■■■■■ 4.33
TMPO-209ENST00000549938 EIF4G1Q04637 1599 aaKnown RBP42.08■■■■■ 4.33
TMPO-209ENST00000549938 CECR2Q9BXF3 1484 aa42.05■■■■■ 4.32
TMPO-209ENST00000549938 NCAPD3P42695 1498 aa40.83■■■■■ 4.13
TMPO-209ENST00000549938 ATAD2BQ9ULI0 1458 aa40.76■■■■■ 4.12
TMPO-209ENST00000549938 SMARCA4P51532 1647 aa40.71■■■■■ 4.11
TMPO-209ENST00000549938 SMARCA2P51531 1590 aa40.63■■■■■ 4.09
TMPO-209ENST00000549938 BAZ1AQ9NRL2 1556 aaPredicted RBP40.57■■■■■ 4.08
TMPO-209ENST00000549938 HMGXB3Q12766 1538 aa40.49■■■■■ 4.07
TMPO-209ENST00000549938 BAZ1BQ9UIG0 1483 aaKnown RBP40.4■■■■■ 4.06
TMPO-209ENST00000549938 ERCC6Q03468 1493 aa40.37■■■■■ 4.05
TMPO-209ENST00000549938 MROH2BQ7Z745 1585 aa40.3■■■■■ 4.04
TMPO-209ENST00000549938 PEG3Q9GZU2 1588 aa40.25■■■■■ 4.03
TMPO-209ENST00000549938 NESP48681 1621 aa40.16■■■■■ 4.02
TMPO-209ENST00000549938 CUX2O14529 1486 aa40.13■■■■■ 4.01
TMPO-209ENST00000549938 DNAJC5Q9H3Z4 198 aa39.98■■■■□ 3.99
TMPO-209ENST00000549938 LAMC3Q9Y6N6 1575 aa39.84■■■■□ 3.97
TMPO-209ENST00000549938 WIZO95785 1651 aa39.8■■■■□ 3.96
TMPO-209ENST00000549938 PDS5BQ9NTI5 1447 aa39.73■■■■□ 3.95
TMPO-209ENST00000549938 CADPSQ9ULU8 1353 aa39.67■■■■□ 3.94
TMPO-209ENST00000549938 THOC2Q8NI27 1593 aaKnown RBP39.59■■■■□ 3.93
TMPO-209ENST00000549938 RSF1Q96T23 1441 aaPredicted RBP39.57■■■■□ 3.93
TMPO-209ENST00000549938 KIF21AQ7Z4S6 1674 aa39.54■■■■□ 3.92
TMPO-209ENST00000549938 MRC2Q9UBG0 1479 aa39.31■■■■□ 3.88
TMPO-209ENST00000549938 TOP2AP11388 1531 aaKnown RBP39.31■■■■□ 3.88
TMPO-209ENST00000549938 CEP164Q9UPV0 1460 aa39.22■■■■□ 3.87
TMPO-209ENST00000549938 CFTRP13569 1480 aa39.2■■■■□ 3.87
TMPO-209ENST00000549938 FANCD2Q9BXW9 1451 aa39.19■■■■□ 3.86
TMPO-209ENST00000549938 WDR62O43379 1518 aa39.14■■■■□ 3.86
TMPO-209ENST00000549938 CCDC88BA6NC98 1476 aa38.93■■■■□ 3.82
TMPO-209ENST00000549938 URB2Q14146 1524 aaKnown RBP38.82■■■■□ 3.8
TMPO-209ENST00000549938 PRDM2Q13029 1718 aa38.65■■■■□ 3.78
TMPO-209ENST00000549938 OSCARQ8IYS5 282 aa38.48■■■■□ 3.75
TMPO-209ENST00000549938 TOPBP1Q92547 1522 aa38.45■■■■□ 3.75
TMPO-209ENST00000549938 TRIM41Q8WV44 630 aa38.44■■■■□ 3.74
TMPO-209ENST00000549938 IFT140Q96RY7 1462 aa38.42■■■■□ 3.74
TMPO-209ENST00000549938 ABCC8Q09428 1581 aa38.39■■■■□ 3.74
TMPO-209ENST00000549938 ZNF608Q9ULD9 1512 aaPredicted RBP38.33■■■■□ 3.73
TMPO-209ENST00000549938 DNMBPQ6XZF7 1577 aa38.29■■■■□ 3.72
TMPO-209ENST00000549938 SUPT5HO00267 1087 aaKnown RBP38.19■■■■□ 3.7
TMPO-209ENST00000549938 AQRO60306 1485 aaKnown RBP eCLIP38.07■■■■□ 3.68
TMPO-209ENST00000549938 POLA1P09884 1462 aaPredicted RBP38.07■■■■□ 3.68
TMPO-209ENST00000549938 EIF4G3O43432 1585 aaKnown RBP38.06■■■■□ 3.68
TMPO-209ENST00000549938 TARBP1Q13395 1621 aaKnown RBP38.01■■■■□ 3.68
TMPO-209ENST00000549938 SOGA1O94964 1423 aa37.99■■■■□ 3.67
TMPO-209ENST00000549938 RAD54L2Q9Y4B4 1467 aa37.98■■■■□ 3.67
TMPO-209ENST00000549938 FBLN2P98095 1184 aa37.94■■■■□ 3.66
TMPO-209ENST00000549938 TDRD9Q8NDG6 1382 aaKnown RBP37.91■■■■□ 3.66
TMPO-209ENST00000549938 FGD5Q6ZNL6 1462 aa37.88■■■■□ 3.65
TMPO-209ENST00000549938 CUX1P39880 1505 aa37.85■■■■□ 3.65
TMPO-209ENST00000549938 RIMBP3CA6NJZ7 1639 aa37.78■■■■□ 3.64
TMPO-209ENST00000549938 RIMBP3BA6NNM3 1639 aa37.78■■■■□ 3.64
TMPO-209ENST00000549938 RIMBP3Q9UFD9 1639 aa37.78■■■■□ 3.64
TMPO-209ENST00000549938 CHD1O14646 1710 aa37.72■■■■□ 3.63
TMPO-209ENST00000549938 ARHGEF11O15085 1522 aa37.71■■■■□ 3.63
TMPO-209ENST00000549938 SNAPC4Q5SXM2 1469 aa37.65■■■■□ 3.62
TMPO-209ENST00000549938 CHMP7Q8WUX9 453 aaPredicted RBP37.64■■■■□ 3.62
TMPO-209ENST00000549938 WDR97A6NE52 1622 aa37.62■■■■□ 3.61
TMPO-209ENST00000549938 CYB5RLQ6IPT4 315 aa37.61■■■■□ 3.61
TMPO-209ENST00000549938 GRIN2BQ13224 1484 aa37.58■■■■□ 3.61
TMPO-209ENST00000549938 MAGI1Q96QZ7 1491 aaPredicted RBP37.52■■■■□ 3.6
TMPO-209ENST00000549938 GAPVD1Q14C86 1478 aa37.49■■■■□ 3.59
TMPO-209ENST00000549938 ABCA10Q8WWZ4 1543 aa37.43■■■■□ 3.58
TMPO-209ENST00000549938 SYNJ2O15056 1496 aa37.42■■■■□ 3.58
TMPO-209ENST00000549938 WRNQ14191 1432 aaPredicted RBP eCLIP37.4■■■■□ 3.58
TMPO-209ENST00000549938 SYNJ1O43426 1573 aa37.37■■■■□ 3.57
TMPO-209ENST00000549938 ARAP1Q96P48 1450 aa37.36■■■■□ 3.57
TMPO-209ENST00000549938 PBRM1Q86U86 1689 aa37.32■■■■□ 3.57
TMPO-209ENST00000549938 CLASP1Q7Z460 1538 aa37.31■■■■□ 3.56
TMPO-209ENST00000549938 ABCA5Q8WWZ7 1642 aa37.28■■■■□ 3.56
TMPO-209ENST00000549938 TOP2BQ02880 1626 aa37.25■■■■□ 3.55
TMPO-209ENST00000549938 BIVM-ERCC5R4GMW8 1640 aa37.21■■■■□ 3.55
TMPO-209ENST00000549938 TRHP20396 242 aaPredicted RBP37.18■■■■□ 3.54
TMPO-209ENST00000549938 GRIN2AQ12879 1464 aa37.07■■■■□ 3.53
TMPO-209ENST00000549938 ADAMTS12P58397 1594 aa37.02■■■■□ 3.52
TMPO-209ENST00000549938 FHAD1B1AJZ9 1412 aa37.02■■■■□ 3.52
TMPO-209ENST00000549938 ERICH3Q5RHP9 1530 aa36.95■■■■□ 3.51
TMPO-209ENST00000549938 NUP160Q12769 1436 aa36.92■■■■□ 3.5
TMPO-209ENST00000549938 CEP170Q5SW79 1584 aa36.89■■■■□ 3.5
TMPO-209ENST00000549938 ERCC6L2Q5T890 1561 aa36.78■■■■□ 3.48
TMPO-209ENST00000549938 JPH4Q96JJ6 628 aa36.69■■■■□ 3.46
TMPO-209ENST00000549938 KIF27Q86VH2 1401 aa36.66■■■■□ 3.46
TMPO-209ENST00000549938 SHROOM2Q13796 1616 aa36.65■■■■□ 3.46
TMPO-209ENST00000549938 PRG4Q92954 1404 aaPredicted RBP36.64■■■■□ 3.46
TMPO-209ENST00000549938 IGF1RP08069 1367 aa36.62■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms